RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 BRSK2Q8IWQ3 736 aa15.76■□□□□ 0.11
RTN3-214ENST00000545432 MINDY1Q8N5J2 469 aa15.76■□□□□ 0.11
RTN3-214ENST00000545432 FAM184AQ8NB25 1140 aa15.76■□□□□ 0.11
RTN3-214ENST00000545432 HVCN1Q96D96 273 aa15.76■□□□□ 0.11
RTN3-214ENST00000545432 CDK5RAP3Q96JB5 506 aa15.76■□□□□ 0.11
RTN3-214ENST00000545432 ZSCAN31Q96LW9 406 aaPredicted RBP15.76■□□□□ 0.11
RTN3-214ENST00000545432 TRPM5Q9NZQ8 1165 aa15.76■□□□□ 0.11
RTN3-214ENST00000545432 ITGA11Q9UKX5 1188 aa15.76■□□□□ 0.11
RTN3-214ENST00000545432 STARD13Q9Y3M8 1113 aa15.76■□□□□ 0.11
RTN3-214ENST00000545432 NBEAQ8NFP9 2946 aa15.75■□□□□ 0.11
RTN3-214ENST00000545432 FLNBO75369 2602 aaKnown RBP15.75■□□□□ 0.11
RTN3-214ENST00000545432 VWA3AA6NCI4 1184 aa15.75■□□□□ 0.11
RTN3-214ENST00000545432 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.75■□□□□ 0.11
RTN3-214ENST00000545432 ITGB3P05106 788 aa15.75■□□□□ 0.11
RTN3-214ENST00000545432 GABRG2P18507 467 aa15.75■□□□□ 0.11
RTN3-214ENST00000545432 ATXN3P54252 364 aaPredicted RBP15.75■□□□□ 0.11
RTN3-214ENST00000545432 NOP14P78316 857 aaKnown RBP15.75■□□□□ 0.11
RTN3-214ENST00000545432 ZNF33AQ06730 810 aa15.75■□□□□ 0.11
RTN3-214ENST00000545432 TRIP6Q15654 476 aaKnown RBP15.75■□□□□ 0.11
RTN3-214ENST00000545432 C4orf50Q6ZRC1 276 aa15.75■□□□□ 0.11
RTN3-214ENST00000545432 SLC41A1Q8IVJ1 513 aa15.75■□□□□ 0.11
RTN3-214ENST00000545432 SCN4BQ8IWT1 228 aa15.75■□□□□ 0.11
RTN3-214ENST00000545432 CACTINQ8WUQ7 758 aaKnown RBP15.75■□□□□ 0.11
RTN3-214ENST00000545432 HMGB4Q8WW32 186 aa15.75■□□□□ 0.11
RTN3-214ENST00000545432 OTUB2Q96DC9 234 aa15.75■□□□□ 0.11
RTN3-214ENST00000545432 ZNF419Q96HQ0 510 aaPredicted RBP15.75■□□□□ 0.11
RTN3-214ENST00000545432 C8orf48Q96LL4 319 aa15.75■□□□□ 0.11
RTN3-214ENST00000545432 IKZF4Q9H2S9 585 aa15.75■□□□□ 0.11
RTN3-214ENST00000545432 SCUBE2Q9NQ36 999 aa15.75■□□□□ 0.11
RTN3-214ENST00000545432 FSCN3Q9NQT6 498 aa15.75■□□□□ 0.11
RTN3-214ENST00000545432 KIAA1522Q9P206 1035 aaPredicted RBP15.75■□□□□ 0.11
RTN3-214ENST00000545432 MAGEC2Q9UBF1 373 aaPredicted RBP15.75■□□□□ 0.11
RTN3-214ENST00000545432 SIX4Q9UIU6 781 aa15.75■□□□□ 0.11
RTN3-214ENST00000545432 CDH9Q9ULB4 789 aa15.75■□□□□ 0.11
RTN3-214ENST00000545432 CELSR3Q9NYQ7 3312 aa15.74■□□□□ 0.11
RTN3-214ENST00000545432 URB1O60287 2271 aaKnown RBP15.74■□□□□ 0.11
RTN3-214ENST00000545432 IGHV1OR15-9A0A0B4J2B8 117 aa15.74■□□□□ 0.11
RTN3-214ENST00000545432 A0A1W2PQF6 199 aa15.74■□□□□ 0.11
RTN3-214ENST00000545432 TCRBV21S2A2A0A5A6 115 aa15.74■□□□□ 0.11
RTN3-214ENST00000545432 HCRTO43612 131 aa15.74■□□□□ 0.11
RTN3-214ENST00000545432 CBFA2T3O75081 653 aa15.74■□□□□ 0.11
RTN3-214ENST00000545432 ATP2C2O75185 946 aa15.74■□□□□ 0.11
RTN3-214ENST00000545432 CFIP05156 583 aa15.74■□□□□ 0.11
RTN3-214ENST00000545432 RESTQ13127 1097 aa15.74■□□□□ 0.11
RTN3-214ENST00000545432 MCM6Q14566 821 aa15.74■□□□□ 0.11
RTN3-214ENST00000545432 COL28A1Q2UY09 1125 aa15.74■□□□□ 0.11
RTN3-214ENST00000545432 C19orf48Q6RUI8 117 aa15.74■□□□□ 0.11
RTN3-214ENST00000545432 DENND5BQ6ZUT9 1274 aa15.74■□□□□ 0.11
RTN3-214ENST00000545432 TTC30AQ86WT1 665 aa15.74■□□□□ 0.11
RTN3-214ENST00000545432 ADGRF2Q8IZF7 708 aa15.74■□□□□ 0.11
RTN3-214ENST00000545432 KBTBD7Q8WVZ9 684 aa15.74■□□□□ 0.11
RTN3-214ENST00000545432 POMGNT1Q8WZA1 660 aa15.74■□□□□ 0.11
RTN3-214ENST00000545432 RAD54LQ92698 747 aa15.74■□□□□ 0.11
RTN3-214ENST00000545432 BBC3Q96PG8 261 aaPredicted RBP15.74■□□□□ 0.11
RTN3-214ENST00000545432 CRTAC1Q9NQ79 661 aa15.74■□□□□ 0.11
RTN3-214ENST00000545432 ARHGEF4Q9NR80 690 aa15.74■□□□□ 0.11
RTN3-214ENST00000545432 CACNA2D2Q9NY47 1150 aa15.74■□□□□ 0.11
RTN3-214ENST00000545432 EHD2Q9NZN4 543 aa15.74■□□□□ 0.11
RTN3-214ENST00000545432 TBC1D14Q9P2M4 693 aa15.74■□□□□ 0.11
RTN3-214ENST00000545432 SNX9Q9Y5X1 595 aa15.74■□□□□ 0.11
RTN3-214ENST00000545432 CPQQ9Y646 472 aa15.74■□□□□ 0.11
RTN3-214ENST00000545432 LOC400499M0QZD8 3231 aa15.74■□□□□ 0.11
RTN3-214ENST00000545432 TCHHQ07283 1943 aa15.74■□□□□ 0.11
RTN3-214ENST00000545432 HELZ2Q9BYK8 2649 aaKnown RBP15.74■□□□□ 0.11
RTN3-214ENST00000545432 ATXN2Q99700 1313 aaKnown RBP15.73■□□□□ 0.11
RTN3-214ENST00000545432 PLXNB3Q9ULL4 1909 aa15.73■□□□□ 0.11
RTN3-214ENST00000545432 E2F8A0AVK6 867 aa15.73■□□□□ 0.11
RTN3-214ENST00000545432 HOXC11O43248 304 aaPredicted RBP15.73■□□□□ 0.11
RTN3-214ENST00000545432 SH3BP5O60239 455 aa15.73■□□□□ 0.11
RTN3-214ENST00000545432 ZNF217O75362 1048 aa15.73■□□□□ 0.11
RTN3-214ENST00000545432 DKK1O94907 266 aa15.73■□□□□ 0.11
RTN3-214ENST00000545432 ADH1CP00326 375 aa15.73■□□□□ 0.11
RTN3-214ENST00000545432 LDHAP00338 332 aaKnown RBP15.73■□□□□ 0.11
RTN3-214ENST00000545432 SYPP08247 313 aa15.73■□□□□ 0.11
RTN3-214ENST00000545432 FAM163BP0C2L3 166 aa15.73■□□□□ 0.11
RTN3-214ENST00000545432 ADH5P11766 374 aa15.73■□□□□ 0.11
RTN3-214ENST00000545432 PLCG1P19174 1290 aa15.73■□□□□ 0.11
RTN3-214ENST00000545432 LMO2P25791 158 aa15.73■□□□□ 0.11
RTN3-214ENST00000545432 RBP5P82980 135 aa15.73■□□□□ 0.11
RTN3-214ENST00000545432 RPL6Q02878 288 aaKnown RBP15.73■□□□□ 0.11
RTN3-214ENST00000545432 MAPRE1Q15691 268 aaKnown RBP15.73■□□□□ 0.11
RTN3-214ENST00000545432 DDX42Q86XP3 938 aaKnown RBP eCLIP15.73■□□□□ 0.11
RTN3-214ENST00000545432 CSGALNACT2Q8N6G5 542 aa15.73■□□□□ 0.11
RTN3-214ENST00000545432 TTC16Q8NEE8 873 aa15.73■□□□□ 0.11
RTN3-214ENST00000545432 ZSWIM2Q8NEG5 633 aa15.73■□□□□ 0.11
RTN3-214ENST00000545432 COL26A1Q96A83 441 aa15.73■□□□□ 0.11
RTN3-214ENST00000545432 CALML4Q96GE6 196 aa15.73■□□□□ 0.11
RTN3-214ENST00000545432 ZFRQ96KR1 1074 aaKnown RBP15.73■□□□□ 0.11
RTN3-214ENST00000545432 GTPBP2Q9BX10 602 aaKnown RBP15.73■□□□□ 0.11
RTN3-214ENST00000545432 CCDC86Q9H6F5 360 aaKnown RBP15.73■□□□□ 0.11
RTN3-214ENST00000545432 BCCIPQ9P287 314 aaKnown RBP eCLIP15.73■□□□□ 0.11
RTN3-214ENST00000545432 HELZP42694 1942 aaKnown RBP15.72■□□□□ 0.11
RTN3-214ENST00000545432 FTH1P19P0C7X4 201 aa15.72■□□□□ 0.11
RTN3-214ENST00000545432 GARTP22102 1010 aa15.72■□□□□ 0.11
RTN3-214ENST00000545432 BDNFP23560 247 aa15.72■□□□□ 0.11
RTN3-214ENST00000545432 DDIT3P35638 169 aa15.72■□□□□ 0.11
RTN3-214ENST00000545432 TFAMQ00059 246 aaKnown RBP15.72■□□□□ 0.11
RTN3-214ENST00000545432 GAD2Q05329 585 aa15.72■□□□□ 0.11
RTN3-214ENST00000545432 LY6G5CQ5SRR4 150 aa15.72■□□□□ 0.11
RTN3-214ENST00000545432 SNX30Q5VWJ9 437 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms