RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 SLITRK1Q96PX8 696 aa13.7□□□□□ -0.22
PTCH1-218ENST00000548945 FNBP1Q96RU3 617 aa13.7□□□□□ -0.22
PTCH1-218ENST00000548945 CGRRF1Q99675 332 aa13.7□□□□□ -0.22
PTCH1-218ENST00000548945 MAGEF1Q9HAY2 307 aa13.7□□□□□ -0.22
PTCH1-218ENST00000548945 AGPAT3Q9NRZ7 376 aa13.7□□□□□ -0.22
PTCH1-218ENST00000548945 CGNQ9P2M7 1197 aaKnown RBP13.7□□□□□ -0.22
PTCH1-218ENST00000548945 MMP17Q9ULZ9 603 aa13.7□□□□□ -0.22
PTCH1-218ENST00000548945 ZFHX4Q86UP3 3567 aa13.69□□□□□ -0.22
PTCH1-218ENST00000548945 A0A0A0MRY4 1105 aa13.69□□□□□ -0.22
PTCH1-218ENST00000548945 DCLK1O15075 740 aa13.69□□□□□ -0.22
PTCH1-218ENST00000548945 SPTLC2O15270 562 aa13.69□□□□□ -0.22
PTCH1-218ENST00000548945 TGFB1I1O43294 461 aa13.69□□□□□ -0.22
PTCH1-218ENST00000548945 STX6O43752 255 aa13.69□□□□□ -0.22
PTCH1-218ENST00000548945 KCNK5O95279 499 aa13.69□□□□□ -0.22
PTCH1-218ENST00000548945 CAVIN2O95810 425 aa13.69□□□□□ -0.22
PTCH1-218ENST00000548945 CST3P01034 146 aaPredicted RBP13.69□□□□□ -0.22
PTCH1-218ENST00000548945 DLATP10515 647 aaKnown RBP13.69□□□□□ -0.22
PTCH1-218ENST00000548945 PTPN1P18031 435 aaKnown RBP13.69□□□□□ -0.22
PTCH1-218ENST00000548945 TNNI1P19237 187 aa13.69□□□□□ -0.22
PTCH1-218ENST00000548945 KCNA4P22459 653 aa13.69□□□□□ -0.22
PTCH1-218ENST00000548945 ATICP31939 592 aa13.69□□□□□ -0.22
PTCH1-218ENST00000548945 TNNC1P63316 161 aa13.69□□□□□ -0.22
PTCH1-218ENST00000548945 ASIC1P78348 528 aa13.69□□□□□ -0.22
PTCH1-218ENST00000548945 CYP24A1Q07973 514 aa13.69□□□□□ -0.22
PTCH1-218ENST00000548945 WDR72Q3MJ13 1102 aa13.69□□□□□ -0.22
PTCH1-218ENST00000548945 C2orf27AQ580R0 203 aa13.69□□□□□ -0.22
PTCH1-218ENST00000548945 FAM26FQ5R3K3 315 aa13.69□□□□□ -0.22
PTCH1-218ENST00000548945 TDRD10Q5VZ19 366 aaKnown RBP13.69□□□□□ -0.22
PTCH1-218ENST00000548945 FILIP1Q7Z7B0 1213 aa13.69□□□□□ -0.22
PTCH1-218ENST00000548945 XXYLT1Q8NBI6 393 aa13.69□□□□□ -0.22
PTCH1-218ENST00000548945 PDZD8Q8NEN9 1154 aa13.69□□□□□ -0.22
PTCH1-218ENST00000548945 OR6B3Q8NGW1 331 aa13.69□□□□□ -0.22
PTCH1-218ENST00000548945 OVCA2Q8WZ82 227 aa13.69□□□□□ -0.22
PTCH1-218ENST00000548945 HPS3Q969F9 1004 aa13.69□□□□□ -0.22
PTCH1-218ENST00000548945 CHAMP1Q96JM3 812 aa13.69□□□□□ -0.22
PTCH1-218ENST00000548945 DUSP9Q99956 384 aaKnown RBP13.69□□□□□ -0.22
PTCH1-218ENST00000548945 C7orf25Q9BPX7 421 aa13.69□□□□□ -0.22
PTCH1-218ENST00000548945 MRPL45Q9BRJ2 306 aaKnown RBP13.69□□□□□ -0.22
PTCH1-218ENST00000548945 RNF38Q9H0F5 515 aa13.69□□□□□ -0.22
PTCH1-218ENST00000548945 SMOC1Q9H4F8 434 aa13.69□□□□□ -0.22
PTCH1-218ENST00000548945 TBC1D14Q9P2M4 693 aa13.69□□□□□ -0.22
PTCH1-218ENST00000548945 CPQQ9Y646 472 aa13.69□□□□□ -0.22
PTCH1-218ENST00000548945 TNRC6BQ9UPQ9 1833 aaKnown RBP13.69□□□□□ -0.22
PTCH1-218ENST00000548945 CEP192Q8TEP8 1941 aa13.68□□□□□ -0.22
PTCH1-218ENST00000548945 ALDH1A2O94788 518 aa13.68□□□□□ -0.22
PTCH1-218ENST00000548945 RTN3O95197 1032 aaPredicted RBP13.68□□□□□ -0.22
PTCH1-218ENST00000548945 ADH1CP00326 375 aa13.68□□□□□ -0.22
PTCH1-218ENST00000548945 GBP1P32455 592 aa13.68□□□□□ -0.22
PTCH1-218ENST00000548945 EHHADHQ08426 723 aa13.68□□□□□ -0.22
PTCH1-218ENST00000548945 TAF10Q12962 218 aa13.68□□□□□ -0.22
PTCH1-218ENST00000548945 DHCR24Q15392 516 aa13.68□□□□□ -0.22
PTCH1-218ENST00000548945 CRY1Q16526 586 aa13.68□□□□□ -0.22
PTCH1-218ENST00000548945 TCEAL6Q6IPX3 200 aa13.68□□□□□ -0.22
PTCH1-218ENST00000548945 UNC13DQ70J99 1090 aa13.68□□□□□ -0.22
PTCH1-218ENST00000548945 HS2ST1Q7LGA3 356 aa13.68□□□□□ -0.22
PTCH1-218ENST00000548945 C12orf56Q8IXR9 622 aa13.68□□□□□ -0.22
PTCH1-218ENST00000548945 B3GALNT2Q8NCR0 500 aa13.68□□□□□ -0.22
PTCH1-218ENST00000548945 TCEAL3Q969E4 200 aa13.68□□□□□ -0.22
PTCH1-218ENST00000548945 SYAP1Q96A49 352 aaPredicted RBP13.68□□□□□ -0.22
PTCH1-218ENST00000548945 OTUB2Q96DC9 234 aa13.68□□□□□ -0.22
PTCH1-218ENST00000548945 ZNF396Q96N95 335 aaPredicted RBP13.68□□□□□ -0.22
PTCH1-218ENST00000548945 PNKPQ96T60 521 aa13.68□□□□□ -0.22
PTCH1-218ENST00000548945 EDEM2Q9BV94 578 aa13.68□□□□□ -0.22
PTCH1-218ENST00000548945 VRTNQ9H8Y1 702 aa13.68□□□□□ -0.22
PTCH1-218ENST00000548945 NME7Q9Y5B8 376 aa13.68□□□□□ -0.22
PTCH1-218ENST00000548945 AKAP13Q12802 2813 aa13.68□□□□□ -0.22
PTCH1-218ENST00000548945 ATP8B3O60423 1300 aa13.67□□□□□ -0.22
PTCH1-218ENST00000548945 E2F8A0AVK6 867 aa13.67□□□□□ -0.22
PTCH1-218ENST00000548945 A8MXQ7 604 aa13.67□□□□□ -0.22
PTCH1-218ENST00000548945 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.67□□□□□ -0.22
PTCH1-218ENST00000548945 CUTAO60888 179 aa13.67□□□□□ -0.22
PTCH1-218ENST00000548945 YEATS4O95619 227 aa13.67□□□□□ -0.22
PTCH1-218ENST00000548945 APODP05090 189 aa13.67□□□□□ -0.22
PTCH1-218ENST00000548945 TNFRSF4P43489 277 aa13.67□□□□□ -0.22
PTCH1-218ENST00000548945 CYP2J2P51589 502 aa13.67□□□□□ -0.22
PTCH1-218ENST00000548945 SEC13P55735 322 aa13.67□□□□□ -0.22
PTCH1-218ENST00000548945 TRPC3Q13507 836 aa13.67□□□□□ -0.22
PTCH1-218ENST00000548945 BMT2Q1RMZ1 405 aa13.67□□□□□ -0.22
PTCH1-218ENST00000548945 SNX30Q5VWJ9 437 aa13.67□□□□□ -0.22
PTCH1-218ENST00000548945 DAB2IPQ5VWQ8 1189 aa13.67□□□□□ -0.22
PTCH1-218ENST00000548945 ANO7Q6IWH7 933 aa13.67□□□□□ -0.22
PTCH1-218ENST00000548945 NUP93Q8N1F7 819 aa13.67□□□□□ -0.22
PTCH1-218ENST00000548945 RDH13Q8NBN7 331 aa13.67□□□□□ -0.22
PTCH1-218ENST00000548945 MDGA1Q8NFP4 955 aa13.67□□□□□ -0.22
PTCH1-218ENST00000548945 OLIG1Q8TAK6 271 aa13.67□□□□□ -0.22
PTCH1-218ENST00000548945 SCFD1Q8WVM8 642 aa13.67□□□□□ -0.22
PTCH1-218ENST00000548945 CCDC127Q96BQ5 260 aa13.67□□□□□ -0.22
PTCH1-218ENST00000548945 DHX58Q96C10 678 aa13.67□□□□□ -0.22
PTCH1-218ENST00000548945 XYLT2Q9H1B5 865 aa13.67□□□□□ -0.22
PTCH1-218ENST00000548945 TMEM30AQ9NV96 361 aa13.67□□□□□ -0.22
PTCH1-218ENST00000548945 CFAP97Q9P2B7 532 aa13.67□□□□□ -0.22
PTCH1-218ENST00000548945 CACNA1EQ15878 2313 aa13.67□□□□□ -0.22
PTCH1-218ENST00000548945 ASPMQ8IZT6 3477 aa13.66□□□□□ -0.22
PTCH1-218ENST00000548945 PVALEFA0A1B0GWK0 134 aa13.66□□□□□ -0.22
PTCH1-218ENST00000548945 LNP1A1A4G5 178 aa13.66□□□□□ -0.22
PTCH1-218ENST00000548945 KHNYNO15037 678 aaKnown RBP13.66□□□□□ -0.22
PTCH1-218ENST00000548945 CLIC2O15247 247 aa13.66□□□□□ -0.22
PTCH1-218ENST00000548945 KAT7O95251 611 aa13.66□□□□□ -0.22
PTCH1-218ENST00000548945 ABL1P00519 1130 aa13.66□□□□□ -0.22
PTCH1-218ENST00000548945 CHRM1P11229 460 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms