RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 CALCOCO1Q9P1Z2 691 aa16.38■□□□□ 0.21
CACNB3-220ENST00000551716 PCOLCE2Q9UKZ9 415 aa16.38■□□□□ 0.21
CACNB3-220ENST00000551716 DENND4CQ5VZ89 1909 aa16.38■□□□□ 0.21
CACNB3-220ENST00000551716 MAST4O15021 2626 aa16.38■□□□□ 0.21
CACNB3-220ENST00000551716 IGHV1OR15-9A0A0B4J2B8 117 aa16.37■□□□□ 0.21
CACNB3-220ENST00000551716 PP2D1A8MPX8 630 aa16.37■□□□□ 0.21
CACNB3-220ENST00000551716 IL18RAPO95256 599 aa16.37■□□□□ 0.21
CACNB3-220ENST00000551716 PLA2G4BP0C869 781 aa16.37■□□□□ 0.21
CACNB3-220ENST00000551716 ZNF883P0CG24 379 aa16.37■□□□□ 0.21
CACNB3-220ENST00000551716 ADH5P11766 374 aa16.37■□□□□ 0.21
CACNB3-220ENST00000551716 GAD2Q05329 585 aa16.37■□□□□ 0.21
CACNB3-220ENST00000551716 HYIQ5T013 277 aa16.37■□□□□ 0.21
CACNB3-220ENST00000551716 VSTM1Q6UX27 236 aa16.37■□□□□ 0.21
CACNB3-220ENST00000551716 SLC41A1Q8IVJ1 513 aa16.37■□□□□ 0.21
CACNB3-220ENST00000551716 MYCT1Q8N699 235 aa16.37■□□□□ 0.21
CACNB3-220ENST00000551716 ZNF513Q8N8E2 541 aaPredicted RBP16.37■□□□□ 0.21
CACNB3-220ENST00000551716 SPRYD3Q8NCJ5 442 aa16.37■□□□□ 0.21
CACNB3-220ENST00000551716 SETD7Q8WTS6 366 aaKnown RBP16.37■□□□□ 0.21
CACNB3-220ENST00000551716 OTUB2Q96DC9 234 aa16.37■□□□□ 0.21
CACNB3-220ENST00000551716 CDK5RAP3Q96JB5 506 aa16.37■□□□□ 0.21
CACNB3-220ENST00000551716 MMTAG2Q9BU76 263 aaKnown RBP16.37■□□□□ 0.21
CACNB3-220ENST00000551716 DEC1Q9P2X7 70 aa16.37■□□□□ 0.21
CACNB3-220ENST00000551716 NFE2L3Q9Y4A8 694 aa16.37■□□□□ 0.21
CACNB3-220ENST00000551716 KIAA1549LQ6ZVL6 1849 aa16.37■□□□□ 0.21
CACNB3-220ENST00000551716 CELSR3Q9NYQ7 3312 aa16.36■□□□□ 0.21
CACNB3-220ENST00000551716 E9PAM4 449 aa16.36■□□□□ 0.21
CACNB3-220ENST00000551716 HOXB2P14652 356 aa16.36■□□□□ 0.21
CACNB3-220ENST00000551716 NTSR1P30989 418 aa16.36■□□□□ 0.21
CACNB3-220ENST00000551716 ZXDBP98169 803 aa16.36■□□□□ 0.21
CACNB3-220ENST00000551716 CYP4F3Q08477 520 aa16.36■□□□□ 0.21
CACNB3-220ENST00000551716 MAPRE1Q15691 268 aaKnown RBP16.36■□□□□ 0.21
CACNB3-220ENST00000551716 IL27RAQ6UWB1 636 aa16.36■□□□□ 0.21
CACNB3-220ENST00000551716 DENND5BQ6ZUT9 1274 aa16.36■□□□□ 0.21
CACNB3-220ENST00000551716 SFTPA1Q8IWL2 248 aa16.36■□□□□ 0.21
CACNB3-220ENST00000551716 FBXO18Q8NFZ0 1043 aa16.36■□□□□ 0.21
CACNB3-220ENST00000551716 CACTINQ8WUQ7 758 aaKnown RBP16.36■□□□□ 0.21
CACNB3-220ENST00000551716 SLC39A7Q92504 469 aa16.36■□□□□ 0.21
CACNB3-220ENST00000551716 PKMYT1Q99640 499 aa16.36■□□□□ 0.21
CACNB3-220ENST00000551716 PARVGQ9HBI0 331 aa16.36■□□□□ 0.21
CACNB3-220ENST00000551716 MAGEC2Q9UBF1 373 aaPredicted RBP16.36■□□□□ 0.21
CACNB3-220ENST00000551716 AGO2Q9UKV8 859 aaKnown RBP16.36■□□□□ 0.21
CACNB3-220ENST00000551716 L1RE1Q9UN81 338 aa16.36■□□□□ 0.21
CACNB3-220ENST00000551716 STARD13Q9Y3M8 1113 aa16.36■□□□□ 0.21
CACNB3-220ENST00000551716 TNRC6BQ9UPQ9 1833 aaKnown RBP16.35■□□□□ 0.21
CACNB3-220ENST00000551716 MYO16Q9Y6X6 1858 aa16.35■□□□□ 0.21
CACNB3-220ENST00000551716 ZNF840PA6NDX5 716 aa16.35■□□□□ 0.21
CACNB3-220ENST00000551716 TRABD2BA6NFA1 517 aa16.35■□□□□ 0.21
CACNB3-220ENST00000551716 K7ENM7 598 aa16.35■□□□□ 0.21
CACNB3-220ENST00000551716 TRAK2O60296 914 aa16.35■□□□□ 0.21
CACNB3-220ENST00000551716 ANXA13P27216 316 aa16.35■□□□□ 0.21
CACNB3-220ENST00000551716 KDSRQ06136 332 aa16.35■□□□□ 0.21
CACNB3-220ENST00000551716 MESP2Q0VG99 397 aa16.35■□□□□ 0.21
CACNB3-220ENST00000551716 GRIK2Q13002 908 aa16.35■□□□□ 0.21
CACNB3-220ENST00000551716 POSTNQ15063 836 aa16.35■□□□□ 0.21
CACNB3-220ENST00000551716 FAM171BQ6P995 826 aa16.35■□□□□ 0.21
CACNB3-220ENST00000551716 ZNF605Q86T29 641 aa16.35■□□□□ 0.21
CACNB3-220ENST00000551716 LRRC52Q8N7C0 313 aa16.35■□□□□ 0.21
CACNB3-220ENST00000551716 PDCD7Q8N8D1 485 aaKnown RBP16.35■□□□□ 0.21
CACNB3-220ENST00000551716 GDAP2Q9NXN4 497 aa16.35■□□□□ 0.21
CACNB3-220ENST00000551716 CFAP97Q9P2B7 532 aa16.35■□□□□ 0.21
CACNB3-220ENST00000551716 CYP8B1Q9UNU6 501 aa16.35■□□□□ 0.21
CACNB3-220ENST00000551716 CPQQ9Y646 472 aa16.35■□□□□ 0.21
CACNB3-220ENST00000551716 STYXL1Q9Y6J8 313 aa16.35■□□□□ 0.21
CACNB3-220ENST00000551716 PTPRDP23468 1912 aa16.35■□□□□ 0.21
CACNB3-220ENST00000551716 BPTFQ12830 3046 aa16.34■□□□□ 0.21
CACNB3-220ENST00000551716 A0A1B0GTW7 788 aa16.34■□□□□ 0.21
CACNB3-220ENST00000551716 E2F8A0AVK6 867 aa16.34■□□□□ 0.21
CACNB3-220ENST00000551716 CAPN8A6NHC0 703 aa16.34■□□□□ 0.21
CACNB3-220ENST00000551716 ATXN7O15265 892 aaPredicted RBP16.34■□□□□ 0.21
CACNB3-220ENST00000551716 FAM13AO94988 1023 aa16.34■□□□□ 0.21
CACNB3-220ENST00000551716 CER1O95813 267 aa16.34■□□□□ 0.21
CACNB3-220ENST00000551716 OLFM2O95897 454 aa16.34■□□□□ 0.21
CACNB3-220ENST00000551716 ACAT1P24752 427 aaKnown RBP16.34■□□□□ 0.21
CACNB3-220ENST00000551716 GRIK1P39086 918 aa16.34■□□□□ 0.21
CACNB3-220ENST00000551716 ABCG1P45844 678 aa16.34■□□□□ 0.21
CACNB3-220ENST00000551716 GTF2BQ00403 316 aa16.34■□□□□ 0.21
CACNB3-220ENST00000551716 SUZ12Q15022 739 aaKnown RBP16.34■□□□□ 0.21
CACNB3-220ENST00000551716 ARSHQ5FYA8 562 aa16.34■□□□□ 0.21
CACNB3-220ENST00000551716 SLC39A4Q6P5W5 647 aa16.34■□□□□ 0.21
CACNB3-220ENST00000551716 C12orf40Q86WS4 652 aa16.34■□□□□ 0.21
CACNB3-220ENST00000551716 PHTF2Q8N3S3 785 aa16.34■□□□□ 0.21
CACNB3-220ENST00000551716 TOP6BLQ8N6T0 577 aa16.34■□□□□ 0.21
CACNB3-220ENST00000551716 TTLL2Q9BWV7 592 aa16.34■□□□□ 0.21
CACNB3-220ENST00000551716 RNF38Q9H0F5 515 aa16.34■□□□□ 0.21
CACNB3-220ENST00000551716 ZDHHC4Q9NPG8 344 aa16.34■□□□□ 0.21
CACNB3-220ENST00000551716 AGAP1Q9UPQ3 857 aa16.34■□□□□ 0.21
CACNB3-220ENST00000551716 PCDHB6Q9Y5E3 794 aa16.34■□□□□ 0.21
CACNB3-220ENST00000551716 PCDHGB2Q9Y5G2 931 aa16.34■□□□□ 0.21
CACNB3-220ENST00000551716 PCDH15Q96QU1 1955 aa16.34■□□□□ 0.21
CACNB3-220ENST00000551716 PLXND1Q9Y4D7 1925 aa16.33■□□□□ 0.21
CACNB3-220ENST00000551716 NPHP3-ACAD11A0A0J9YXS1 232 aa16.33■□□□□ 0.2
CACNB3-220ENST00000551716 A0A1W2PQF6 199 aa16.33■□□□□ 0.2
CACNB3-220ENST00000551716 GABRDO14764 452 aa16.33■□□□□ 0.2
CACNB3-220ENST00000551716 SLC26A4O43511 780 aa16.33■□□□□ 0.2
CACNB3-220ENST00000551716 DKK1O94907 266 aa16.33■□□□□ 0.2
CACNB3-220ENST00000551716 ZNF131P52739 623 aa16.33■□□□□ 0.2
CACNB3-220ENST00000551716 IL17AQ16552 155 aa16.33■□□□□ 0.2
CACNB3-220ENST00000551716 LY6G5CQ5SRR4 150 aa16.33■□□□□ 0.2
CACNB3-220ENST00000551716 C10orf76Q5T2E6 689 aa16.33■□□□□ 0.2
CACNB3-220ENST00000551716 DPH6Q7L8W6 267 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms