RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 KIF11P52732 1056 aa22.25■■□□□ 1.15
CACNB3-210ENST00000548874 USP46P62068 366 aa22.25■■□□□ 1.15
CACNB3-210ENST00000548874 TRIM72Q6ZMU5 477 aa22.25■■□□□ 1.15
CACNB3-210ENST00000548874 TMC8Q8IU68 726 aa22.25■■□□□ 1.15
CACNB3-210ENST00000548874 TMEM35BQ8NCS4 154 aa22.25■■□□□ 1.15
CACNB3-210ENST00000548874 HSFY1Q96LI6 401 aa22.25■■□□□ 1.15
CACNB3-210ENST00000548874 PDCL3Q9H2J4 239 aa22.25■■□□□ 1.15
CACNB3-210ENST00000548874 HCFC1R1Q9NWW0 138 aa22.25■■□□□ 1.15
CACNB3-210ENST00000548874 COMMD8Q9NX08 183 aa22.25■■□□□ 1.15
CACNB3-210ENST00000548874 ARHGAP20Q9P2F6 1191 aa22.25■■□□□ 1.15
CACNB3-210ENST00000548874 COG5Q9UP83 839 aa22.25■■□□□ 1.15
CACNB3-210ENST00000548874 CEP83Q9Y592 693 aa22.25■■□□□ 1.15
CACNB3-210ENST00000548874 H3BQ06 376 aaPredicted RBP22.24■■□□□ 1.15
CACNB3-210ENST00000548874 RTN3O95197 1032 aaPredicted RBP22.24■■□□□ 1.15
CACNB3-210ENST00000548874 PTPN2P17706 415 aa22.24■■□□□ 1.15
CACNB3-210ENST00000548874 NOMO3P69849 1222 aa22.24■■□□□ 1.15
CACNB3-210ENST00000548874 PDCLQ13371 301 aa22.24■■□□□ 1.15
CACNB3-210ENST00000548874 SPC24Q8NBT2 197 aa22.24■■□□□ 1.15
CACNB3-210ENST00000548874 C1orf131Q8NDD1 294 aaKnown RBP22.24■■□□□ 1.15
CACNB3-210ENST00000548874 SCAMP5Q8TAC9 235 aa22.24■■□□□ 1.15
CACNB3-210ENST00000548874 SLC4A5Q9BY07 1137 aa22.24■■□□□ 1.15
CACNB3-210ENST00000548874 PIDD1Q9HB75 910 aa22.24■■□□□ 1.15
CACNB3-210ENST00000548874 IL21Q9HBE4 155 aa22.24■■□□□ 1.15
CACNB3-210ENST00000548874 ZNF334Q9HCZ1 680 aaPredicted RBP22.24■■□□□ 1.15
CACNB3-210ENST00000548874 CYLDQ9NQC7 956 aa22.24■■□□□ 1.15
CACNB3-210ENST00000548874 AVENQ9NQS1 362 aaPredicted RBP22.24■■□□□ 1.15
CACNB3-210ENST00000548874 EHD2Q9NZN4 543 aa22.24■■□□□ 1.15
CACNB3-210ENST00000548874 USP3Q9Y6I4 520 aa22.24■■□□□ 1.15
CACNB3-210ENST00000548874 C2orf16Q68DN1 1984 aa22.23■■□□□ 1.15
CACNB3-210ENST00000548874 SLC34A2O95436 690 aa22.23■■□□□ 1.15
CACNB3-210ENST00000548874 PLEKP08567 350 aaPredicted RBP22.23■■□□□ 1.15
CACNB3-210ENST00000548874 UNGP13051 313 aaPredicted RBP22.23■■□□□ 1.15
CACNB3-210ENST00000548874 RGS7P49802 495 aa22.23■■□□□ 1.15
CACNB3-210ENST00000548874 CDK17Q00537 523 aa22.23■■□□□ 1.15
CACNB3-210ENST00000548874 TSR1Q2NL82 804 aaKnown RBP22.23■■□□□ 1.15
CACNB3-210ENST00000548874 TDRD12Q587J7 1177 aaKnown RBP22.23■■□□□ 1.15
CACNB3-210ENST00000548874 CES5AQ6NT32 575 aa22.23■■□□□ 1.15
CACNB3-210ENST00000548874 GRASPQ7Z6J2 395 aaPredicted RBP22.23■■□□□ 1.15
CACNB3-210ENST00000548874 HS6ST3Q8IZP7 471 aa22.23■■□□□ 1.15
CACNB3-210ENST00000548874 LEMD2Q8NC56 503 aa22.23■■□□□ 1.15
CACNB3-210ENST00000548874 SUSD6Q92537 303 aa22.23■■□□□ 1.15
CACNB3-210ENST00000548874 CORO1BQ9BR76 489 aa22.23■■□□□ 1.15
CACNB3-210ENST00000548874 ASAH2Q9NR71 780 aa22.23■■□□□ 1.15
CACNB3-210ENST00000548874 ZNHIT6Q9NWK9 470 aaKnown RBP22.23■■□□□ 1.15
CACNB3-210ENST00000548874 CDH22Q9UJ99 828 aa22.23■■□□□ 1.15
CACNB3-210ENST00000548874 RHOP08100 348 aa22.22■■□□□ 1.15
CACNB3-210ENST00000548874 TNFAIP3P21580 790 aa22.22■■□□□ 1.15
CACNB3-210ENST00000548874 CLUL1Q15846 466 aa22.22■■□□□ 1.15
CACNB3-210ENST00000548874 TAF12Q16514 161 aa22.22■■□□□ 1.15
CACNB3-210ENST00000548874 CLEC16AQ2KHT3 1053 aa22.22■■□□□ 1.15
CACNB3-210ENST00000548874 TMEM110Q86TL2 294 aa22.22■■□□□ 1.15
CACNB3-210ENST00000548874 SLC30A5Q8TAD4 765 aa22.22■■□□□ 1.15
CACNB3-210ENST00000548874 NOX5Q96PH1 765 aa22.22■■□□□ 1.15
CACNB3-210ENST00000548874 PANX2Q96RD6 677 aa22.22■■□□□ 1.15
CACNB3-210ENST00000548874 FBXO44Q9H4M3 255 aa22.22■■□□□ 1.15
CACNB3-210ENST00000548874 LRRC4Q9HBW1 653 aa22.22■■□□□ 1.15
CACNB3-210ENST00000548874 UXTQ9UBK9 157 aaPredicted RBP22.22■■□□□ 1.15
CACNB3-210ENST00000548874 MAGED2Q9UNF1 606 aaPredicted RBP22.22■■□□□ 1.15
CACNB3-210ENST00000548874 NOTCH4Q99466 2003 aa22.22■■□□□ 1.15
CACNB3-210ENST00000548874 SSU72P8A0A1W2PR75 194 aa22.21■■□□□ 1.15
CACNB3-210ENST00000548874 DDX3XO00571 662 aaKnown RBP eCLIP22.21■■□□□ 1.15
CACNB3-210ENST00000548874 FECHP22830 423 aa22.21■■□□□ 1.15
CACNB3-210ENST00000548874 YWHAQP27348 245 aa22.21■■□□□ 1.15
CACNB3-210ENST00000548874 MTHFRP42898 656 aa22.21■■□□□ 1.15
CACNB3-210ENST00000548874 ACADSBP45954 432 aa22.21■■□□□ 1.15
CACNB3-210ENST00000548874 TKTL1P51854 596 aa22.21■■□□□ 1.15
CACNB3-210ENST00000548874 NTHL1P78549 312 aa22.21■■□□□ 1.15
CACNB3-210ENST00000548874 CENPCQ03188 943 aa22.21■■□□□ 1.15
CACNB3-210ENST00000548874 ADIGQ0VDE8 80 aa22.21■■□□□ 1.15
CACNB3-210ENST00000548874 MAPK8IP2Q13387 824 aaPredicted RBP22.21■■□□□ 1.15
CACNB3-210ENST00000548874 SMAD4Q13485 552 aaKnown RBP22.21■■□□□ 1.15
CACNB3-210ENST00000548874 LEXMQ3ZCV2 418 aa22.21■■□□□ 1.15
CACNB3-210ENST00000548874 PTPN20Q4JDL3 420 aa22.21■■□□□ 1.15
CACNB3-210ENST00000548874 PABPC1LQ4VXU2 614 aaKnown RBP22.21■■□□□ 1.15
CACNB3-210ENST00000548874 PRSS36Q5K4E3 855 aa22.21■■□□□ 1.15
CACNB3-210ENST00000548874 ATAT1Q5SQI0 421 aa22.21■■□□□ 1.15
CACNB3-210ENST00000548874 NAA35Q5VZE5 725 aa22.21■■□□□ 1.15
CACNB3-210ENST00000548874 PM20D1Q6GTS8 502 aa22.21■■□□□ 1.15
CACNB3-210ENST00000548874 TMEM150AQ86TG1 271 aa22.21■■□□□ 1.15
CACNB3-210ENST00000548874 SCML4Q8N228 414 aa22.21■■□□□ 1.15
CACNB3-210ENST00000548874 RIPOR3Q96MK2 946 aa22.21■■□□□ 1.15
CACNB3-210ENST00000548874 CPXM1Q96SM3 734 aa22.21■■□□□ 1.15
CACNB3-210ENST00000548874 WDR6Q9NNW5 1121 aaKnown RBP22.21■■□□□ 1.15
CACNB3-210ENST00000548874 SCML2Q9UQR0 700 aa22.21■■□□□ 1.15
CACNB3-210ENST00000548874 USP15Q9Y4E8 981 aaPredicted RBP22.21■■□□□ 1.15
CACNB3-210ENST00000548874 DOCK6Q96HP0 2047 aa22.2■■□□□ 1.14
CACNB3-210ENST00000548874 GRXCR2A6NFK2 248 aa22.2■■□□□ 1.14
CACNB3-210ENST00000548874 TADA3O75528 432 aa22.2■■□□□ 1.14
CACNB3-210ENST00000548874 F11P03951 625 aa22.2■■□□□ 1.14
CACNB3-210ENST00000548874 CCR2P41597 374 aa22.2■■□□□ 1.14
CACNB3-210ENST00000548874 SLC5A9Q2M3M2 681 aa22.2■■□□□ 1.14
CACNB3-210ENST00000548874 ASTE1Q2TB18 679 aaPredicted RBP22.2■■□□□ 1.14
CACNB3-210ENST00000548874 GAREM2Q75VX8 874 aa22.2■■□□□ 1.14
CACNB3-210ENST00000548874 CCDC186Q7Z3E2 898 aa22.2■■□□□ 1.14
CACNB3-210ENST00000548874 CPA5Q8WXQ8 436 aa22.2■■□□□ 1.14
CACNB3-210ENST00000548874 PPP1R13BQ96KQ4 1090 aa22.2■■□□□ 1.14
CACNB3-210ENST00000548874 CHP1Q99653 195 aa22.2■■□□□ 1.14
CACNB3-210ENST00000548874 ULBP1Q9BZM6 244 aa22.2■■□□□ 1.14
CACNB3-210ENST00000548874 CNGB3Q9NQW8 809 aa22.2■■□□□ 1.14
CACNB3-210ENST00000548874 PRDM6Q9NQX0 595 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms