RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 LONP2Q86WA8 852 aa21.22■□□□□ 0.99
CTDSP2-204ENST00000548823 FAM160A2Q8N612 972 aaPredicted RBP21.22■□□□□ 0.99
CTDSP2-204ENST00000548823 KDF1Q8NAX2 398 aaPredicted RBP21.22■□□□□ 0.99
CTDSP2-204ENST00000548823 MNS1Q8NEH6 495 aa21.22■□□□□ 0.99
CTDSP2-204ENST00000548823 SLC30A5Q8TAD4 765 aa21.22■□□□□ 0.99
CTDSP2-204ENST00000548823 CCDC127Q96BQ5 260 aa21.22■□□□□ 0.99
CTDSP2-204ENST00000548823 NT5C1BQ96P26 610 aa21.22■□□□□ 0.99
CTDSP2-204ENST00000548823 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.22■□□□□ 0.99
CTDSP2-204ENST00000548823 NAGPAQ9UK23 515 aa21.22■□□□□ 0.99
CTDSP2-204ENST00000548823 SPEGQ15772 3267 aa21.21■□□□□ 0.99
CTDSP2-204ENST00000548823 ANK1P16157 1881 aa21.21■□□□□ 0.99
CTDSP2-204ENST00000548823 ZFYVE26Q68DK2 2539 aa21.21■□□□□ 0.99
CTDSP2-204ENST00000548823 EFCAB8A8MWE9 144 aa21.21■□□□□ 0.99
CTDSP2-204ENST00000548823 C1QTNF9BB2RNN3 333 aa21.21■□□□□ 0.99
CTDSP2-204ENST00000548823 CLDN3O15551 220 aa21.21■□□□□ 0.99
CTDSP2-204ENST00000548823 TSPAN1O60635 241 aa21.21■□□□□ 0.99
CTDSP2-204ENST00000548823 EDN1P05305 212 aa21.21■□□□□ 0.99
CTDSP2-204ENST00000548823 C1QTNF9P0C862 333 aa21.21■□□□□ 0.99
CTDSP2-204ENST00000548823 PROZP22891 400 aa21.21■□□□□ 0.99
CTDSP2-204ENST00000548823 MCL1Q07820 350 aa21.21■□□□□ 0.99
CTDSP2-204ENST00000548823 ZACNQ401N2 412 aa21.21■□□□□ 0.99
CTDSP2-204ENST00000548823 FAM171A1Q5VUB5 890 aa21.21■□□□□ 0.99
CTDSP2-204ENST00000548823 ALKBH5Q6P6C2 394 aaKnown RBP21.21■□□□□ 0.99
CTDSP2-204ENST00000548823 CEP57Q86XR8 500 aa21.21■□□□□ 0.99
CTDSP2-204ENST00000548823 ARHGEF19Q8IW93 802 aa21.21■□□□□ 0.99
CTDSP2-204ENST00000548823 SPEM1Q8N4L4 309 aa21.21■□□□□ 0.99
CTDSP2-204ENST00000548823 CEP112Q8N8E3 955 aa21.21■□□□□ 0.99
CTDSP2-204ENST00000548823 C12orf50Q8NA57 414 aaPredicted RBP21.21■□□□□ 0.99
CTDSP2-204ENST00000548823 ANKRD7Q92527 254 aa21.21■□□□□ 0.99
CTDSP2-204ENST00000548823 IRF7Q92985 503 aa21.21■□□□□ 0.99
CTDSP2-204ENST00000548823 ALS2CR12Q96Q35 445 aa21.21■□□□□ 0.99
CTDSP2-204ENST00000548823 FNBP1Q96RU3 617 aa21.21■□□□□ 0.99
CTDSP2-204ENST00000548823 TRPV5Q9NQA5 729 aa21.21■□□□□ 0.99
CTDSP2-204ENST00000548823 AVENQ9NQS1 362 aaPredicted RBP21.21■□□□□ 0.99
CTDSP2-204ENST00000548823 TFR2Q9UP52 801 aa21.21■□□□□ 0.99
CTDSP2-204ENST00000548823 JRKLQ9Y4A0 524 aa21.21■□□□□ 0.99
CTDSP2-204ENST00000548823 DUSP10Q9Y6W6 482 aa21.21■□□□□ 0.99
CTDSP2-204ENST00000548823 ABLIM1O14639 778 aa21.2■□□□□ 0.98
CTDSP2-204ENST00000548823 OGTO15294 1046 aa21.2■□□□□ 0.98
CTDSP2-204ENST00000548823 ADAM12O43184 909 aa21.2■□□□□ 0.98
CTDSP2-204ENST00000548823 KCNK5O95279 499 aa21.2■□□□□ 0.98
CTDSP2-204ENST00000548823 PAPSS2O95340 614 aaPredicted RBP21.2■□□□□ 0.98
CTDSP2-204ENST00000548823 C4BPAP04003 597 aaKnown RBP21.2■□□□□ 0.98
CTDSP2-204ENST00000548823 RHOP08100 348 aa21.2■□□□□ 0.98
CTDSP2-204ENST00000548823 CHRNB1P11230 501 aa21.2■□□□□ 0.98
CTDSP2-204ENST00000548823 PRLRP16471 622 aa21.2■□□□□ 0.98
CTDSP2-204ENST00000548823 POU5F1Q01860 360 aaKnown RBP21.2■□□□□ 0.98
CTDSP2-204ENST00000548823 RAB33AQ14088 237 aa21.2■□□□□ 0.98
CTDSP2-204ENST00000548823 POTEHQ6S545 545 aa21.2■□□□□ 0.98
CTDSP2-204ENST00000548823 TRAPPC11Q7Z392 1133 aa21.2■□□□□ 0.98
CTDSP2-204ENST00000548823 BRSK2Q8IWQ3 736 aa21.2■□□□□ 0.98
CTDSP2-204ENST00000548823 OLIG1Q8TAK6 271 aa21.2■□□□□ 0.98
CTDSP2-204ENST00000548823 SHC3Q92529 594 aa21.2■□□□□ 0.98
CTDSP2-204ENST00000548823 SEMA4DQ92854 862 aa21.2■□□□□ 0.98
CTDSP2-204ENST00000548823 CPB2Q96IY4 423 aa21.2■□□□□ 0.98
CTDSP2-204ENST00000548823 ZBTB45Q96K62 511 aaPredicted RBP21.2■□□□□ 0.98
CTDSP2-204ENST00000548823 NOX5Q96PH1 765 aa21.2■□□□□ 0.98
CTDSP2-204ENST00000548823 CGRRF1Q99675 332 aa21.2■□□□□ 0.98
CTDSP2-204ENST00000548823 TRMT61BQ9BVS5 477 aaKnown RBP21.2■□□□□ 0.98
CTDSP2-204ENST00000548823 CARD6Q9BX69 1037 aa21.2■□□□□ 0.98
CTDSP2-204ENST00000548823 TRIM6Q9C030 488 aaPredicted RBP21.2■□□□□ 0.98
CTDSP2-204ENST00000548823 NXF3Q9H4D5 531 aaKnown RBP21.2■□□□□ 0.98
CTDSP2-204ENST00000548823 RBAKQ9NYW8 714 aaPredicted RBP21.2■□□□□ 0.98
CTDSP2-204ENST00000548823 COL4A2P08572 1712 aa21.19■□□□□ 0.98
CTDSP2-204ENST00000548823 A0A0A6YYK5 440 aaPredicted RBP21.19■□□□□ 0.98
CTDSP2-204ENST00000548823 FOXN3O00409 490 aaPredicted RBP21.19■□□□□ 0.98
CTDSP2-204ENST00000548823 FAM189A1O60320 539 aa21.19■□□□□ 0.98
CTDSP2-204ENST00000548823 TADA3O75528 432 aa21.19■□□□□ 0.98
CTDSP2-204ENST00000548823 ZNF806P0C7X5 589 aa21.19■□□□□ 0.98
CTDSP2-204ENST00000548823 AKAP5P24588 427 aa21.19■□□□□ 0.98
CTDSP2-204ENST00000548823 GCNT1Q02742 428 aa21.19■□□□□ 0.98
CTDSP2-204ENST00000548823 GAS6Q14393 721 aa21.19■□□□□ 0.98
CTDSP2-204ENST00000548823 GRM2Q14416 872 aa21.19■□□□□ 0.98
CTDSP2-204ENST00000548823 SF3A2Q15428 464 aaKnown RBP21.19■□□□□ 0.98
CTDSP2-204ENST00000548823 ARHGAP44Q17R89 818 aa21.19■□□□□ 0.98
CTDSP2-204ENST00000548823 SLC5A9Q2M3M2 681 aa21.19■□□□□ 0.98
CTDSP2-204ENST00000548823 STPG1Q5TH74 334 aa21.19■□□□□ 0.98
CTDSP2-204ENST00000548823 CEP68Q76N32 757 aa21.19■□□□□ 0.98
CTDSP2-204ENST00000548823 FAM71AQ8IYT1 594 aa21.19■□□□□ 0.98
CTDSP2-204ENST00000548823 ZNF516Q92618 1163 aa21.19■□□□□ 0.98
CTDSP2-204ENST00000548823 PAAF1Q9BRP4 392 aa21.19■□□□□ 0.98
CTDSP2-204ENST00000548823 ZFP14Q9HCL3 533 aa21.19■□□□□ 0.98
CTDSP2-204ENST00000548823 ZNF334Q9HCZ1 680 aaPredicted RBP21.19■□□□□ 0.98
CTDSP2-204ENST00000548823 PTPRHQ9HD43 1115 aa21.19■□□□□ 0.98
CTDSP2-204ENST00000548823 PRMT7Q9NVM4 692 aaPredicted RBP21.19■□□□□ 0.98
CTDSP2-204ENST00000548823 MACROD2A1Z1Q3 448 aa21.18■□□□□ 0.98
CTDSP2-204ENST00000548823 DDX3XO00571 662 aaKnown RBP eCLIP21.18■□□□□ 0.982e-15■■□□□ 12.3
CTDSP2-204ENST00000548823 DLATP10515 647 aaKnown RBP21.18■□□□□ 0.98
CTDSP2-204ENST00000548823 FCARP24071 287 aa21.18■□□□□ 0.98
CTDSP2-204ENST00000548823 IFI16Q16666 785 aaKnown RBP21.18■□□□□ 0.98
CTDSP2-204ENST00000548823 MPZL3Q6UWV2 235 aa21.18■□□□□ 0.98
CTDSP2-204ENST00000548823 TAS1R2Q8TE23 839 aa21.18■□□□□ 0.98
CTDSP2-204ENST00000548823 HASPINQ8TF76 798 aa21.18■□□□□ 0.98
CTDSP2-204ENST00000548823 TOPORSQ9NS56 1045 aaPredicted RBP21.18■□□□□ 0.98
CTDSP2-204ENST00000548823 CACNG4Q9UBN1 327 aa21.18■□□□□ 0.98
CTDSP2-204ENST00000548823 TNFSF13BQ9Y275 285 aa21.18■□□□□ 0.98
CTDSP2-204ENST00000548823 PIAS3Q9Y6X2 628 aa21.18■□□□□ 0.98
CTDSP2-204ENST00000548823 TICRRQ7Z2Z1 1910 aa21.17■□□□□ 0.98
CTDSP2-204ENST00000548823 SOBPA7XYQ1 873 aa21.17■□□□□ 0.98
CTDSP2-204ENST00000548823 K7ESF4 209 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms