RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 GAB3Q8WWW8 586 aa16.76■□□□□ 0.27
CHMP1A-206ENST00000549139 PKMYT1Q99640 499 aa16.76■□□□□ 0.27
CHMP1A-206ENST00000549139 LSM14BQ9BX40 385 aaKnown RBP16.76■□□□□ 0.27
CHMP1A-206ENST00000549139 CRISPLD1Q9H336 500 aa16.76■□□□□ 0.27
CHMP1A-206ENST00000549139 GTSE1Q9NYZ3 720 aa16.76■□□□□ 0.27
CHMP1A-206ENST00000549139 CDH9Q9ULB4 789 aa16.76■□□□□ 0.27
CHMP1A-206ENST00000549139 MYH10P35580 1976 aa16.76■□□□□ 0.27
CHMP1A-206ENST00000549139 WDFY3Q8IZQ1 3526 aa16.76■□□□□ 0.27
CHMP1A-206ENST00000549139 NUP210Q8TEM1 1887 aaPredicted RBP16.76■□□□□ 0.27
CHMP1A-206ENST00000549139 DSPP15924 2871 aaKnown RBP16.75■□□□□ 0.27
CHMP1A-206ENST00000549139 CCDC163A0A0D9SF12 145 aa16.75■□□□□ 0.27
CHMP1A-206ENST00000549139 A0A1W2PRU2 124 aa16.75■□□□□ 0.27
CHMP1A-206ENST00000549139 FGFR1OPO95684 399 aaKnown RBP16.75■□□□□ 0.27
CHMP1A-206ENST00000549139 GNA14O95837 355 aa16.75■□□□□ 0.27
CHMP1A-206ENST00000549139 P4HA1P13674 534 aa16.75■□□□□ 0.27
CHMP1A-206ENST00000549139 ACAT1P24752 427 aaKnown RBP16.75■□□□□ 0.27
CHMP1A-206ENST00000549139 LMO2P25791 158 aa16.75■□□□□ 0.27
CHMP1A-206ENST00000549139 PIK3CAP42336 1068 aa16.75■□□□□ 0.27
CHMP1A-206ENST00000549139 PLD1Q13393 1074 aa16.75■□□□□ 0.27
CHMP1A-206ENST00000549139 PON2Q15165 354 aa16.75■□□□□ 0.27
CHMP1A-206ENST00000549139 TCERG1LQ5VWI1 586 aa16.75■□□□□ 0.27
CHMP1A-206ENST00000549139 PKN3Q6P5Z2 889 aa16.75■□□□□ 0.27
CHMP1A-206ENST00000549139 FAM171BQ6P995 826 aa16.75■□□□□ 0.27
CHMP1A-206ENST00000549139 RBM43Q6ZSC3 357 aaKnown RBP16.75■□□□□ 0.27
CHMP1A-206ENST00000549139 CACNA2D4Q7Z3S7 1137 aa16.75■□□□□ 0.27
CHMP1A-206ENST00000549139 KBTBD6Q86V97 674 aa16.75■□□□□ 0.27
CHMP1A-206ENST00000549139 C12orf50Q8NA57 414 aaPredicted RBP16.75■□□□□ 0.27
CHMP1A-206ENST00000549139 OR6B3Q8NGW1 331 aa16.75■□□□□ 0.27
CHMP1A-206ENST00000549139 TTC8Q8TAM2 541 aa16.75■□□□□ 0.27
CHMP1A-206ENST00000549139 TAS1R2Q8TE23 839 aa16.75■□□□□ 0.27
CHMP1A-206ENST00000549139 ZFYVE19Q96K21 471 aa16.75■□□□□ 0.27
CHMP1A-206ENST00000549139 MRPL45Q9BRJ2 306 aaKnown RBP16.75■□□□□ 0.27
CHMP1A-206ENST00000549139 SRRTQ9BXP5 876 aaKnown RBP16.75■□□□□ 0.27
CHMP1A-206ENST00000549139 IMPG2Q9BZV3 1241 aa16.75■□□□□ 0.27
CHMP1A-206ENST00000549139 SNX25Q9H3E2 840 aa16.75■□□□□ 0.27
CHMP1A-206ENST00000549139 SLITRK6Q9H5Y7 841 aa16.75■□□□□ 0.27
CHMP1A-206ENST00000549139 MMRN2Q9H8L6 949 aa16.75■□□□□ 0.27
CHMP1A-206ENST00000549139 TMLHEQ9NVH6 421 aa16.75■□□□□ 0.27
CHMP1A-206ENST00000549139 SLC27A5Q9Y2P5 690 aa16.75■□□□□ 0.27
CHMP1A-206ENST00000549139 PCDHB5Q9Y5E4 795 aa16.75■□□□□ 0.27
CHMP1A-206ENST00000549139 CACNA1EQ15878 2313 aa16.74■□□□□ 0.27
CHMP1A-206ENST00000549139 ALDH1A3P47895 512 aa16.74■□□□□ 0.27
CHMP1A-206ENST00000549139 MXI1P50539 228 aa16.74■□□□□ 0.27
CHMP1A-206ENST00000549139 MARSP56192 900 aaKnown RBP16.74■□□□□ 0.27
CHMP1A-206ENST00000549139 COL9A2Q14055 689 aaPredicted RBP16.74■□□□□ 0.27
CHMP1A-206ENST00000549139 CCDC40Q4G0X9 1142 aa16.74■□□□□ 0.27
CHMP1A-206ENST00000549139 CT47A1Q5JQC4 288 aaPredicted RBP16.74■□□□□ 0.27
CHMP1A-206ENST00000549139 GPIHBP1Q8IV16 184 aa16.74■□□□□ 0.27
CHMP1A-206ENST00000549139 FBXL13Q8NEE6 735 aa16.74■□□□□ 0.27
CHMP1A-206ENST00000549139 SLC35C1Q96A29 364 aa16.74■□□□□ 0.27
CHMP1A-206ENST00000549139 FAXDC2Q96IV6 333 aa16.74■□□□□ 0.27
CHMP1A-206ENST00000549139 SYT15Q9BQS2 421 aa16.74■□□□□ 0.27
CHMP1A-206ENST00000549139 OBP2AQ9NY56 170 aa16.74■□□□□ 0.27
CHMP1A-206ENST00000549139 DACH1Q9UI36 760 aa16.74■□□□□ 0.27
CHMP1A-206ENST00000549139 GTF3C4Q9UKN8 822 aa16.74■□□□□ 0.27
CHMP1A-206ENST00000549139 COQ4Q9Y3A0 265 aa16.74■□□□□ 0.27
CHMP1A-206ENST00000549139 ASB3Q9Y575 518 aa16.74■□□□□ 0.27
CHMP1A-206ENST00000549139 PMM2O15305 246 aa16.73■□□□□ 0.27
CHMP1A-206ENST00000549139 HCRTO43612 131 aa16.73■□□□□ 0.27
CHMP1A-206ENST00000549139 RPP40O75818 363 aaKnown RBP16.73■□□□□ 0.27
CHMP1A-206ENST00000549139 PDGFRBP09619 1106 aa16.73■□□□□ 0.27
CHMP1A-206ENST00000549139 HAPLN1P10915 354 aaPredicted RBP16.73■□□□□ 0.27
CHMP1A-206ENST00000549139 PXNP49023 591 aaPredicted RBP16.73■□□□□ 0.27
CHMP1A-206ENST00000549139 EPHB3P54753 998 aa16.73■□□□□ 0.27
CHMP1A-206ENST00000549139 CDH8P55286 799 aa16.73■□□□□ 0.27
CHMP1A-206ENST00000549139 MAPRE1Q15691 268 aaKnown RBP16.73■□□□□ 0.27
CHMP1A-206ENST00000549139 MGAT5BQ3V5L5 792 aa16.73■□□□□ 0.27
CHMP1A-206ENST00000549139 ARHGAP29Q52LW3 1261 aa16.73■□□□□ 0.27
CHMP1A-206ENST00000549139 DCAF17Q5H9S7 520 aaPredicted RBP16.73■□□□□ 0.27
CHMP1A-206ENST00000549139 GAREM2Q75VX8 874 aa16.73■□□□□ 0.27
CHMP1A-206ENST00000549139 CCDC150Q8NCX0 1101 aa16.73■□□□□ 0.27
CHMP1A-206ENST00000549139 FUBP3Q96I24 572 aaKnown RBP eCLIP16.73■□□□□ 0.27
CHMP1A-206ENST00000549139 ZC3H10Q96K80 434 aaKnown RBP16.73■□□□□ 0.27
CHMP1A-206ENST00000549139 MED15Q96RN5 788 aa16.73■□□□□ 0.27
CHMP1A-206ENST00000549139 PI4K2AQ9BTU6 479 aa16.73■□□□□ 0.27
CHMP1A-206ENST00000549139 SMOC1Q9H4F8 434 aa16.73■□□□□ 0.27
CHMP1A-206ENST00000549139 ABCB6Q9NP58 842 aa16.73■□□□□ 0.27
CHMP1A-206ENST00000549139 RAB20Q9NX57 234 aa16.73■□□□□ 0.27
CHMP1A-206ENST00000549139 ABI2Q9NYB9 513 aaPredicted RBP16.73■□□□□ 0.27
CHMP1A-206ENST00000549139 WASF3Q9UPY6 502 aa16.73■□□□□ 0.27
CHMP1A-206ENST00000549139 NME7Q9Y5B8 376 aa16.73■□□□□ 0.27
CHMP1A-206ENST00000549139 PCDHGA5Q9Y5G8 931 aa16.73■□□□□ 0.27
CHMP1A-206ENST00000549139 ABCA7Q8IZY2 2146 aa16.73■□□□□ 0.27
CHMP1A-206ENST00000549139 ZNF638Q14966 1978 aaKnown RBP16.72■□□□□ 0.27
CHMP1A-206ENST00000549139 A8MXQ7 604 aa16.72■□□□□ 0.27
CHMP1A-206ENST00000549139 C1QTNF9BB2RNN3 333 aa16.72■□□□□ 0.27
CHMP1A-206ENST00000549139 ATP2C2O75185 946 aa16.72■□□□□ 0.27
CHMP1A-206ENST00000549139 CLSTN1O94985 981 aa16.72■□□□□ 0.27
CHMP1A-206ENST00000549139 C1QTNF9P0C862 333 aa16.72■□□□□ 0.27
CHMP1A-206ENST00000549139 CCDC192P0DO97 292 aa16.72■□□□□ 0.27
CHMP1A-206ENST00000549139 HOXB3P14651 431 aaPredicted RBP16.72■□□□□ 0.27
CHMP1A-206ENST00000549139 ERCC5P28715 1186 aaPredicted RBP16.72■□□□□ 0.27
CHMP1A-206ENST00000549139 WEE1P30291 646 aa16.72■□□□□ 0.27
CHMP1A-206ENST00000549139 NOP14P78316 857 aaKnown RBP16.72■□□□□ 0.27
CHMP1A-206ENST00000549139 TNK2Q07912 1038 aa16.72■□□□□ 0.27
CHMP1A-206ENST00000549139 DPCR1Q3MIW9 517 aa16.72■□□□□ 0.27
CHMP1A-206ENST00000549139 CFAP221Q4G0U5 840 aa16.72■□□□□ 0.27
CHMP1A-206ENST00000549139 CBWD6Q4V339 395 aa16.72■□□□□ 0.27
CHMP1A-206ENST00000549139 CBWD3Q5JTY5 395 aa16.72■□□□□ 0.27
CHMP1A-206ENST00000549139 CBWD5Q5RIA9 395 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms