RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 USP15Q9Y4E8 981 aaPredicted RBP13.78□□□□□ -0.2
RAB5C-206ENST00000550406 FAM92AA1XBS5 289 aa13.77□□□□□ -0.21
RAB5C-206ENST00000550406 MFAP3LO75121 409 aa13.77□□□□□ -0.21
RAB5C-206ENST00000550406 XYLBO75191 536 aa13.77□□□□□ -0.21
RAB5C-206ENST00000550406 TADA3O75528 432 aa13.77□□□□□ -0.21
RAB5C-206ENST00000550406 F11P03951 625 aa13.77□□□□□ -0.21
RAB5C-206ENST00000550406 PLEKP08567 350 aaPredicted RBP13.77□□□□□ -0.21
RAB5C-206ENST00000550406 SETSIPP0DME0 302 aa13.77□□□□□ -0.21
RAB5C-206ENST00000550406 CSH1P0DML2 217 aa13.77□□□□□ -0.21
RAB5C-206ENST00000550406 CSH2P0DML3 217 aa13.77□□□□□ -0.21
RAB5C-206ENST00000550406 CDC25BP30305 580 aa13.77□□□□□ -0.21
RAB5C-206ENST00000550406 HNRNPH3P31942 346 aaKnown RBP13.77□□□□□ -0.21
RAB5C-206ENST00000550406 CDH5P33151 784 aaPredicted RBP13.77□□□□□ -0.21
RAB5C-206ENST00000550406 PLA2G4AP47712 749 aa13.77□□□□□ -0.21
RAB5C-206ENST00000550406 RGS7P49802 495 aa13.77□□□□□ -0.21
RAB5C-206ENST00000550406 PDE6CP51160 858 aa13.77□□□□□ -0.21
RAB5C-206ENST00000550406 KIF11P52732 1056 aa13.77□□□□□ -0.21
RAB5C-206ENST00000550406 SLC5A3P53794 718 aa13.77□□□□□ -0.21
RAB5C-206ENST00000550406 SMAD4Q13485 552 aaKnown RBP13.77□□□□□ -0.21
RAB5C-206ENST00000550406 TRIM14Q14142 442 aa13.77□□□□□ -0.21
RAB5C-206ENST00000550406 ATAT1Q5SQI0 421 aa13.77□□□□□ -0.21
RAB5C-206ENST00000550406 GAREM2Q75VX8 874 aa13.77□□□□□ -0.21
RAB5C-206ENST00000550406 ZNF571Q7Z3V5 609 aaPredicted RBP13.77□□□□□ -0.21
RAB5C-206ENST00000550406 ITIH5Q86UX2 942 aa13.77□□□□□ -0.21
RAB5C-206ENST00000550406 TC2NQ8N9U0 490 aa13.77□□□□□ -0.21
RAB5C-206ENST00000550406 KCTD13Q8WZ19 329 aa13.77□□□□□ -0.21
RAB5C-206ENST00000550406 TRMT2BQ96GJ1 504 aaKnown RBP13.77□□□□□ -0.21
RAB5C-206ENST00000550406 DNAJC7Q99615 494 aa13.77□□□□□ -0.21
RAB5C-206ENST00000550406 AGPAT1Q99943 283 aa13.77□□□□□ -0.21
RAB5C-206ENST00000550406 SLC4A5Q9BY07 1137 aa13.77□□□□□ -0.21
RAB5C-206ENST00000550406 POMKQ9H5K3 350 aa13.77□□□□□ -0.21
RAB5C-206ENST00000550406 HAUS4Q9H6D7 363 aa13.77□□□□□ -0.21
RAB5C-206ENST00000550406 PIDD1Q9HB75 910 aa13.77□□□□□ -0.21
RAB5C-206ENST00000550406 WDR6Q9NNW5 1121 aaKnown RBP13.77□□□□□ -0.21
RAB5C-206ENST00000550406 PNPLA8Q9NP80 782 aa13.77□□□□□ -0.21
RAB5C-206ENST00000550406 AVENQ9NQS1 362 aaPredicted RBP13.77□□□□□ -0.21
RAB5C-206ENST00000550406 TJP2Q9UDY2 1190 aa13.77□□□□□ -0.21
RAB5C-206ENST00000550406 MAGED2Q9UNF1 606 aaPredicted RBP13.77□□□□□ -0.21
RAB5C-206ENST00000550406 USP3Q9Y6I4 520 aa13.77□□□□□ -0.21
RAB5C-206ENST00000550406 PRUNE2Q8WUY3 3088 aa13.77□□□□□ -0.21
RAB5C-206ENST00000550406 FAM170AA1A519 330 aa13.76□□□□□ -0.21
RAB5C-206ENST00000550406 PIK3R2O00459 728 aa13.76□□□□□ -0.21
RAB5C-206ENST00000550406 CYP1A1P04798 512 aaPredicted RBP13.76□□□□□ -0.21
RAB5C-206ENST00000550406 GJA1P17302 382 aa13.76□□□□□ -0.21
RAB5C-206ENST00000550406 MTHFRP42898 656 aa13.76□□□□□ -0.21
RAB5C-206ENST00000550406 VEPH1Q14D04 833 aa13.76□□□□□ -0.21
RAB5C-206ENST00000550406 PABPC1LQ4VXU2 614 aaKnown RBP13.76□□□□□ -0.21
RAB5C-206ENST00000550406 CES5AQ6NT32 575 aa13.76□□□□□ -0.21
RAB5C-206ENST00000550406 BHLHA9Q7RTU4 235 aa13.76□□□□□ -0.21
RAB5C-206ENST00000550406 ZNF677Q86XU0 584 aa13.76□□□□□ -0.21
RAB5C-206ENST00000550406 ELMOD1Q8N336 334 aa13.76□□□□□ -0.21
RAB5C-206ENST00000550406 C1orf131Q8NDD1 294 aaKnown RBP13.76□□□□□ -0.21
RAB5C-206ENST00000550406 ZNF397Q8NF99 534 aaPredicted RBP13.76□□□□□ -0.21
RAB5C-206ENST00000550406 OR8K1Q8NGG5 319 aa13.76□□□□□ -0.21
RAB5C-206ENST00000550406 ITFG1Q8TB96 612 aa13.76□□□□□ -0.21
RAB5C-206ENST00000550406 SHKBP1Q8TBC3 707 aa13.76□□□□□ -0.21
RAB5C-206ENST00000550406 STK32AQ8WU08 396 aa13.76□□□□□ -0.21
RAB5C-206ENST00000550406 NDRG1Q92597 394 aaKnown RBP13.76□□□□□ -0.21
RAB5C-206ENST00000550406 NUCKS1Q9H1E3 243 aaKnown RBP13.76□□□□□ -0.21
RAB5C-206ENST00000550406 COMMD8Q9NX08 183 aa13.76□□□□□ -0.21
RAB5C-206ENST00000550406 ARHGAP20Q9P2F6 1191 aa13.76□□□□□ -0.21
RAB5C-206ENST00000550406 COL6A3P12111 3177 aa13.75□□□□□ -0.21
RAB5C-206ENST00000550406 CLUHO75153 1309 aa13.75□□□□□ -0.21
RAB5C-206ENST00000550406 HELZP42694 1942 aaKnown RBP13.75□□□□□ -0.21
RAB5C-206ENST00000550406 RTN3O95197 1032 aaPredicted RBP13.75□□□□□ -0.21
RAB5C-206ENST00000550406 MYL4P12829 197 aa13.75□□□□□ -0.21
RAB5C-206ENST00000550406 UNGP13051 313 aaPredicted RBP13.75□□□□□ -0.21
RAB5C-206ENST00000550406 YWHAQP27348 245 aa13.75□□□□□ -0.21
RAB5C-206ENST00000550406 GABRR2P28476 465 aa13.75□□□□□ -0.21
RAB5C-206ENST00000550406 KCNQ1P51787 676 aa13.75□□□□□ -0.21
RAB5C-206ENST00000550406 NOMO3P69849 1222 aa13.75□□□□□ -0.21
RAB5C-206ENST00000550406 IFRD2Q12894 506 aaPredicted RBP13.75□□□□□ -0.21
RAB5C-206ENST00000550406 TAF10Q12962 218 aa13.75□□□□□ -0.21
RAB5C-206ENST00000550406 CBX2Q14781 532 aaPredicted RBP13.75□□□□□ -0.21
RAB5C-206ENST00000550406 SMAD2Q15796 467 aaKnown RBP13.75□□□□□ -0.21
RAB5C-206ENST00000550406 SLC30A5Q8TAD4 765 aa13.75□□□□□ -0.21
RAB5C-206ENST00000550406 CLEC4CQ8WTT0 213 aa13.75□□□□□ -0.21
RAB5C-206ENST00000550406 HSFY1Q96LI6 401 aa13.75□□□□□ -0.21
RAB5C-206ENST00000550406 RIPOR3Q96MK2 946 aa13.75□□□□□ -0.21
RAB5C-206ENST00000550406 CPXM1Q96SM3 734 aa13.75□□□□□ -0.21
RAB5C-206ENST00000550406 ULBP1Q9BZM6 244 aa13.75□□□□□ -0.21
RAB5C-206ENST00000550406 ASAH2Q9NR71 780 aa13.75□□□□□ -0.21
RAB5C-206ENST00000550406 ABHD10Q9NUJ1 306 aa13.75□□□□□ -0.21
RAB5C-206ENST00000550406 CHORDC1Q9UHD1 332 aaPredicted RBP13.75□□□□□ -0.21
RAB5C-206ENST00000550406 NUP210Q8TEM1 1887 aaPredicted RBP13.75□□□□□ -0.21
RAB5C-206ENST00000550406 A0A1W2PRU2 124 aa13.74□□□□□ -0.21
RAB5C-206ENST00000550406 AKR1B15C9JRZ8 316 aaPredicted RBP13.74□□□□□ -0.21
RAB5C-206ENST00000550406 DDX3XO00571 662 aaKnown RBP eCLIP13.74□□□□□ -0.217e-9■■■□□ 17.5
RAB5C-206ENST00000550406 SERPING1P05155 500 aa13.74□□□□□ -0.21
RAB5C-206ENST00000550406 USP17L7P0C7H9 530 aa13.74□□□□□ -0.21
RAB5C-206ENST00000550406 ZDHHC11BP0C7U3 371 aa13.74□□□□□ -0.21
RAB5C-206ENST00000550406 CCDC172P0C7W6 258 aa13.74□□□□□ -0.21
RAB5C-206ENST00000550406 LCP1P13796 627 aa13.74□□□□□ -0.21
RAB5C-206ENST00000550406 IL9P15248 144 aa13.74□□□□□ -0.21
RAB5C-206ENST00000550406 CEBPBP17676 345 aa13.74□□□□□ -0.21
RAB5C-206ENST00000550406 FSHRP23945 695 aa13.74□□□□□ -0.21
RAB5C-206ENST00000550406 TKTL1P51854 596 aa13.74□□□□□ -0.21
RAB5C-206ENST00000550406 KLHL30Q0D2K2 578 aa13.74□□□□□ -0.21
RAB5C-206ENST00000550406 ADIGQ0VDE8 80 aa13.74□□□□□ -0.21
RAB5C-206ENST00000550406 PDCLQ13371 301 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms