RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 VCPP55072 806 aaKnown RBP5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 RHBDL3P58872 404 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 RNASE9P60153 205 aaKnown RBP5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 ATP6V0D1P61421 351 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 FOXO4P98177 505 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 DLG1Q12959 904 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 STK4Q13043 487 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 MED21Q13503 144 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 THOC5Q13769 683 aaKnown RBP5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 UBE3CQ15386 1083 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 SEC23AQ15436 765 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 OGFRL1Q5TC84 451 aaPredicted RBP5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 PCNX4Q63HM2 1172 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 TTC27Q6P3X3 843 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 FBXL19Q6PCT2 694 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 PTF1AQ7RTS3 328 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 OTOAQ7RTW8 1153 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 NOP9Q86U38 636 aaKnown RBP5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 TRABD2AQ86V40 505 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 C11orf74Q86VG3 221 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 LRRC6Q86X45 466 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 ZNF34Q8IZ26 560 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 SYCE1Q8N0S2 351 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 TMEM130Q8N3G9 435 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 GUF1Q8N442 669 aaKnown RBP5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 ESX1Q8N693 406 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 FAM133AQ8N9E0 248 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 PCYOX1LQ8NBM8 494 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 KIAA0895Q8NCT3 520 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 CXorf38Q8TB03 319 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 ADAMTS16Q8TE57 1224 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 GIMAP1Q8WWP7 306 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 ZNF75CPQ92670 426 aaPredicted RBP5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 ANKRD36BP1Q96IX9 119 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 TTC25Q96NG3 672 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 PANX3Q96QZ0 392 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 NACC1Q96RE7 527 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 SPZ1Q9BXG8 430 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 TRIM9Q9C026 710 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 PUS7LQ9H0K6 701 aaKnown RBP5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 MRPL18Q9H0U6 180 aaKnown RBP5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 CDC42EP4Q9H3Q1 356 aaKnown RBP5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 KCNK13Q9HB14 408 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 VTA1Q9NP79 307 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 FAM207AQ9NSI2 230 aaPredicted RBP5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 TMEM39AQ9NV64 488 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 NDE1Q9NXR1 346 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 IGSF9Q9P2J2 1179 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 MTRF1LQ9UGC7 380 aaKnown RBP5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 ARMCX3Q9UH62 379 aaPredicted RBP5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 KLHL3Q9UH77 587 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 RASAL2Q9UJF2 1139 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 ZFP69BQ9UJL9 534 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 GRID1Q9ULK0 1009 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 NAALADL1Q9UQQ1 740 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 ITM2BQ9Y287 266 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 FRMD4BQ9Y2L6 1034 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 TDRKHQ9Y2W6 561 aaKnown RBP5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 LMO7Q8WWI1 1683 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 NRXN3Q9Y4C0 1643 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 ZMYM2Q9UBW7 1377 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 MYH1P12882 1939 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 PXDNQ92626 1479 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 C15orf38-AP3S2A0A0A6YYH1 394 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 NPHP3-ACAD11A0A0J9YXS1 232 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 IQCA1LA6NCM1 817 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 TMEM114B3SHH9 223 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 ANKRD63C9JTQ0 380 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 GPAA1O43292 621 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 CNOT3O75175 753 aaKnown RBP5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 FBXO21O94952 628 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 FGFR1OPO95684 399 aaKnown RBP5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 DDX58O95786 925 aaKnown RBP5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 APBA3O96018 575 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 ATP5BP06576 529 aaKnown RBP5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 IFIT1P09914 478 aaKnown RBP5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 HSPA8P11142 646 aaKnown RBP5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 UBL4AP11441 157 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 ZNF23P17027 643 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 PON1P27169 355 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 GCAP28676 217 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 NOS3P29474 1203 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 ADD2P35612 726 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 ENTPD1P49961 510 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 HNRNPFP52597 415 aaKnown RBP5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 NR1H2P55055 460 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 CSE1LP55060 971 aaKnown RBP5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 NAA20P61599 178 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 AP2B1P63010 937 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 CDK16Q00536 496 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 MYBPC1Q00872 1141 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 HSPA14Q0VDF9 509 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 PPP2R5CQ13362 524 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 SPARCL1Q14515 664 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 STAT4Q14765 748 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 ARHGEF6Q15052 776 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 ZNF174Q15697 407 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 ZNF829Q3KNS6 432 aaPredicted RBP5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 HSF5Q4G112 596 aaPredicted RBP5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 TMEM67Q5HYA8 995 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms