RNA–Protein interactions for RNA: ENST00000547515.1

LINC02409-201, Transcript of long intergenic non-protein coding RNA 2409, humanhuman

TSL 4 BASIC

Gene LINC02409, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02409-201ENST00000547515 TRPM5Q9NZQ8 1165 aa10.86□□□□□ -0.67
LINC02409-201ENST00000547515 FBXL21Q9UKT6 434 aa10.86□□□□□ -0.67
LINC02409-201ENST00000547515 COL4A3Q01955 1670 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 TRAV19A0A0A6YYK7 116 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 KRBA1A5PL33 1030 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 DPYSL4O14531 572 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 PAEPP09466 180 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 VDRP11473 427 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 PRKCSHP14314 528 aaPredicted RBP10.85□□□□□ -0.67
LINC02409-201ENST00000547515 SLC9A1P19634 815 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 PTMSP20962 102 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 AVPR1AP37288 418 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 PDE6CP51160 858 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 ZNF132P52740 706 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 TYRO3Q06418 890 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 EXOC3L4Q17RC7 722 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 KLHL40Q2TBA0 621 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 VWA3BQ502W6 1294 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 TCP11X2Q5H9J9 407 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 SNX30Q5VWJ9 437 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 SMYD5Q6GMV2 418 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 CAVIN1Q6NZI2 390 aaKnown RBP10.85□□□□□ -0.67
LINC02409-201ENST00000547515 TMEM270Q6UE05 265 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 RRAGAQ7L523 313 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 PIP4P2Q8N4L2 257 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 ANKRD52Q8NB46 1076 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 PDZD8Q8NEN9 1154 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 SCAMP5Q8TAC9 235 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 BPIFB1Q8TDL5 484 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 USP13Q92995 863 aaPredicted RBP10.85□□□□□ -0.67
LINC02409-201ENST00000547515 FBXO32Q969P5 355 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 FAM81BQ96LP2 452 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 LRRC3BQ96PB8 259 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 UBXN6Q9BZV1 441 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 SMG9Q9H0W8 520 aaKnown RBP10.85□□□□□ -0.67
LINC02409-201ENST00000547515 NDST4Q9H3R1 872 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 FBXO44Q9H4M3 255 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 ARHGEF3Q9NR81 526 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 KIAA1257Q9ULG3 409 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 CNTN6Q9UQ52 1028 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 PCDHB4Q9Y5E5 795 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 FANCMQ8IYD8 2048 aa10.85□□□□□ -0.67
LINC02409-201ENST00000547515 C2orf78A6NCI8 922 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 RNF225M0QZC1 329 aaPredicted RBP10.84□□□□□ -0.67
LINC02409-201ENST00000547515 ARNTLO00327 626 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 O00370 1275 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 CHADO15335 359 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 OLFM2O95897 454 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 OAS1P00973 400 aaKnown RBP10.84□□□□□ -0.67
LINC02409-201ENST00000547515 USP17L7P0C7H9 530 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 ZDHHC11BP0C7U3 371 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 CD19P15391 556 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 TCF3P15923 654 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 HDCP19113 662 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 PON1P27169 355 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 GDI1P31150 447 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 MYL5Q02045 173 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 PRKCQQ04759 706 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 IFRD2Q12894 506 aaPredicted RBP10.84□□□□□ -0.67
LINC02409-201ENST00000547515 ARHGAP29Q52LW3 1261 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 SGO2Q562F6 1265 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 HSP90AA4PQ58FG1 418 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 IER5LQ5T953 404 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 CWF19L1Q69YN2 538 aaKnown RBP10.84□□□□□ -0.67
LINC02409-201ENST00000547515 ENOSF1Q7L5Y1 443 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 GPRIN1Q7Z2K8 1008 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 TTC30AQ86WT1 665 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 GPIHBP1Q8IV16 184 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 YAF2Q8IY57 180 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 SIX5Q8N196 739 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 ARL14EPQ8N8R7 260 aaPredicted RBP10.84□□□□□ -0.67
LINC02409-201ENST00000547515 RBBP8NLQ8NC74 664 aaPredicted RBP10.84□□□□□ -0.67
LINC02409-201ENST00000547515 IRF7Q92985 503 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 SLC22A12Q96S37 553 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 BRD9Q9H8M2 597 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 TRPC7Q9HCX4 862 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 UBE2TQ9NPD8 197 aaPredicted RBP10.84□□□□□ -0.67
LINC02409-201ENST00000547515 TDP1Q9NUW8 608 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 FANCLQ9NW38 375 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 APEX2Q9UBZ4 518 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 TSPAN16Q9UKR8 245 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 CA14Q9ULX7 337 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 ARHGAP26Q9UNA1 814 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 CCL26Q9Y258 94 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 KIAA1549LQ6ZVL6 1849 aa10.84□□□□□ -0.67
LINC02409-201ENST00000547515 ZNF263O14978 683 aa10.83□□□□□ -0.68
LINC02409-201ENST00000547515 CKMP06732 381 aa10.83□□□□□ -0.68
LINC02409-201ENST00000547515 TUBP50607 506 aa10.83□□□□□ -0.68
LINC02409-201ENST00000547515 CLCN5P51795 746 aa10.83□□□□□ -0.68
LINC02409-201ENST00000547515 KIF11P52732 1056 aa10.83□□□□□ -0.68
LINC02409-201ENST00000547515 BCAT1P54687 386 aa10.83□□□□□ -0.68
LINC02409-201ENST00000547515 MFAP3P55082 362 aa10.83□□□□□ -0.68
LINC02409-201ENST00000547515 MLLT6P55198 1093 aaPredicted RBP10.83□□□□□ -0.68
LINC02409-201ENST00000547515 STARD6P59095 220 aa10.83□□□□□ -0.68
LINC02409-201ENST00000547515 SLC7A9P82251 487 aa10.83□□□□□ -0.68
LINC02409-201ENST00000547515 PLCB2Q00722 1185 aa10.83□□□□□ -0.68
LINC02409-201ENST00000547515 BST2Q10589 180 aaKnown RBP10.83□□□□□ -0.68
LINC02409-201ENST00000547515 USP4Q13107 963 aa10.83□□□□□ -0.68
LINC02409-201ENST00000547515 NCAPHQ15003 741 aa10.83□□□□□ -0.68
LINC02409-201ENST00000547515 MLF2Q15773 248 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms