RNA–Protein interactions for RNA: ENST00000549870.5

TUBA1B-205, Transcript of tubulin alpha 1b, humanhuman

TSL 4

Gene TUBA1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-205ENST00000549870 CLIC4Q9Y696 253 aa12.91□□□□□ -0.34
TUBA1B-205ENST00000549870 MYMKA6NI61 221 aa12.9□□□□□ -0.34
TUBA1B-205ENST00000549870 FIGNL2A6NMB9 653 aa12.9□□□□□ -0.34
TUBA1B-205ENST00000549870 HMGA1P17096 107 aaKnown RBP12.9□□□□□ -0.34
TUBA1B-205ENST00000549870 AVPR1AP37288 418 aa12.9□□□□□ -0.34
TUBA1B-205ENST00000549870 PNPLA4P41247 253 aa12.9□□□□□ -0.34
TUBA1B-205ENST00000549870 NLRP12P59046 1061 aa12.9□□□□□ -0.34
TUBA1B-205ENST00000549870 EHHADHQ08426 723 aa12.9□□□□□ -0.34
TUBA1B-205ENST00000549870 RUNX3Q13761 415 aa12.9□□□□□ -0.34
TUBA1B-205ENST00000549870 CSRP2Q16527 193 aa12.9□□□□□ -0.34
TUBA1B-205ENST00000549870 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.9□□□□□ -0.34
TUBA1B-205ENST00000549870 WDR5BQ86VZ2 330 aa12.9□□□□□ -0.34
TUBA1B-205ENST00000549870 USP13Q92995 863 aaPredicted RBP12.9□□□□□ -0.34
TUBA1B-205ENST00000549870 HSH2DQ96JZ2 352 aa12.9□□□□□ -0.34
TUBA1B-205ENST00000549870 ZNF560Q96MR9 790 aa12.9□□□□□ -0.34
TUBA1B-205ENST00000549870 FAM213AQ9BRX8 229 aa12.9□□□□□ -0.34
TUBA1B-205ENST00000549870 PI4K2AQ9BTU6 479 aa12.9□□□□□ -0.34
TUBA1B-205ENST00000549870 MRPL44Q9H9J2 332 aaKnown RBP12.9□□□□□ -0.34
TUBA1B-205ENST00000549870 TBC1D7Q9P0N9 293 aa12.9□□□□□ -0.34
TUBA1B-205ENST00000549870 SEL1LQ9UBV2 794 aa12.9□□□□□ -0.34
TUBA1B-205ENST00000549870 STK17AQ9UEE5 414 aa12.9□□□□□ -0.34
TUBA1B-205ENST00000549870 CCDC39Q9UFE4 941 aa12.9□□□□□ -0.34
TUBA1B-205ENST00000549870 EXOC7Q9UPT5 735 aa12.9□□□□□ -0.34
TUBA1B-205ENST00000549870 CCL26Q9Y258 94 aa12.9□□□□□ -0.34
TUBA1B-205ENST00000549870 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 OTOL1A6NHN0 477 aaPredicted RBP12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 SOBPA7XYQ1 873 aa12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 EXTL3O43909 919 aa12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 PRPF40AO75400 957 aaKnown RBP12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 CSH1P0DML2 217 aa12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 CSH2P0DML3 217 aa12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 DDX6P26196 483 aaKnown RBP eCLIP12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 POLR2BP30876 1174 aaKnown RBP12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 GPR15P49685 360 aa12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 TFAMQ00059 246 aaKnown RBP12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 TSPY1Q01534 308 aa12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 NFE2Q16621 373 aaPredicted RBP12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 PKDCCQ504Y2 493 aa12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 L1TD1Q5T7N2 865 aaKnown RBP12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 RRAGBQ5VZM2 374 aa12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 TXNDC8Q6A555 127 aa12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 SCARA3Q6AZY7 606 aa12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 PRR23CQ6ZRP0 262 aa12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 CEP68Q76N32 757 aa12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 SV2BQ7L1I2 683 aa12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 PDCL2Q8N4E4 241 aa12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 ZSWIM2Q8NEG5 633 aa12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 NETO1Q8TDF5 533 aa12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 CACTINQ8WUQ7 758 aaKnown RBP12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 DNAJC19Q96DA6 116 aa12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 CNTNAP3BQ96NU0 1288 aa12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 ACCSQ96QU6 501 aa12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 ACBD6Q9BR61 282 aa12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 CNTNAP3Q9BZ76 1288 aa12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 EBF3Q9H4W6 596 aa12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 UPF2Q9HAU5 1272 aaKnown RBP12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 HPS4Q9NQG7 708 aa12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 TDP1Q9NUW8 608 aa12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 FBXO2Q9UK22 296 aaPredicted RBP12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 MAGED2Q9UNF1 606 aaPredicted RBP12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 AGAP1Q9UPQ3 857 aa12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 SRPRBQ9Y5M8 271 aaKnown RBP12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 CEP250Q9BV73 2442 aa12.89□□□□□ -0.35
TUBA1B-205ENST00000549870 SCN1AP35498 2009 aa12.88□□□□□ -0.35
TUBA1B-205ENST00000549870 VPS37CA5D8V6 355 aaPredicted RBP12.88□□□□□ -0.35
TUBA1B-205ENST00000549870 TRDMT1O14717 391 aaKnown RBP12.88□□□□□ -0.35
TUBA1B-205ENST00000549870 SLC30A4O14863 429 aa12.88□□□□□ -0.35
TUBA1B-205ENST00000549870 AXIN1O15169 862 aa12.88□□□□□ -0.35
TUBA1B-205ENST00000549870 LDHAP00338 332 aaKnown RBP12.88□□□□□ -0.35
TUBA1B-205ENST00000549870 ITGB3P05106 788 aa12.88□□□□□ -0.35
TUBA1B-205ENST00000549870 GAP43P17677 238 aa12.88□□□□□ -0.35
TUBA1B-205ENST00000549870 CYP2F1P24903 491 aa12.88□□□□□ -0.35
TUBA1B-205ENST00000549870 GRSF1Q12849 480 aaKnown RBP eCLIP12.88□□□□□ -0.35
TUBA1B-205ENST00000549870 BFSP1Q12934 665 aa12.88□□□□□ -0.35
TUBA1B-205ENST00000549870 DDR2Q16832 855 aa12.88□□□□□ -0.35
TUBA1B-205ENST00000549870 TMEM196Q5HYL7 178 aa12.88□□□□□ -0.35
TUBA1B-205ENST00000549870 SDHAF4Q5VUM1 108 aa12.88□□□□□ -0.35
TUBA1B-205ENST00000549870 TRIM68Q6AZZ1 485 aa12.88□□□□□ -0.35
TUBA1B-205ENST00000549870 FSTL4Q6MZW2 842 aa12.88□□□□□ -0.35
TUBA1B-205ENST00000549870 PKN3Q6P5Z2 889 aa12.88□□□□□ -0.35
TUBA1B-205ENST00000549870 MON1AQ86VX9 555 aa12.88□□□□□ -0.35
TUBA1B-205ENST00000549870 BRSK2Q8IWQ3 736 aa12.88□□□□□ -0.35
TUBA1B-205ENST00000549870 CSGALNACT2Q8N6G5 542 aa12.88□□□□□ -0.35
TUBA1B-205ENST00000549870 C1orf127Q8N9H9 656 aa12.88□□□□□ -0.35
TUBA1B-205ENST00000549870 STKLD1Q8NE28 680 aa12.88□□□□□ -0.35
TUBA1B-205ENST00000549870 LEO1Q8WVC0 666 aaPredicted RBP12.88□□□□□ -0.35
TUBA1B-205ENST00000549870 MRPS31Q92665 395 aaKnown RBP12.88□□□□□ -0.35
TUBA1B-205ENST00000549870 CHFRQ96EP1 664 aa12.88□□□□□ -0.35
TUBA1B-205ENST00000549870 SAAL1Q96ER3 474 aa12.88□□□□□ -0.35
TUBA1B-205ENST00000549870 CLIC6Q96NY7 704 aa12.88□□□□□ -0.35
TUBA1B-205ENST00000549870 IGSF5Q9NSI5 407 aa12.88□□□□□ -0.35
TUBA1B-205ENST00000549870 DDX43Q9NXZ2 648 aaKnown RBP12.88□□□□□ -0.35
TUBA1B-205ENST00000549870 FAM13BQ9NYF5 915 aa12.88□□□□□ -0.35
TUBA1B-205ENST00000549870 DNMT3LQ9UJW3 386 aa12.88□□□□□ -0.35
TUBA1B-205ENST00000549870 L1RE1Q9UN81 338 aa12.88□□□□□ -0.35
TUBA1B-205ENST00000549870 HUS1O60921 280 aa12.87□□□□□ -0.35
TUBA1B-205ENST00000549870 ATG13O75143 517 aa12.87□□□□□ -0.35
TUBA1B-205ENST00000549870 GCNT3O95395 438 aa12.87□□□□□ -0.35
TUBA1B-205ENST00000549870 IDEP14735 1019 aa12.87□□□□□ -0.35
TUBA1B-205ENST00000549870 ARSAP15289 507 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms