RNA–Protein interactions for RNA: ENST00000545209.1

SPPL3-209, Transcript of signal peptide peptidase like 3, humanhuman

TSL 1 (best)

Gene SPPL3, Length 797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-209ENST00000545209 SND1Q7KZF4 910 aaKnown RBP eCLIP7.42□□□□□ -1.22
SPPL3-209ENST00000545209 PHLDB2Q86SQ0 1253 aa7.42□□□□□ -1.22
SPPL3-209ENST00000545209 NLRP8Q86W28 1048 aa7.42□□□□□ -1.22
SPPL3-209ENST00000545209 UNC93AQ86WB7 457 aa7.42□□□□□ -1.22
SPPL3-209ENST00000545209 SLC13A5Q86YT5 568 aaPredicted RBP7.42□□□□□ -1.22
SPPL3-209ENST00000545209 KLHDC9Q8NEP7 349 aa7.42□□□□□ -1.22
SPPL3-209ENST00000545209 RAET1EQ8TD07 263 aa7.42□□□□□ -1.22
SPPL3-209ENST00000545209 WHAMMQ8TF30 809 aa7.42□□□□□ -1.22
SPPL3-209ENST00000545209 AENQ8WTP8 325 aaKnown RBP7.42□□□□□ -1.22
SPPL3-209ENST00000545209 HDAC7Q8WUI4 952 aa7.42□□□□□ -1.22
SPPL3-209ENST00000545209 IFT81Q8WYA0 676 aa7.42□□□□□ -1.22
SPPL3-209ENST00000545209 CAVIN3Q969G5 261 aa7.42□□□□□ -1.22
SPPL3-209ENST00000545209 C18orf25Q96B23 403 aaPredicted RBP7.42□□□□□ -1.22
SPPL3-209ENST00000545209 C18orf8Q96DM3 657 aa7.42□□□□□ -1.22
SPPL3-209ENST00000545209 CCDC97Q96F63 343 aaPredicted RBP7.42□□□□□ -1.22
SPPL3-209ENST00000545209 RBM41Q96IZ5 413 aaKnown RBP7.42□□□□□ -1.22
SPPL3-209ENST00000545209 ZMAT2Q96NC0 199 aaKnown RBP7.42□□□□□ -1.22
SPPL3-209ENST00000545209 MCEEQ96PE7 176 aa7.42□□□□□ -1.22
SPPL3-209ENST00000545209 TRIM7Q9C029 511 aa7.42□□□□□ -1.22
SPPL3-209ENST00000545209 SENP6Q9GZR1 1112 aaPredicted RBP7.42□□□□□ -1.22
SPPL3-209ENST00000545209 DDX47Q9H0S4 455 aaKnown RBP7.42□□□□□ -1.22
SPPL3-209ENST00000545209 SNX25Q9H3E2 840 aa7.42□□□□□ -1.22
SPPL3-209ENST00000545209 GDF3Q9NR23 364 aa7.42□□□□□ -1.22
SPPL3-209ENST00000545209 FAM114A2Q9NRY5 505 aa7.42□□□□□ -1.22
SPPL3-209ENST00000545209 HOMER3Q9NSC5 361 aa7.42□□□□□ -1.22
SPPL3-209ENST00000545209 FAM53CQ9NYF3 392 aa7.42□□□□□ -1.22
SPPL3-209ENST00000545209 HESX1Q9UBX0 185 aa7.42□□□□□ -1.22
SPPL3-209ENST00000545209 DDX20Q9UHI6 824 aaKnown RBP7.42□□□□□ -1.22
SPPL3-209ENST00000545209 PHF24Q9UPV7 400 aa7.42□□□□□ -1.22
SPPL3-209ENST00000545209 A0A1W2PNR3 127 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 SIGLEC16A6NMB1 481 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 GOLGA8SH3BPF8 625 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 HUS1O60921 280 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 CAND2O75155 1236 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 TRPA1O75762 1119 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 SASH3O75995 380 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 GLI1P08151 1106 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 CTSHP09668 335 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 KRT3P12035 628 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 PSMA2P25787 234 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 CCND3P30281 292 aaPredicted RBP7.41□□□□□ -1.22
SPPL3-209ENST00000545209 MAP2K2P36507 400 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 THPOP40225 353 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 FNTAP49354 379 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 TAF6P49848 677 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 GSCP56915 257 aaPredicted RBP7.41□□□□□ -1.22
SPPL3-209ENST00000545209 MRPS25P82663 173 aaKnown RBP7.41□□□□□ -1.22
SPPL3-209ENST00000545209 PDCLQ13371 301 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 ORC1Q13415 861 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 ZNF268Q14587 947 aaPredicted RBP7.41□□□□□ -1.22
SPPL3-209ENST00000545209 SMC1AQ14683 1233 aaKnown RBP7.41□□□□□ -1.22
SPPL3-209ENST00000545209 PTGISQ16647 500 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 GOLGA7BQ2TAP0 167 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 PTPN20Q4JDL3 420 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 ZFYVE27Q5T4F4 411 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 CYP4A22Q5TCH4 519 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 LLGL2Q6P1M3 1020 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 FIGNL1Q6PIW4 674 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 LCLAT1Q6UWP7 414 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 DPH6Q7L8W6 267 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 ADAT2Q7Z6V5 191 aaKnown RBP7.41□□□□□ -1.22
SPPL3-209ENST00000545209 CCDC50Q8IVM0 306 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 GSPT2Q8IYD1 628 aaKnown RBP7.41□□□□□ -1.22
SPPL3-209ENST00000545209 KATNAL2Q8IYT4 538 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 GOLGA6L1Q8N7Z2 621 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 NIPA2Q8N8Q9 360 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 APPL2Q8NEU8 664 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 OR6B3Q8NGW1 331 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 EXD1Q8NHP7 514 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 CD99L2Q8TCZ2 262 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 FNIP1Q8TF40 1166 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 CASKIN2Q8WXE0 1202 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 MAGOHBQ96A72 148 aaKnown RBP7.41□□□□□ -1.22
SPPL3-209ENST00000545209 TNIP3Q96KP6 325 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 TWNKQ96RR1 684 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 RUFY1Q96T51 708 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 HINFPQ9BQA5 517 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 ZCCHC2Q9C0B9 1178 aaKnown RBP7.41□□□□□ -1.22
SPPL3-209ENST00000545209 MED4Q9NPJ6 270 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 RNF186Q9NXI6 227 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 GDAP2Q9NXN4 497 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 DDX56Q9NY93 547 aaKnown RBP7.41□□□□□ -1.22
SPPL3-209ENST00000545209 KLK14Q9P0G3 267 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 HMGXB4Q9UGU5 601 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 AMACRQ9UHK6 382 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 FEZ2Q9UHY8 353 aaPredicted RBP7.41□□□□□ -1.22
SPPL3-209ENST00000545209 ST3GAL5Q9UNP4 418 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 USTQ9Y2C2 406 aa7.41□□□□□ -1.22
SPPL3-209ENST00000545209 TCRBV5S1A1TA0A578 114 aa7.4□□□□□ -1.22
SPPL3-209ENST00000545209 GOLGA6BA6NDN3 693 aa7.4□□□□□ -1.22
SPPL3-209ENST00000545209 A8MXQ7 604 aa7.4□□□□□ -1.22
SPPL3-209ENST00000545209 KPNA7A9QM74 516 aa7.4□□□□□ -1.22
SPPL3-209ENST00000545209 PODXLO00592 558 aa7.4□□□□□ -1.22
SPPL3-209ENST00000545209 PIRO00625 290 aa7.4□□□□□ -1.22
SPPL3-209ENST00000545209 PPEF2O14830 753 aa7.4□□□□□ -1.22
SPPL3-209ENST00000545209 FSCN2O14926 492 aa7.4□□□□□ -1.22
SPPL3-209ENST00000545209 TTI1O43156 1089 aa7.4□□□□□ -1.22
SPPL3-209ENST00000545209 HSF2BPO75031 334 aa7.4□□□□□ -1.22
SPPL3-209ENST00000545209 CHRNA1P02708 482 aa7.4□□□□□ -1.22
SPPL3-209ENST00000545209 KRT1P04264 644 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms