RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, human

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCD1-204	ENST00000547637	ADH1C	P00326	375 aa		24.56	■■□□□ 1.52
SMARCD1-204	ENST00000547637	MBL2	P11226	248 aa	Predicted RBP	24.56	■■□□□ 1.52
SMARCD1-204	ENST00000547637	YWHAQ	P27348	245 aa		24.56	■■□□□ 1.52
SMARCD1-204	ENST00000547637	USP46	P62068	366 aa		24.56	■■□□□ 1.52
SMARCD1-204	ENST00000547637	E2F4	Q16254	413 aa		24.56	■■□□□ 1.52
SMARCD1-204	ENST00000547637	ST3GAL2	Q16842	350 aa		24.56	■■□□□ 1.52
SMARCD1-204	ENST00000547637	HSF5	Q4G112	596 aa	Predicted RBP	24.56	■■□□□ 1.52
SMARCD1-204	ENST00000547637	PREPL	Q4J6C6	727 aa	Predicted RBP	24.56	■■□□□ 1.52
SMARCD1-204	ENST00000547637	NUDT18	Q6ZVK8	323 aa		24.56	■■□□□ 1.52
SMARCD1-204	ENST00000547637	UNC13D	Q70J99	1090 aa		24.56	■■□□□ 1.52
SMARCD1-204	ENST00000547637	FILIP1	Q7Z7B0	1213 aa		24.56	■■□□□ 1.52
SMARCD1-204	ENST00000547637	NELFCD	Q8IXH7	590 aa		24.56	■■□□□ 1.52
SMARCD1-204	ENST00000547637	NUP93	Q8N1F7	819 aa		24.56	■■□□□ 1.52
SMARCD1-204	ENST00000547637	PNKP	Q96T60	521 aa		24.56	■■□□□ 1.52
SMARCD1-204	ENST00000547637	FAM13B	Q9NYF5	915 aa		24.56	■■□□□ 1.52
SMARCD1-204	ENST00000547637	NXF1	Q9UBU9	619 aa	Known RBP	24.56	■■□□□ 1.52
SMARCD1-204	ENST00000547637	EML5	Q05BV3	1969 aa		24.56	■■□□□ 1.52
SMARCD1-204	ENST00000547637	HELZ	P42694	1942 aa	Known RBP	24.55	■■□□□ 1.52
SMARCD1-204	ENST00000547637	BCLAF3	A2AJT9	711 aa	Known RBP	24.55	■■□□□ 1.52
SMARCD1-204	ENST00000547637	APOD	P05090	189 aa		24.55	■■□□□ 1.52
SMARCD1-204	ENST00000547637	OPRD1	P41143	372 aa		24.55	■■□□□ 1.52
SMARCD1-204	ENST00000547637	EIF2D	P41214	584 aa	Known RBP	24.55	■■□□□ 1.52
SMARCD1-204	ENST00000547637	AP3M2	P53677	418 aa		24.55	■■□□□ 1.52
SMARCD1-204	ENST00000547637	IFRD2	Q12894	506 aa	Predicted RBP	24.55	■■□□□ 1.52
SMARCD1-204	ENST00000547637	DAB2IP	Q5VWQ8	1189 aa		24.55	■■□□□ 1.52
SMARCD1-204	ENST00000547637	GOLGA5	Q8TBA6	731 aa		24.55	■■□□□ 1.52
SMARCD1-204	ENST00000547637	OVCA2	Q8WZ82	227 aa		24.55	■■□□□ 1.52
SMARCD1-204	ENST00000547637	EZH1	Q92800	747 aa	Predicted RBP	24.55	■■□□□ 1.52
SMARCD1-204	ENST00000547637	CNOT6L	Q96LI5	555 aa	Known RBP	24.55	■■□□□ 1.52
SMARCD1-204	ENST00000547637	LSM14B	Q9BX40	385 aa	Known RBP	24.55	■■□□□ 1.52
SMARCD1-204	ENST00000547637	RNF38	Q9H0F5	515 aa		24.55	■■□□□ 1.52
SMARCD1-204	ENST00000547637	MMP17	Q9ULZ9	603 aa		24.55	■■□□□ 1.52
SMARCD1-204	ENST00000547637	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	24.54	■■□□□ 1.52
SMARCD1-204	ENST00000547637		K7EQS6	105 aa		24.54	■■□□□ 1.52
SMARCD1-204	ENST00000547637	TM4SF5	O14894	197 aa		24.54	■■□□□ 1.52
SMARCD1-204	ENST00000547637	DCLK1	O15075	740 aa		24.54	■■□□□ 1.52
SMARCD1-204	ENST00000547637	TGFB1I1	O43294	461 aa		24.54	■■□□□ 1.52
SMARCD1-204	ENST00000547637	EXOC3	O60645	756 aa		24.54	■■□□□ 1.52
SMARCD1-204	ENST00000547637	TRIM21	P19474	475 aa	Known RBP	24.54	■■□□□ 1.52
SMARCD1-204	ENST00000547637	HOXD13	P35453	343 aa		24.54	■■□□□ 1.52
SMARCD1-204	ENST00000547637	BYSL	Q13895	437 aa	Known RBP	24.54	■■□□□ 1.52
SMARCD1-204	ENST00000547637	DHCR24	Q15392	516 aa		24.54	■■□□□ 1.52
SMARCD1-204	ENST00000547637	CRY1	Q16526	586 aa		24.54	■■□□□ 1.52
SMARCD1-204	ENST00000547637	TTC30A	Q86WT1	665 aa		24.54	■■□□□ 1.52
SMARCD1-204	ENST00000547637	B3GALNT2	Q8NCR0	500 aa		24.54	■■□□□ 1.52
SMARCD1-204	ENST00000547637	OTUB2	Q96DC9	234 aa		24.54	■■□□□ 1.52
SMARCD1-204	ENST00000547637	TNIP3	Q96KP6	325 aa		24.54	■■□□□ 1.52
SMARCD1-204	ENST00000547637	MED10	Q9BTT4	135 aa		24.54	■■□□□ 1.52
SMARCD1-204	ENST00000547637	POLM	Q9NP87	494 aa	Predicted RBP	24.54	■■□□□ 1.52
SMARCD1-204	ENST00000547637	RXFP3	Q9NSD7	469 aa		24.54	■■□□□ 1.52
SMARCD1-204	ENST00000547637	SMPD4	Q9NXE4	827 aa		24.54	■■□□□ 1.52
SMARCD1-204	ENST00000547637	PTPRD	P23468	1912 aa		24.53	■■□□□ 1.52
SMARCD1-204	ENST00000547637	PVALEF	A0A1B0GWK0	134 aa		24.53	■■□□□ 1.52
SMARCD1-204	ENST00000547637	KHNYN	O15037	678 aa	Known RBP	24.53	■■□□□ 1.52
SMARCD1-204	ENST00000547637	OLFM2	O95897	454 aa		24.53	■■□□□ 1.52
SMARCD1-204	ENST00000547637	OAS1	P00973	400 aa	Known RBP	24.53	■■□□□ 1.52
SMARCD1-204	ENST00000547637	BIRC3	Q13489	604 aa		24.53	■■□□□ 1.52
SMARCD1-204	ENST00000547637	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	24.53	■■□□□ 1.52
SMARCD1-204	ENST00000547637	BTBD8	Q5XKL5	378 aa		24.53	■■□□□ 1.52
SMARCD1-204	ENST00000547637	ANO7	Q6IWH7	933 aa		24.53	■■□□□ 1.52
SMARCD1-204	ENST00000547637	C12orf56	Q8IXR9	622 aa		24.53	■■□□□ 1.52
SMARCD1-204	ENST00000547637	SCFD1	Q8WVM8	642 aa		24.53	■■□□□ 1.52
SMARCD1-204	ENST00000547637	FBXO32	Q969P5	355 aa		24.53	■■□□□ 1.52
SMARCD1-204	ENST00000547637	EDEM2	Q9BV94	578 aa		24.53	■■□□□ 1.52
SMARCD1-204	ENST00000547637	TPSD1	Q9BZJ3	242 aa		24.53	■■□□□ 1.52
SMARCD1-204	ENST00000547637	SMOC1	Q9H4F8	434 aa		24.53	■■□□□ 1.52
SMARCD1-204	ENST00000547637	CFAP97	Q9P2B7	532 aa		24.53	■■□□□ 1.52
SMARCD1-204	ENST00000547637	E2F8	A0AVK6	867 aa		24.52	■■□□□ 1.52
SMARCD1-204	ENST00000547637	POLR2D	O15514	142 aa	Known RBP	24.52	■■□□□ 1.52
SMARCD1-204	ENST00000547637	CYP17A1	P05093	508 aa		24.52	■■□□□ 1.52
SMARCD1-204	ENST00000547637	MYL6	P60660	151 aa		24.52	■■□□□ 1.52
SMARCD1-204	ENST00000547637	ZXDB	P98169	803 aa		24.52	■■□□□ 1.52
SMARCD1-204	ENST00000547637	ZNF667	Q5HYK9	610 aa		24.52	■■□□□ 1.52
SMARCD1-204	ENST00000547637	EOGT	Q5NDL2	527 aa		24.52	■■□□□ 1.52
SMARCD1-204	ENST00000547637	HECTD3	Q5T447	861 aa		24.52	■■□□□ 1.52
SMARCD1-204	ENST00000547637	PMS2CL	Q68D20	193 aa		24.52	■■□□□ 1.52
SMARCD1-204	ENST00000547637	RASSF3	Q86WH2	238 aa		24.52	■■□□□ 1.52
SMARCD1-204	ENST00000547637	CCDC33	Q8N5R6	958 aa		24.52	■■□□□ 1.52
SMARCD1-204	ENST00000547637	SPACA7	Q96KW9	195 aa		24.52	■■□□□ 1.52
SMARCD1-204	ENST00000547637	SH3BP1	Q9Y3L3	701 aa		24.52	■■□□□ 1.52
SMARCD1-204	ENST00000547637	MAP3K13	O43283	966 aa		24.51	■■□□□ 1.51
SMARCD1-204	ENST00000547637	KAT7	O95251	611 aa		24.51	■■□□□ 1.51
SMARCD1-204	ENST00000547637	KCNK5	O95279	499 aa		24.51	■■□□□ 1.51
SMARCD1-204	ENST00000547637	P4HA1	P13674	534 aa		24.51	■■□□□ 1.51
SMARCD1-204	ENST00000547637	GRIA2	P42262	883 aa		24.51	■■□□□ 1.51
SMARCD1-204	ENST00000547637	GAD2	Q05329	585 aa		24.51	■■□□□ 1.51
SMARCD1-204	ENST00000547637	KNOP1	Q1ED39	458 aa	Known RBP	24.51	■■□□□ 1.51
SMARCD1-204	ENST00000547637	CYP2U1	Q7Z449	544 aa		24.51	■■□□□ 1.51
SMARCD1-204	ENST00000547637	B3GNT5	Q9BYG0	378 aa		24.51	■■□□□ 1.51
SMARCD1-204	ENST00000547637	ZNF518B	Q9C0D4	1074 aa		24.51	■■□□□ 1.51
SMARCD1-204	ENST00000547637	NACA2	Q9H009	215 aa		24.51	■■□□□ 1.51
SMARCD1-204	ENST00000547637	SLC39A2	Q9NP94	309 aa		24.51	■■□□□ 1.51
SMARCD1-204	ENST00000547637	ARHGEF4	Q9NR80	690 aa		24.51	■■□□□ 1.51
SMARCD1-204	ENST00000547637	COMMD8	Q9NX08	183 aa		24.51	■■□□□ 1.51
SMARCD1-204	ENST00000547637	CIZ1	Q9ULV3	898 aa	Predicted RBP	24.51	■■□□□ 1.51
SMARCD1-204	ENST00000547637	INVS	Q9Y283	1065 aa		24.51	■■□□□ 1.51
SMARCD1-204	ENST00000547637	MYO16	Q9Y6X6	1858 aa		24.51	■■□□□ 1.51
SMARCD1-204	ENST00000547637	THADA	Q6YHU6	1953 aa		24.51	■■□□□ 1.51
SMARCD1-204	ENST00000547637	EPG5	Q9HCE0	2579 aa		24.5	■■□□□ 1.51
SMARCD1-204	ENST00000547637	ABCA7	Q8IZY2	2146 aa		24.5	■■□□□ 1.51

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms