RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 ASS1P00966 412 aaKnown RBP17.35■□□□□ 0.37
VPS29-207ENST00000549970 KRT13P13646 458 aa17.35■□□□□ 0.37
VPS29-207ENST00000549970 PFKLP17858 780 aa17.35■□□□□ 0.37
VPS29-207ENST00000549970 RPL13P26373 211 aaKnown RBP17.35■□□□□ 0.37
VPS29-207ENST00000549970 GJA4P35212 333 aa17.35■□□□□ 0.37
VPS29-207ENST00000549970 PPP3CCP48454 512 aa17.35■□□□□ 0.37
VPS29-207ENST00000549970 GCLMP48507 274 aa17.35■□□□□ 0.37
VPS29-207ENST00000549970 FNTBP49356 437 aa17.35■□□□□ 0.37
VPS29-207ENST00000549970 ZXDBP98169 803 aa17.35■□□□□ 0.37
VPS29-207ENST00000549970 NFIL3Q16649 462 aa17.35■□□□□ 0.37
VPS29-207ENST00000549970 EML3Q32P44 896 aa17.35■□□□□ 0.37
VPS29-207ENST00000549970 NAIF1Q69YI7 327 aaPredicted RBP17.35■□□□□ 0.37
VPS29-207ENST00000549970 HEATR6Q6AI08 1181 aaKnown RBP17.35■□□□□ 0.37
VPS29-207ENST00000549970 PKN3Q6P5Z2 889 aa17.35■□□□□ 0.37
VPS29-207ENST00000549970 INTS8Q75QN2 995 aaKnown RBP17.35■□□□□ 0.37
VPS29-207ENST00000549970 FAM186BQ8IYM0 893 aa17.35■□□□□ 0.37
VPS29-207ENST00000549970 TAF4BQ92750 862 aa17.35■□□□□ 0.37
VPS29-207ENST00000549970 ATP2A3Q93084 1043 aa17.35■□□□□ 0.37
VPS29-207ENST00000549970 FBXO32Q969P5 355 aa17.35■□□□□ 0.37
VPS29-207ENST00000549970 SMARCD1Q96GM5 515 aa17.35■□□□□ 0.37
VPS29-207ENST00000549970 KRT82Q9NSB4 513 aa17.35■□□□□ 0.37
VPS29-207ENST00000549970 K7ESF4 209 aa17.34■□□□□ 0.37
VPS29-207ENST00000549970 LEFTY2O00292 366 aa17.34■□□□□ 0.37
VPS29-207ENST00000549970 AP1G2O75843 785 aa17.34■□□□□ 0.37
VPS29-207ENST00000549970 RTN3O95197 1032 aaPredicted RBP17.34■□□□□ 0.37
VPS29-207ENST00000549970 PAPSS2O95340 614 aaPredicted RBP17.34■□□□□ 0.37
VPS29-207ENST00000549970 EGFP01133 1207 aa17.34■□□□□ 0.37
VPS29-207ENST00000549970 CCDC130P13994 396 aa17.34■□□□□ 0.37
VPS29-207ENST00000549970 TCF3P15923 654 aa17.34■□□□□ 0.37
VPS29-207ENST00000549970 YWHAQP27348 245 aa17.34■□□□□ 0.37
VPS29-207ENST00000549970 HOXC13P31276 330 aa17.34■□□□□ 0.37
VPS29-207ENST00000549970 MYH10P35580 1976 aa17.34■□□□□ 0.37
VPS29-207ENST00000549970 PSMC2P35998 433 aaKnown RBP17.34■□□□□ 0.37
VPS29-207ENST00000549970 ASPAP45381 313 aa17.34■□□□□ 0.37
VPS29-207ENST00000549970 GALK1P51570 392 aa17.34■□□□□ 0.37
VPS29-207ENST00000549970 NDST1P52848 882 aa17.34■□□□□ 0.37
VPS29-207ENST00000549970 PPP3CAQ08209 521 aa17.34■□□□□ 0.37
VPS29-207ENST00000549970 ADAM9Q13443 819 aa17.34■□□□□ 0.37
VPS29-207ENST00000549970 PNOCQ13519 176 aa17.34■□□□□ 0.37
VPS29-207ENST00000549970 LPAL2Q16609 132 aa17.34■□□□□ 0.37
VPS29-207ENST00000549970 PAQR9Q6ZVX9 377 aa17.34■□□□□ 0.37
VPS29-207ENST00000549970 FUKQ8N0W3 1084 aa17.34■□□□□ 0.37
VPS29-207ENST00000549970 P2RY13Q9BPV8 354 aa17.34■□□□□ 0.37
VPS29-207ENST00000549970 IMPG2Q9BZV3 1241 aa17.34■□□□□ 0.37
VPS29-207ENST00000549970 RNF38Q9H0F5 515 aa17.34■□□□□ 0.37
VPS29-207ENST00000549970 LINC00597Q9H2U6 94 aa17.34■□□□□ 0.37
VPS29-207ENST00000549970 FBRSL1Q9HCM7 1045 aaKnown RBP17.34■□□□□ 0.37
VPS29-207ENST00000549970 DMAP1Q9NPF5 467 aaPredicted RBP17.34■□□□□ 0.37
VPS29-207ENST00000549970 SMPD4Q9NXE4 827 aa17.34■□□□□ 0.37
VPS29-207ENST00000549970 CPQQ9Y646 472 aa17.34■□□□□ 0.37
VPS29-207ENST00000549970 GOLGA6L4A6NEF3 574 aa17.33■□□□□ 0.36
VPS29-207ENST00000549970 RNF40O75150 1001 aa17.33■□□□□ 0.36
VPS29-207ENST00000549970 OLFM2O95897 454 aa17.33■□□□□ 0.36
VPS29-207ENST00000549970 OAS1P00973 400 aaKnown RBP17.33■□□□□ 0.36
VPS29-207ENST00000549970 ID4P47928 161 aa17.33■□□□□ 0.36
VPS29-207ENST00000549970 SLC5A3P53794 718 aa17.33■□□□□ 0.36
VPS29-207ENST00000549970 SLC7A9P82251 487 aa17.33■□□□□ 0.36
VPS29-207ENST00000549970 ZCWPW2Q504Y3 356 aa17.33■□□□□ 0.36
VPS29-207ENST00000549970 PRR23BQ6ZRT6 265 aa17.33■□□□□ 0.36
VPS29-207ENST00000549970 FMR1NBQ8N0W7 255 aaPredicted RBP17.33■□□□□ 0.36
VPS29-207ENST00000549970 SCAMP5Q8TAC9 235 aa17.33■□□□□ 0.36
VPS29-207ENST00000549970 SLC2A14Q8TDB8 520 aa17.33■□□□□ 0.36
VPS29-207ENST00000549970 TAS1R2Q8TE23 839 aa17.33■□□□□ 0.36
VPS29-207ENST00000549970 SECISBP2LQ93073 1101 aaKnown RBP17.33■□□□□ 0.36
VPS29-207ENST00000549970 EEF2KMTQ96G04 330 aa17.33■□□□□ 0.36
VPS29-207ENST00000549970 FAM49BQ9NUQ9 324 aa17.33■□□□□ 0.36
VPS29-207ENST00000549970 RAB23Q9ULC3 237 aa17.33■□□□□ 0.36
VPS29-207ENST00000549970 SCAMP3O14828 347 aaKnown RBP17.32■□□□□ 0.36
VPS29-207ENST00000549970 NFATC1O95644 943 aa17.32■□□□□ 0.36
VPS29-207ENST00000549970 MBL2P11226 248 aaPredicted RBP17.32■□□□□ 0.36
VPS29-207ENST00000549970 DRD1P21728 446 aa17.32■□□□□ 0.36
VPS29-207ENST00000549970 NUCB2P80303 420 aa17.32■□□□□ 0.36
VPS29-207ENST00000549970 NR1H3Q13133 447 aa17.32■□□□□ 0.36
VPS29-207ENST00000549970 SRSF5Q13243 272 aaKnown RBP17.32■□□□□ 0.36
VPS29-207ENST00000549970 LONP2Q86WA8 852 aa17.32■□□□□ 0.36
VPS29-207ENST00000549970 UNC93AQ86WB7 457 aa17.32■□□□□ 0.36
VPS29-207ENST00000549970 C12orf29Q8N999 325 aa17.32■□□□□ 0.36
VPS29-207ENST00000549970 PDZD8Q8NEN9 1154 aa17.32■□□□□ 0.36
VPS29-207ENST00000549970 CD101Q93033 1021 aa17.32■□□□□ 0.36
VPS29-207ENST00000549970 EXOC4Q96A65 974 aa17.32■□□□□ 0.36
VPS29-207ENST00000549970 SMOQ99835 787 aa17.32■□□□□ 0.36
VPS29-207ENST00000549970 APOBEC3GQ9HC16 384 aaKnown RBP17.32■□□□□ 0.36
VPS29-207ENST00000549970 CHORDC1Q9UHD1 332 aaPredicted RBP17.32■□□□□ 0.36
VPS29-207ENST00000549970 GMEB2Q9UKD1 530 aa17.32■□□□□ 0.36
VPS29-207ENST00000549970 DNAH14Q0VDD8 3507 aa17.31■□□□□ 0.36
VPS29-207ENST00000549970 TNFRSF10BO14763 440 aa17.31■□□□□ 0.36
VPS29-207ENST00000549970 BEST1O76090 585 aa17.31■□□□□ 0.36
VPS29-207ENST00000549970 ADORA2BP29275 332 aa17.31■□□□□ 0.36
VPS29-207ENST00000549970 MAP3K7CLP57077 242 aa17.31■□□□□ 0.36
VPS29-207ENST00000549970 SIM2Q14190 667 aaPredicted RBP17.31■□□□□ 0.36
VPS29-207ENST00000549970 EDRF1Q3B7T1 1238 aa17.31■□□□□ 0.36
VPS29-207ENST00000549970 FILIP1Q7Z7B0 1213 aa17.31■□□□□ 0.36
VPS29-207ENST00000549970 CRYBG2Q8N1P7 616 aa17.31■□□□□ 0.36
VPS29-207ENST00000549970 CCDC150Q8NCX0 1101 aa17.31■□□□□ 0.36
VPS29-207ENST00000549970 ZMIZ2Q8NF64 920 aa17.31■□□□□ 0.36
VPS29-207ENST00000549970 OVCA2Q8WZ82 227 aa17.31■□□□□ 0.36
VPS29-207ENST00000549970 ERCC4Q92889 916 aaPredicted RBP17.31■□□□□ 0.36
VPS29-207ENST00000549970 TWNKQ96RR1 684 aa17.31■□□□□ 0.36
VPS29-207ENST00000549970 TMEM8AQ9HCN3 771 aa17.31■□□□□ 0.36
VPS29-207ENST00000549970 RMND1Q9NWS8 449 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms