RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 FSCN3Q9NQT6 498 aa12.76□□□□□ -0.37
TRAFD1-205ENST00000548277 BCCIPQ9P287 314 aaKnown RBP eCLIP12.76□□□□□ -0.37
TRAFD1-205ENST00000548277 CFAP97Q9P2B7 532 aa12.76□□□□□ -0.37
TRAFD1-205ENST00000548277 ZMIZ1Q9ULJ6 1067 aa12.76□□□□□ -0.37
TRAFD1-205ENST00000548277 MMP17Q9ULZ9 603 aa12.76□□□□□ -0.37
TRAFD1-205ENST00000548277 NME7Q9Y5B8 376 aa12.76□□□□□ -0.37
TRAFD1-205ENST00000548277 ZNF840PA6NDX5 716 aa12.75□□□□□ -0.37
TRAFD1-205ENST00000548277 CLIC2O15247 247 aa12.75□□□□□ -0.37
TRAFD1-205ENST00000548277 CACNA1GO43497 2377 aa12.75□□□□□ -0.37
TRAFD1-205ENST00000548277 CLSTN1O94985 981 aa12.75□□□□□ -0.37
TRAFD1-205ENST00000548277 APODP05090 189 aa12.75□□□□□ -0.37
TRAFD1-205ENST00000548277 DLATP10515 647 aaKnown RBP12.75□□□□□ -0.37
TRAFD1-205ENST00000548277 MBL2P11226 248 aaPredicted RBP12.75□□□□□ -0.37
TRAFD1-205ENST00000548277 GNL1P36915 607 aaPredicted RBP12.75□□□□□ -0.37
TRAFD1-205ENST00000548277 CACNA2D1P54289 1103 aa12.75□□□□□ -0.37
TRAFD1-205ENST00000548277 TAF10Q12962 218 aa12.75□□□□□ -0.37
TRAFD1-205ENST00000548277 TDRD10Q5VZ19 366 aaKnown RBP12.75□□□□□ -0.37
TRAFD1-205ENST00000548277 RHBDF2Q6PJF5 856 aa12.75□□□□□ -0.37
TRAFD1-205ENST00000548277 VSTM1Q6UX27 236 aa12.75□□□□□ -0.37
TRAFD1-205ENST00000548277 UNQ6494/PRO21346Q6UXR6 183 aa12.75□□□□□ -0.37
TRAFD1-205ENST00000548277 DPH6Q7L8W6 267 aa12.75□□□□□ -0.37
TRAFD1-205ENST00000548277 SPATA18Q8TC71 538 aa12.75□□□□□ -0.37
TRAFD1-205ENST00000548277 HMGB4Q8WW32 186 aa12.75□□□□□ -0.37
TRAFD1-205ENST00000548277 ELMO3Q96BJ8 720 aa12.75□□□□□ -0.37
TRAFD1-205ENST00000548277 SPATA17Q96L03 361 aa12.75□□□□□ -0.37
TRAFD1-205ENST00000548277 CNOT6LQ96LI5 555 aaKnown RBP12.75□□□□□ -0.37
TRAFD1-205ENST00000548277 PNKPQ96T60 521 aa12.75□□□□□ -0.37
TRAFD1-205ENST00000548277 ATXN2Q99700 1313 aaKnown RBP12.75□□□□□ -0.37
TRAFD1-205ENST00000548277 DPEP3Q9H4B8 488 aa12.75□□□□□ -0.37
TRAFD1-205ENST00000548277 FOXD4L1Q9NU39 408 aa12.75□□□□□ -0.37
TRAFD1-205ENST00000548277 TMEM74BQ9NUR3 256 aa12.75□□□□□ -0.37
TRAFD1-205ENST00000548277 CHORDC1Q9UHD1 332 aaPredicted RBP12.75□□□□□ -0.37
TRAFD1-205ENST00000548277 PLXND1Q9Y4D7 1925 aa12.74□□□□□ -0.37
TRAFD1-205ENST00000548277 TRIM66O15016 1216 aa12.74□□□□□ -0.37
TRAFD1-205ENST00000548277 ALDH1A2O94788 518 aa12.74□□□□□ -0.37
TRAFD1-205ENST00000548277 KAT7O95251 611 aa12.74□□□□□ -0.37
TRAFD1-205ENST00000548277 TNNI1P19237 187 aa12.74□□□□□ -0.37
TRAFD1-205ENST00000548277 WARSP23381 471 aaKnown RBP12.74□□□□□ -0.37
TRAFD1-205ENST00000548277 WASP42768 502 aa12.74□□□□□ -0.37
TRAFD1-205ENST00000548277 PTGER3P43115 390 aa12.74□□□□□ -0.37
TRAFD1-205ENST00000548277 PDE6CP51160 858 aa12.74□□□□□ -0.37
TRAFD1-205ENST00000548277 MRPS21P82921 87 aaKnown RBP12.74□□□□□ -0.37
TRAFD1-205ENST00000548277 RESTQ13127 1097 aa12.74□□□□□ -0.37
TRAFD1-205ENST00000548277 MAPRE1Q15691 268 aaKnown RBP12.74□□□□□ -0.37
TRAFD1-205ENST00000548277 TRIM61Q5EBN2 209 aa12.74□□□□□ -0.37
TRAFD1-205ENST00000548277 CCDC73Q6ZRK6 1079 aa12.74□□□□□ -0.37
TRAFD1-205ENST00000548277 TRAPPC11Q7Z392 1133 aa12.74□□□□□ -0.37
TRAFD1-205ENST00000548277 RASSF3Q86WH2 238 aa12.74□□□□□ -0.37
TRAFD1-205ENST00000548277 CCDC65Q8IXS2 484 aa12.74□□□□□ -0.37
TRAFD1-205ENST00000548277 IL17RCQ8NAC3 791 aa12.74□□□□□ -0.37
TRAFD1-205ENST00000548277 CCDC26Q8TAB7 109 aa12.74□□□□□ -0.37
TRAFD1-205ENST00000548277 MYCBPAPQ8TBZ2 947 aa12.74□□□□□ -0.37
TRAFD1-205ENST00000548277 CCDC127Q96BQ5 260 aa12.74□□□□□ -0.37
TRAFD1-205ENST00000548277 SCNM1Q9BWG6 230 aa12.74□□□□□ -0.37
TRAFD1-205ENST00000548277 POLMQ9NP87 494 aaPredicted RBP12.74□□□□□ -0.37
TRAFD1-205ENST00000548277 ARHGEF4Q9NR80 690 aa12.74□□□□□ -0.37
TRAFD1-205ENST00000548277 OLFML3Q9NRN5 406 aa12.74□□□□□ -0.37
TRAFD1-205ENST00000548277 HSPBP1Q9NZL4 362 aa12.74□□□□□ -0.37
TRAFD1-205ENST00000548277 NXF1Q9UBU9 619 aaKnown RBP12.74□□□□□ -0.37
TRAFD1-205ENST00000548277 MBD1Q9UIS9 605 aaPredicted RBP12.74□□□□□ -0.37
TRAFD1-205ENST00000548277 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.73□□□□□ -0.37
TRAFD1-205ENST00000548277 TCRBV21S2A2A0A5A6 115 aa12.73□□□□□ -0.37
TRAFD1-205ENST00000548277 TBC1D3BA6NDS4 549 aa12.73□□□□□ -0.37
TRAFD1-205ENST00000548277 A8MXQ7 604 aa12.73□□□□□ -0.37
TRAFD1-205ENST00000548277 ADH5P11766 374 aa12.73□□□□□ -0.37
TRAFD1-205ENST00000548277 TCF3P15923 654 aa12.73□□□□□ -0.37
TRAFD1-205ENST00000548277 PTPN1P18031 435 aaKnown RBP12.73□□□□□ -0.37
TRAFD1-205ENST00000548277 PDCP20941 246 aa12.73□□□□□ -0.37
TRAFD1-205ENST00000548277 CYP2J2P51589 502 aa12.73□□□□□ -0.37
TRAFD1-205ENST00000548277 ALCAMQ13740 583 aa12.73□□□□□ -0.37
TRAFD1-205ENST00000548277 SURF1Q15526 300 aa12.73□□□□□ -0.37
TRAFD1-205ENST00000548277 WDR72Q3MJ13 1102 aa12.73□□□□□ -0.37
TRAFD1-205ENST00000548277 LY6G5CQ5SRR4 150 aa12.73□□□□□ -0.37
TRAFD1-205ENST00000548277 LPCAT2Q7L5N7 544 aa12.73□□□□□ -0.37
TRAFD1-205ENST00000548277 NELFCDQ8IXH7 590 aa12.73□□□□□ -0.37
TRAFD1-205ENST00000548277 FNBP1Q96RU3 617 aa12.73□□□□□ -0.37
TRAFD1-205ENST00000548277 KCNK16Q96T55 309 aa12.73□□□□□ -0.37
TRAFD1-205ENST00000548277 NUSAP1Q9BXS6 441 aaKnown RBP12.73□□□□□ -0.37
TRAFD1-205ENST00000548277 BACH2Q9BYV9 841 aa12.73□□□□□ -0.37
TRAFD1-205ENST00000548277 ZNF518BQ9C0D4 1074 aa12.73□□□□□ -0.37
TRAFD1-205ENST00000548277 TMEM30AQ9NV96 361 aa12.73□□□□□ -0.37
TRAFD1-205ENST00000548277 LAMA1P25391 3075 aa12.73□□□□□ -0.37
TRAFD1-205ENST00000548277 USP24Q9UPU5 2620 aa12.73□□□□□ -0.37
TRAFD1-205ENST00000548277 SPAARA0A1B0GVQ0 90 aa12.72□□□□□ -0.37
TRAFD1-205ENST00000548277 FRMD3A2A2Y4 597 aa12.72□□□□□ -0.37
TRAFD1-205ENST00000548277 SLC9A3R1O14745 358 aaPredicted RBP12.72□□□□□ -0.37
TRAFD1-205ENST00000548277 CFIP05156 583 aa12.72□□□□□ -0.37
TRAFD1-205ENST00000548277 IRF1P10914 325 aa12.72□□□□□ -0.37
TRAFD1-205ENST00000548277 CEACAM1P13688 526 aa12.72□□□□□ -0.37
TRAFD1-205ENST00000548277 ENGP17813 658 aa12.72□□□□□ -0.37
TRAFD1-205ENST00000548277 ITPKAP23677 461 aa12.72□□□□□ -0.37
TRAFD1-205ENST00000548277 YWHAQP27348 245 aa12.72□□□□□ -0.37
TRAFD1-205ENST00000548277 HOXD13P35453 343 aa12.72□□□□□ -0.37
TRAFD1-205ENST00000548277 P2RY2P41231 377 aa12.72□□□□□ -0.37
TRAFD1-205ENST00000548277 TNNC1P63316 161 aa12.72□□□□□ -0.37
TRAFD1-205ENST00000548277 SLC7A9P82251 487 aa12.72□□□□□ -0.37
TRAFD1-205ENST00000548277 EOGTQ5NDL2 527 aa12.72□□□□□ -0.37
TRAFD1-205ENST00000548277 LIMS2Q7Z4I7 341 aa12.72□□□□□ -0.37
TRAFD1-205ENST00000548277 C11orf74Q86VG3 221 aa12.72□□□□□ -0.37
TRAFD1-205ENST00000548277 WDR49Q8IV35 697 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms