RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 FAM186AA6NE01 2351 aa10.05□□□□□ -0.8
YBX3-215ENST00000544504 ZNF263O14978 683 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 KIF5CO60282 957 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 KRT37O76014 449 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 FGF18O76093 207 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 FAM200BP0CF97 657 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 IGFBP6P24592 240 aaPredicted RBP10.04□□□□□ -0.8
YBX3-215ENST00000544504 ACAT1P24752 427 aaKnown RBP10.04□□□□□ -0.8
YBX3-215ENST00000544504 GALCP54803 685 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 PSMC1P62191 440 aaKnown RBP10.04□□□□□ -0.8
YBX3-215ENST00000544504 GPC5P78333 572 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 DSG1Q02413 1049 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 ORC1Q13415 861 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 PSMD5Q16401 504 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 NAA35Q5VZE5 725 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 ASTLQ6HA08 431 aaPredicted RBP10.04□□□□□ -0.8
YBX3-215ENST00000544504 PDE12Q6L8Q7 609 aaKnown RBP10.04□□□□□ -0.8
YBX3-215ENST00000544504 ERICH1Q86X53 443 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 ZDHHC17Q8IUH5 632 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 SPATA2LQ8IUW3 424 aaPredicted RBP10.04□□□□□ -0.8
YBX3-215ENST00000544504 MCOLN2Q8IZK6 566 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 RNF10Q8N5U6 811 aaKnown RBP10.04□□□□□ -0.8
YBX3-215ENST00000544504 C12orf29Q8N999 325 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 KREMEN2Q8NCW0 462 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 SPPL2BQ8TCT7 592 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 SLC2A14Q8TDB8 520 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 POF1BQ8WVV4 589 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 RIN2Q8WYP3 895 aaPredicted RBP10.04□□□□□ -0.8
YBX3-215ENST00000544504 HSFY1Q96LI6 401 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 PCDHB18PQ96TA0 734 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 DUSP16Q9BY84 665 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 UBXN6Q9BZV1 441 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 ZCWPW1Q9H0M4 648 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 DPEP3Q9H4B8 488 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 TLE6Q9H808 572 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 MRPL47Q9HD33 250 aaKnown RBP10.04□□□□□ -0.8
YBX3-215ENST00000544504 PNPLA8Q9NP80 782 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 CRTAC1Q9NQ79 661 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 AVENQ9NQS1 362 aaPredicted RBP10.04□□□□□ -0.8
YBX3-215ENST00000544504 MRPL17Q9NRX2 175 aaKnown RBP10.04□□□□□ -0.8
YBX3-215ENST00000544504 FAM49BQ9NUQ9 324 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 ADAM22Q9P0K1 906 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 HCSTQ9UBK5 93 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 MTRRQ9UBK8 725 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 GTF3C4Q9UKN8 822 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 SORCS3Q9UPU3 1222 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 PCDHB5Q9Y5E4 795 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 SCINQ9Y6U3 715 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 TSC2P49815 1807 aa10.04□□□□□ -0.8
YBX3-215ENST00000544504 MYO7AQ13402 2215 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 TMCO5BA8MYB1 307 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 F8W810 466 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 XPO1O14980 1071 aaKnown RBP10.03□□□□□ -0.8
YBX3-215ENST00000544504 SART1O43290 800 aaKnown RBP10.03□□□□□ -0.8
YBX3-215ENST00000544504 SRGAP2BP0DMP2 458 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 CCDC130P13994 396 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 CPB1P15086 417 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 NPR3P17342 541 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 DESP17661 470 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 MMP8P22894 467 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 ADORA2BP29275 332 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 PBX3P40426 434 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 GPD2P43304 727 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 MAGEA11P43364 429 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 CLCN5P51795 746 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 GPR17Q13304 367 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 TCEAL1Q15170 157 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 CFAP221Q4G0U5 840 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 PKDCCQ504Y2 493 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 RTP2Q5QGT7 225 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 TPGS2Q68CL5 300 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 SLC8B1Q6J4K2 584 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 DENND1BQ6P3S1 775 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 VSTM1Q6UX27 236 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 FAM35AQ86V20 835 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 TMEM173Q86WV6 379 aaPredicted RBP10.03□□□□□ -0.8
YBX3-215ENST00000544504 PASD1Q8IV76 773 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 REXO1L1PQ8IX06 675 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 FUKQ8N0W3 1084 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 KLHL23Q8NBE8 558 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 C1orf131Q8NDD1 294 aaKnown RBP10.03□□□□□ -0.8
YBX3-215ENST00000544504 OR10T2Q8NGX3 314 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 OLIG1Q8TAK6 271 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 BCL7CQ8WUZ0 217 aaPredicted RBP10.03□□□□□ -0.8
YBX3-215ENST00000544504 CPA5Q8WXQ8 436 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 RFFLQ8WZ73 363 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 MYLPFQ96A32 169 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 ZNF653Q96CK0 615 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 RMDN1Q96DB5 314 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 C18orf8Q96DM3 657 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 PCED1BQ96HM7 432 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 PPP1R13BQ96KQ4 1090 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 CEP295NLQ96MC4 621 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 CDCA3Q99618 268 aaPredicted RBP10.03□□□□□ -0.8
YBX3-215ENST00000544504 RTP3Q9BQQ7 232 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 ZSWIM1Q9BR11 485 aa10.03□□□□□ -0.8
YBX3-215ENST00000544504 DMAP1Q9NPF5 467 aaPredicted RBP10.03□□□□□ -0.8
YBX3-215ENST00000544504 TRMT1Q9NXH9 659 aaKnown RBP10.03□□□□□ -0.8
YBX3-215ENST00000544504 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.03□□□□□ -0.8
YBX3-215ENST00000544504 FNIP2Q9P278 1114 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms