RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 DENND4CQ5VZ89 1909 aa12.57□□□□□ -0.4
YBX3-217ENST00000546164 KANSL1LA0AUZ9 987 aa12.57□□□□□ -0.4
YBX3-217ENST00000546164 SHISA7A6NL88 538 aa12.57□□□□□ -0.4
YBX3-217ENST00000546164 BEST1O76090 585 aa12.57□□□□□ -0.4
YBX3-217ENST00000546164 MBD3O95983 291 aa12.57□□□□□ -0.4
YBX3-217ENST00000546164 USP17L7P0C7H9 530 aa12.57□□□□□ -0.4
YBX3-217ENST00000546164 ZDHHC11BP0C7U3 371 aa12.57□□□□□ -0.4
YBX3-217ENST00000546164 GLULP15104 373 aa12.57□□□□□ -0.4
YBX3-217ENST00000546164 YWHAQP27348 245 aa12.57□□□□□ -0.4
YBX3-217ENST00000546164 GCNT1Q02742 428 aa12.57□□□□□ -0.4
YBX3-217ENST00000546164 TAF10Q12962 218 aa12.57□□□□□ -0.4
YBX3-217ENST00000546164 SNX30Q5VWJ9 437 aa12.57□□□□□ -0.4
YBX3-217ENST00000546164 ARHGAP17Q68EM7 881 aa12.57□□□□□ -0.4
YBX3-217ENST00000546164 CLEC20AQ6ZU45 233 aa12.57□□□□□ -0.4
YBX3-217ENST00000546164 KIAA1958Q8N8K9 716 aa12.57□□□□□ -0.4
YBX3-217ENST00000546164 EHBP1Q8NDI1 1231 aa12.57□□□□□ -0.4
YBX3-217ENST00000546164 MSANTD3Q96H12 275 aa12.57□□□□□ -0.4
YBX3-217ENST00000546164 TMEM176AQ96HP8 235 aa12.57□□□□□ -0.4
YBX3-217ENST00000546164 SMG9Q9H0W8 520 aaKnown RBP12.57□□□□□ -0.4
YBX3-217ENST00000546164 THAP9Q9H5L6 903 aa12.57□□□□□ -0.4
YBX3-217ENST00000546164 ARHGAP26Q9UNA1 814 aa12.57□□□□□ -0.4
YBX3-217ENST00000546164 CCL26Q9Y258 94 aa12.57□□□□□ -0.4
YBX3-217ENST00000546164 KMT2EQ8IZD2 1858 aa12.57□□□□□ -0.4
YBX3-217ENST00000546164 C2orf78A6NCI8 922 aa12.56□□□□□ -0.4
YBX3-217ENST00000546164 HHLA1C9JL84 531 aa12.56□□□□□ -0.4
YBX3-217ENST00000546164 MAN2B1O00754 1011 aa12.56□□□□□ -0.4
YBX3-217ENST00000546164 PI15O43692 258 aa12.56□□□□□ -0.4
YBX3-217ENST00000546164 OAS1P00973 400 aaKnown RBP12.56□□□□□ -0.4
YBX3-217ENST00000546164 CKMP06732 381 aa12.56□□□□□ -0.4
YBX3-217ENST00000546164 HDCP19113 662 aa12.56□□□□□ -0.4
YBX3-217ENST00000546164 ACO1P21399 889 aaKnown RBP12.56□□□□□ -0.4
YBX3-217ENST00000546164 ADORA2BP29275 332 aa12.56□□□□□ -0.4
YBX3-217ENST00000546164 TUBP50607 506 aa12.56□□□□□ -0.4
YBX3-217ENST00000546164 MAP3K7CLP57077 242 aa12.56□□□□□ -0.4
YBX3-217ENST00000546164 SLC7A9P82251 487 aa12.56□□□□□ -0.4
YBX3-217ENST00000546164 LRMPQ12912 555 aa12.56□□□□□ -0.4
YBX3-217ENST00000546164 USP4Q13107 963 aa12.56□□□□□ -0.4
YBX3-217ENST00000546164 ZNF77Q15935 545 aa12.56□□□□□ -0.4
YBX3-217ENST00000546164 ZNF394Q53GI3 561 aa12.56□□□□□ -0.4
YBX3-217ENST00000546164 PPP1R26Q5T8A7 1209 aaPredicted RBP12.56□□□□□ -0.4
YBX3-217ENST00000546164 C1orf228Q6PIY5 440 aa12.56□□□□□ -0.4
YBX3-217ENST00000546164 TPRG1Q6ZUI0 275 aa12.56□□□□□ -0.4
YBX3-217ENST00000546164 GPIHBP1Q8IV16 184 aa12.56□□□□□ -0.4
YBX3-217ENST00000546164 CCDC105Q8IYK2 499 aa12.56□□□□□ -0.4
YBX3-217ENST00000546164 PJA1Q8NG27 643 aa12.56□□□□□ -0.4
YBX3-217ENST00000546164 SCAMP5Q8TAC9 235 aa12.56□□□□□ -0.4
YBX3-217ENST00000546164 FBXO32Q969P5 355 aa12.56□□□□□ -0.4
YBX3-217ENST00000546164 HEXIM2Q96MH2 286 aaKnown RBP12.56□□□□□ -0.4
YBX3-217ENST00000546164 SLC22A12Q96S37 553 aa12.56□□□□□ -0.4
YBX3-217ENST00000546164 NELL2Q99435 816 aa12.56□□□□□ -0.4
YBX3-217ENST00000546164 FAM83CQ9BQN1 747 aa12.56□□□□□ -0.4
YBX3-217ENST00000546164 DUSP16Q9BY84 665 aa12.56□□□□□ -0.4
YBX3-217ENST00000546164 UBXN6Q9BZV1 441 aa12.56□□□□□ -0.4
YBX3-217ENST00000546164 FBXO44Q9H4M3 255 aa12.56□□□□□ -0.4
YBX3-217ENST00000546164 TRPC7Q9HCX4 862 aa12.56□□□□□ -0.4
YBX3-217ENST00000546164 LTB4R2Q9NPC1 389 aa12.56□□□□□ -0.4
YBX3-217ENST00000546164 HEBP1Q9NRV9 189 aa12.56□□□□□ -0.4
YBX3-217ENST00000546164 THG1LQ9NWX6 298 aaKnown RBP12.56□□□□□ -0.4
YBX3-217ENST00000546164 DLGAP2Q9P1A6 1054 aa12.56□□□□□ -0.4
YBX3-217ENST00000546164 SIT1Q9Y3P8 196 aa12.56□□□□□ -0.4
YBX3-217ENST00000546164 OBSL1O75147 1896 aa12.56□□□□□ -0.4
YBX3-217ENST00000546164 COL4A2P08572 1712 aa12.55□□□□□ -0.4
YBX3-217ENST00000546164 GTPBP10A4D1E9 387 aaKnown RBP12.55□□□□□ -0.4
YBX3-217ENST00000546164 PRKCSHP14314 528 aaPredicted RBP12.55□□□□□ -0.4
YBX3-217ENST00000546164 RFX1P22670 979 aa12.55□□□□□ -0.4
YBX3-217ENST00000546164 SMYD5Q6GMV2 418 aa12.55□□□□□ -0.4
YBX3-217ENST00000546164 ZNF852Q6ZMS4 543 aa12.55□□□□□ -0.4
YBX3-217ENST00000546164 FAM114A1Q8IWE2 563 aa12.55□□□□□ -0.4
YBX3-217ENST00000546164 ZNF687Q8N1G0 1237 aa12.55□□□□□ -0.4
YBX3-217ENST00000546164 PPM1KQ8N3J5 372 aa12.55□□□□□ -0.4
YBX3-217ENST00000546164 ARL14EPQ8N8R7 260 aaPredicted RBP12.55□□□□□ -0.4
YBX3-217ENST00000546164 ANKRD52Q8NB46 1076 aa12.55□□□□□ -0.4
YBX3-217ENST00000546164 PRSS33Q8NF86 280 aa12.55□□□□□ -0.4
YBX3-217ENST00000546164 RIN3Q8TB24 985 aa12.55□□□□□ -0.4
YBX3-217ENST00000546164 CSGALNACT1Q8TDX6 532 aa12.55□□□□□ -0.4
YBX3-217ENST00000546164 JAKMIP2Q96AA8 810 aa12.55□□□□□ -0.4
YBX3-217ENST00000546164 CYP2S1Q96SQ9 504 aa12.55□□□□□ -0.4
YBX3-217ENST00000546164 FOXQ1Q9C009 403 aa12.55□□□□□ -0.4
YBX3-217ENST00000546164 INTS2Q9H0H0 1204 aaKnown RBP12.55□□□□□ -0.4
YBX3-217ENST00000546164 C8orf33Q9H7E9 229 aaPredicted RBP12.55□□□□□ -0.4
YBX3-217ENST00000546164 KIAA1257Q9ULG3 409 aa12.55□□□□□ -0.4
YBX3-217ENST00000546164 MRPS17Q9Y2R5 130 aaKnown RBP12.55□□□□□ -0.4
YBX3-217ENST00000546164 PIAS3Q9Y6X2 628 aa12.55□□□□□ -0.4
YBX3-217ENST00000546164 STK25O00506 426 aa12.54□□□□□ -0.4
YBX3-217ENST00000546164 PAEPP09466 180 aa12.54□□□□□ -0.4
YBX3-217ENST00000546164 VDRP11473 427 aa12.54□□□□□ -0.4
YBX3-217ENST00000546164 TARSP26639 723 aaKnown RBP12.54□□□□□ -0.4
YBX3-217ENST00000546164 MAGEA9P43362 315 aa12.54□□□□□ -0.4
YBX3-217ENST00000546164 KIF11P52732 1056 aa12.54□□□□□ -0.4
YBX3-217ENST00000546164 ZNF132P52740 706 aa12.54□□□□□ -0.4
YBX3-217ENST00000546164 PTPN5P54829 565 aa12.54□□□□□ -0.4
YBX3-217ENST00000546164 TCF15Q12870 199 aa12.54□□□□□ -0.4
YBX3-217ENST00000546164 IFRD2Q12894 506 aaPredicted RBP12.54□□□□□ -0.4
YBX3-217ENST00000546164 MTF1Q14872 753 aa12.54□□□□□ -0.4
YBX3-217ENST00000546164 PDGFRLQ15198 375 aa12.54□□□□□ -0.4
YBX3-217ENST00000546164 TPD52L1Q16890 204 aaPredicted RBP12.54□□□□□ -0.4
YBX3-217ENST00000546164 SGO2Q562F6 1265 aa12.54□□□□□ -0.4
YBX3-217ENST00000546164 GPRIN1Q7Z2K8 1008 aa12.54□□□□□ -0.4
YBX3-217ENST00000546164 DTWD2Q8NBA8 298 aa12.54□□□□□ -0.4
YBX3-217ENST00000546164 SH3RF2Q8TEC5 729 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms