RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 BPIFB1Q8TDL5 484 aa16.32■□□□□ 0.2
PRPF40B-211ENST00000551063 SHDQ96IW2 340 aa16.32■□□□□ 0.2
PRPF40B-211ENST00000551063 HEXIM2Q96MH2 286 aaKnown RBP16.32■□□□□ 0.2
PRPF40B-211ENST00000551063 TRPC7Q9HCX4 862 aa16.32■□□□□ 0.2
PRPF40B-211ENST00000551063 BEST1O76090 585 aa16.31■□□□□ 0.2
PRPF40B-211ENST00000551063 CKMP06732 381 aa16.31■□□□□ 0.2
PRPF40B-211ENST00000551063 USP17L7P0C7H9 530 aa16.31■□□□□ 0.2
PRPF40B-211ENST00000551063 ACO1P21399 889 aaKnown RBP16.31■□□□□ 0.2
PRPF40B-211ENST00000551063 STARD6P59095 220 aa16.31■□□□□ 0.2
PRPF40B-211ENST00000551063 PLCB2Q00722 1185 aa16.31■□□□□ 0.2
PRPF40B-211ENST00000551063 ARHGAP29Q52LW3 1261 aa16.31■□□□□ 0.2
PRPF40B-211ENST00000551063 SMYD5Q6GMV2 418 aa16.31■□□□□ 0.2
PRPF40B-211ENST00000551063 CREBRFQ8IUR6 639 aa16.31■□□□□ 0.2
PRPF40B-211ENST00000551063 TMEM105Q8N8V8 129 aa16.31■□□□□ 0.2
PRPF40B-211ENST00000551063 USP13Q92995 863 aaPredicted RBP16.31■□□□□ 0.2
PRPF40B-211ENST00000551063 FBXO32Q969P5 355 aa16.31■□□□□ 0.2
PRPF40B-211ENST00000551063 JAKMIP2Q96AA8 810 aa16.31■□□□□ 0.2
PRPF40B-211ENST00000551063 FAM81BQ96LP2 452 aa16.31■□□□□ 0.2
PRPF40B-211ENST00000551063 DUSP16Q9BY84 665 aa16.31■□□□□ 0.2
PRPF40B-211ENST00000551063 SMG9Q9H0W8 520 aaKnown RBP16.31■□□□□ 0.2
PRPF40B-211ENST00000551063 FBXO44Q9H4M3 255 aa16.31■□□□□ 0.2
PRPF40B-211ENST00000551063 TDP1Q9NUW8 608 aa16.31■□□□□ 0.2
PRPF40B-211ENST00000551063 HHLA1C9JL84 531 aa16.3■□□□□ 0.2
PRPF40B-211ENST00000551063 H0Y858 1186 aa16.3■□□□□ 0.2
PRPF40B-211ENST00000551063 ARNTLO00327 626 aa16.3■□□□□ 0.2
PRPF40B-211ENST00000551063 OLFM2O95897 454 aa16.3■□□□□ 0.2
PRPF40B-211ENST00000551063 PAEPP09466 180 aa16.3■□□□□ 0.2
PRPF40B-211ENST00000551063 TCF3P15923 654 aa16.3■□□□□ 0.2
PRPF40B-211ENST00000551063 AOC1P19801 751 aa16.3■□□□□ 0.2
PRPF40B-211ENST00000551063 RFX1P22670 979 aa16.3■□□□□ 0.2
PRPF40B-211ENST00000551063 EEF1GP26641 437 aaKnown RBP16.3■□□□□ 0.2
PRPF40B-211ENST00000551063 IFRD2Q12894 506 aaPredicted RBP16.3■□□□□ 0.2
PRPF40B-211ENST00000551063 USP4Q13107 963 aa16.3■□□□□ 0.2
PRPF40B-211ENST00000551063 SLC44A4Q53GD3 710 aa16.3■□□□□ 0.2
PRPF40B-211ENST00000551063 SGO2Q562F6 1265 aa16.3■□□□□ 0.2
PRPF40B-211ENST00000551063 TMEM270Q6UE05 265 aa16.3■□□□□ 0.2
PRPF40B-211ENST00000551063 GBP6Q6ZN66 633 aa16.3■□□□□ 0.2
PRPF40B-211ENST00000551063 ENOSF1Q7L5Y1 443 aa16.3■□□□□ 0.2
PRPF40B-211ENST00000551063 ARHGEF19Q8IW93 802 aa16.3■□□□□ 0.2
PRPF40B-211ENST00000551063 FLCNQ8NFG4 579 aa16.3■□□□□ 0.2
PRPF40B-211ENST00000551063 KAT5Q92993 513 aa16.3■□□□□ 0.2
PRPF40B-211ENST00000551063 LRRC3BQ96PB8 259 aa16.3■□□□□ 0.2
PRPF40B-211ENST00000551063 DDX23Q9BUQ8 820 aaKnown RBP16.3■□□□□ 0.2
PRPF40B-211ENST00000551063 TBC1D17Q9HA65 648 aa16.3■□□□□ 0.2
PRPF40B-211ENST00000551063 FAM86C1Q9NVL1 165 aa16.3■□□□□ 0.2
PRPF40B-211ENST00000551063 THG1LQ9NWX6 298 aaKnown RBP16.3■□□□□ 0.2
PRPF40B-211ENST00000551063 TMEM63CQ9P1W3 806 aa16.3■□□□□ 0.2
PRPF40B-211ENST00000551063 KIAA1257Q9ULG3 409 aa16.3■□□□□ 0.2
PRPF40B-211ENST00000551063 ARHGAP26Q9UNA1 814 aa16.3■□□□□ 0.2
PRPF40B-211ENST00000551063 NFE2L3Q9Y4A8 694 aa16.3■□□□□ 0.2
PRPF40B-211ENST00000551063 C2orf78A6NCI8 922 aa16.29■□□□□ 0.2
PRPF40B-211ENST00000551063 OAS1P00973 400 aaKnown RBP16.29■□□□□ 0.2
PRPF40B-211ENST00000551063 ZDHHC11BP0C7U3 371 aa16.29■□□□□ 0.2
PRPF40B-211ENST00000551063 VDRP11473 427 aa16.29■□□□□ 0.2
PRPF40B-211ENST00000551063 TUBP50607 506 aa16.29■□□□□ 0.2
PRPF40B-211ENST00000551063 ZNF132P52740 706 aa16.29■□□□□ 0.2
PRPF40B-211ENST00000551063 MLLT6P55198 1093 aaPredicted RBP16.29■□□□□ 0.2
PRPF40B-211ENST00000551063 SLC8A3P57103 927 aa16.29■□□□□ 0.2
PRPF40B-211ENST00000551063 EXOC3L4Q17RC7 722 aa16.29■□□□□ 0.2
PRPF40B-211ENST00000551063 SNX30Q5VWJ9 437 aa16.29■□□□□ 0.2
PRPF40B-211ENST00000551063 TRIM65Q6PJ69 517 aa16.29■□□□□ 0.2
PRPF40B-211ENST00000551063 RRAGAQ7L523 313 aa16.29■□□□□ 0.2
PRPF40B-211ENST00000551063 ANKRD52Q8NB46 1076 aa16.29■□□□□ 0.2
PRPF40B-211ENST00000551063 SCAMP5Q8TAC9 235 aa16.29■□□□□ 0.2
PRPF40B-211ENST00000551063 MSANTD3Q96H12 275 aa16.29■□□□□ 0.2
PRPF40B-211ENST00000551063 SLC22A12Q96S37 553 aa16.29■□□□□ 0.2
PRPF40B-211ENST00000551063 TUBGCP2Q9BSJ2 902 aa16.29■□□□□ 0.2
PRPF40B-211ENST00000551063 UBXN6Q9BZV1 441 aa16.29■□□□□ 0.2
PRPF40B-211ENST00000551063 TSPAN16Q9UKR8 245 aa16.29■□□□□ 0.2
PRPF40B-211ENST00000551063 CCL26Q9Y258 94 aa16.29■□□□□ 0.2
PRPF40B-211ENST00000551063 PCDHB4Q9Y5E5 795 aa16.29■□□□□ 0.2
PRPF40B-211ENST00000551063 WDFY4Q6ZS81 3184 aa16.29■□□□□ 0.2
PRPF40B-211ENST00000551063 KCNJ18B7U540 433 aa16.28■□□□□ 0.2
PRPF40B-211ENST00000551063 O00370 1275 aa16.28■□□□□ 0.2
PRPF40B-211ENST00000551063 CD19P15391 556 aa16.28■□□□□ 0.2
PRPF40B-211ENST00000551063 HDCP19113 662 aa16.28■□□□□ 0.2
PRPF40B-211ENST00000551063 PTMSP20962 102 aa16.28■□□□□ 0.2
PRPF40B-211ENST00000551063 KIF11P52732 1056 aa16.28■□□□□ 0.2
PRPF40B-211ENST00000551063 BCAT1P54687 386 aa16.28■□□□□ 0.2
PRPF40B-211ENST00000551063 SLC7A9P82251 487 aa16.28■□□□□ 0.2
PRPF40B-211ENST00000551063 KCNJ12Q14500 433 aa16.28■□□□□ 0.2
PRPF40B-211ENST00000551063 STILQ15468 1287 aa16.28■□□□□ 0.2
PRPF40B-211ENST00000551063 ZNF77Q15935 545 aa16.28■□□□□ 0.2
PRPF40B-211ENST00000551063 GOLGA7BQ2TAP0 167 aa16.28■□□□□ 0.2
PRPF40B-211ENST00000551063 VWA3BQ502W6 1294 aa16.28■□□□□ 0.2
PRPF40B-211ENST00000551063 C1orf228Q6PIY5 440 aa16.28■□□□□ 0.2
PRPF40B-211ENST00000551063 TPRG1Q6ZUI0 275 aa16.28■□□□□ 0.2
PRPF40B-211ENST00000551063 C11orf57Q6ZUT1 292 aaPredicted RBP16.28■□□□□ 0.2
PRPF40B-211ENST00000551063 GPRIN1Q7Z2K8 1008 aa16.28■□□□□ 0.2
PRPF40B-211ENST00000551063 GPIHBP1Q8IV16 184 aa16.28■□□□□ 0.2
PRPF40B-211ENST00000551063 KIAA1958Q8N8K9 716 aa16.28■□□□□ 0.2
PRPF40B-211ENST00000551063 ARL14EPQ8N8R7 260 aaPredicted RBP16.28■□□□□ 0.2
PRPF40B-211ENST00000551063 RBBP8NLQ8NC74 664 aaPredicted RBP16.28■□□□□ 0.2
PRPF40B-211ENST00000551063 KREMEN1Q96MU8 473 aa16.28■□□□□ 0.2
PRPF40B-211ENST00000551063 NDST4Q9H3R1 872 aa16.28■□□□□ 0.2
PRPF40B-211ENST00000551063 HEBP1Q9NRV9 189 aa16.28■□□□□ 0.2
PRPF40B-211ENST00000551063 SAMSN1Q9NSI8 373 aaKnown RBP16.28■□□□□ 0.2
PRPF40B-211ENST00000551063 GMIPQ9P107 970 aa16.28■□□□□ 0.2
PRPF40B-211ENST00000551063 HESX1Q9UBX0 185 aa16.28■□□□□ 0.2
PRPF40B-211ENST00000551063 APEX2Q9UBZ4 518 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms