RNA–Protein interactions for RNA: ENST00000544451.2

PCMTD1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PCMTD1, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-208ENST00000544451 SREK1Q8WXA9 508 aaKnown RBP13.78□□□□□ -0.2
PCMTD1-208ENST00000544451 DDX1Q92499 740 aaKnown RBP13.78□□□□□ -0.2
PCMTD1-208ENST00000544451 MFSD14AQ96MC6 490 aa13.78□□□□□ -0.2
PCMTD1-208ENST00000544451 CGRRF1Q99675 332 aa13.78□□□□□ -0.2
PCMTD1-208ENST00000544451 PGK2P07205 417 aa13.78□□□□□ -0.2
PCMTD1-208ENST00000544451 RBL1P28749 1068 aa13.78□□□□□ -0.2
PCMTD1-208ENST00000544451 TCF7P36402 384 aaPredicted RBP13.78□□□□□ -0.2
PCMTD1-208ENST00000544451 PHKA2P46019 1235 aa13.78□□□□□ -0.2
PCMTD1-208ENST00000544451 SLC25A3Q00325 362 aa13.78□□□□□ -0.2
PCMTD1-208ENST00000544451 UBAP2LQ14157 1087 aaKnown RBP13.78□□□□□ -0.2
PCMTD1-208ENST00000544451 HIC1Q14526 733 aa13.78□□□□□ -0.2
PCMTD1-208ENST00000544451 SCARA3Q6AZY7 606 aa13.78□□□□□ -0.2
PCMTD1-208ENST00000544451 TEX2Q8IWB9 1127 aa13.78□□□□□ -0.2
PCMTD1-208ENST00000544451 RXFP2Q8WXD0 754 aa13.78□□□□□ -0.2
PCMTD1-208ENST00000544451 PGBD4Q96DM1 585 aa13.78□□□□□ -0.2
PCMTD1-208ENST00000544451 OXNAD1Q96HP4 312 aaPredicted RBP13.78□□□□□ -0.2
PCMTD1-208ENST00000544451 L3MBTL3Q96JM7 780 aaPredicted RBP13.78□□□□□ -0.2
PCMTD1-208ENST00000544451 XPNPEP1Q9NQW7 623 aa13.78□□□□□ -0.2
PCMTD1-208ENST00000544451 SLC24A2Q9UI40 661 aa13.78□□□□□ -0.2
PCMTD1-208ENST00000544451 TOP3BO95985 862 aaKnown RBP13.77□□□□□ -0.2
PCMTD1-208ENST00000544451 ATP6V1B1P15313 513 aa13.77□□□□□ -0.2
PCMTD1-208ENST00000544451 IVDP26440 423 aa13.77□□□□□ -0.2
PCMTD1-208ENST00000544451 MSX2P35548 267 aaPredicted RBP13.77□□□□□ -0.2
PCMTD1-208ENST00000544451 HADHBP55084 474 aaKnown RBP13.77□□□□□ -0.2
PCMTD1-208ENST00000544451 OGDHQ02218 1023 aa13.77□□□□□ -0.2
PCMTD1-208ENST00000544451 NME3Q13232 169 aa13.77□□□□□ -0.2
PCMTD1-208ENST00000544451 PEX6Q13608 980 aa13.77□□□□□ -0.2
PCMTD1-208ENST00000544451 LY6KQ17RY6 165 aa13.77□□□□□ -0.2
PCMTD1-208ENST00000544451 HEATR6Q6AI08 1181 aaKnown RBP13.77□□□□□ -0.2
PCMTD1-208ENST00000544451 DENND5BQ6ZUT9 1274 aa13.77□□□□□ -0.2
PCMTD1-208ENST00000544451 C12orf50Q8NA57 414 aaPredicted RBP13.77□□□□□ -0.2
PCMTD1-208ENST00000544451 TFAP2BQ92481 460 aa13.77□□□□□ -0.2
PCMTD1-208ENST00000544451 APOL2Q9BQE5 337 aa13.77□□□□□ -0.2
PCMTD1-208ENST00000544451 MYOZ2Q9NPC6 264 aa13.77□□□□□ -0.2
PCMTD1-208ENST00000544451 TCRBV9S1A1TA0A576 114 aa13.77□□□□□ -0.21
PCMTD1-208ENST00000544451 VWA5AO00534 786 aa13.77□□□□□ -0.21
PCMTD1-208ENST00000544451 COG7P83436 770 aa13.77□□□□□ -0.21
PCMTD1-208ENST00000544451 BST1Q10588 318 aa13.77□□□□□ -0.21
PCMTD1-208ENST00000544451 NFIL3Q16649 462 aa13.77□□□□□ -0.21
PCMTD1-208ENST00000544451 SCUBE1Q8IWY4 988 aa13.77□□□□□ -0.21
PCMTD1-208ENST00000544451 SCUBE3Q8IX30 993 aa13.77□□□□□ -0.21
PCMTD1-208ENST00000544451 CPT1BQ92523 772 aa13.77□□□□□ -0.21
PCMTD1-208ENST00000544451 LPAR1Q92633 364 aa13.77□□□□□ -0.21
PCMTD1-208ENST00000544451 PTPRN2Q92932 1015 aa13.77□□□□□ -0.21
PCMTD1-208ENST00000544451 TUBB6Q9BUF5 446 aa13.77□□□□□ -0.21
PCMTD1-208ENST00000544451 TEX13BQ9BXU2 312 aa13.77□□□□□ -0.21
PCMTD1-208ENST00000544451 EBF2Q9HAK2 575 aa13.77□□□□□ -0.21
PCMTD1-208ENST00000544451 SLC5A4Q9NY91 659 aa13.77□□□□□ -0.21
PCMTD1-208ENST00000544451 NENFQ9UMX5 172 aa13.77□□□□□ -0.21
PCMTD1-208ENST00000544451 C2CD2Q9Y426 696 aa13.77□□□□□ -0.21
PCMTD1-208ENST00000544451 TMEM191CA6NGB0 347 aa13.77□□□□□ -0.21
PCMTD1-208ENST00000544451 NDC80O14777 642 aa13.77□□□□□ -0.21
PCMTD1-208ENST00000544451 APOL1O14791 398 aa13.77□□□□□ -0.21
PCMTD1-208ENST00000544451 LYPLA1O75608 230 aaPredicted RBP13.77□□□□□ -0.21
PCMTD1-208ENST00000544451 TPBGLP0DKB5 382 aa13.77□□□□□ -0.21
PCMTD1-208ENST00000544451 DPYSL3Q14195 570 aa13.77□□□□□ -0.21
PCMTD1-208ENST00000544451 CGB2Q6NT52 195 aa13.77□□□□□ -0.21
PCMTD1-208ENST00000544451 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.77□□□□□ -0.21
PCMTD1-208ENST00000544451 GSDMBQ8TAX9 411 aa13.77□□□□□ -0.21
PCMTD1-208ENST00000544451 CLEC4DQ8WXI8 215 aa13.77□□□□□ -0.21
PCMTD1-208ENST00000544451 CPB2Q96IY4 423 aa13.77□□□□□ -0.21
PCMTD1-208ENST00000544451 FOXP3Q9BZS1 431 aa13.77□□□□□ -0.21
PCMTD1-208ENST00000544451 ZNF408Q9H9D4 720 aa13.77□□□□□ -0.21
PCMTD1-208ENST00000544451 DNAJC16Q9Y2G8 782 aa13.77□□□□□ -0.21
PCMTD1-208ENST00000544451 NAV1Q8NEY1 1877 aa13.77□□□□□ -0.21
PCMTD1-208ENST00000544451 ZNF541Q9H0D2 1346 aa13.76□□□□□ -0.21
PCMTD1-208ENST00000544451 LRP5O75197 1615 aa13.76□□□□□ -0.21
PCMTD1-208ENST00000544451 ALOX15BO15296 676 aa13.76□□□□□ -0.21
PCMTD1-208ENST00000544451 B4GALT5O43286 388 aa13.76□□□□□ -0.21
PCMTD1-208ENST00000544451 PEX11AO75192 247 aa13.76□□□□□ -0.21
PCMTD1-208ENST00000544451 TMEM63AO94886 807 aa13.76□□□□□ -0.21
PCMTD1-208ENST00000544451 SUPT20HL2P0C7V6 817 aa13.76□□□□□ -0.21
PCMTD1-208ENST00000544451 MMP8P22894 467 aa13.76□□□□□ -0.21
PCMTD1-208ENST00000544451 KDELR1P24390 212 aa13.76□□□□□ -0.21
PCMTD1-208ENST00000544451 IRX1P78414 480 aaPredicted RBP13.76□□□□□ -0.21
PCMTD1-208ENST00000544451 CXCL9Q07325 125 aa13.76□□□□□ -0.21
PCMTD1-208ENST00000544451 SUPT20HL1Q3ZLR7 823 aa13.76□□□□□ -0.21
PCMTD1-208ENST00000544451 PTPN20Q4JDL3 420 aa13.76□□□□□ -0.21
PCMTD1-208ENST00000544451 DCAF15Q66K64 600 aa13.76□□□□□ -0.21
PCMTD1-208ENST00000544451 GALNT4Q8N4A0 578 aa13.76□□□□□ -0.21
PCMTD1-208ENST00000544451 CCNYL1Q8N7R7 359 aa13.76□□□□□ -0.21
PCMTD1-208ENST00000544451 CADM1Q9BY67 442 aaKnown RBP13.76□□□□□ -0.21
PCMTD1-208ENST00000544451 LRMDAQ9H2I8 198 aa13.76□□□□□ -0.21
PCMTD1-208ENST00000544451 A0A0B4J269 797 aa13.76□□□□□ -0.21
PCMTD1-208ENST00000544451 E9PBE3 544 aa13.76□□□□□ -0.21
PCMTD1-208ENST00000544451 GOLGA8TH3BQL2 631 aa13.76□□□□□ -0.21
PCMTD1-208ENST00000544451 UGT1A9O60656 530 aa13.76□□□□□ -0.21
PCMTD1-208ENST00000544451 KLHL41O60662 606 aa13.76□□□□□ -0.21
PCMTD1-208ENST00000544451 ZC3H11AO75152 810 aaKnown RBP eCLIP13.76□□□□□ -0.213e-8■■■■■ 28.3
PCMTD1-208ENST00000544451 USP12O75317 370 aa13.76□□□□□ -0.21
PCMTD1-208ENST00000544451 VNN1O95497 513 aa13.76□□□□□ -0.21
PCMTD1-208ENST00000544451 MMP14P50281 582 aa13.76□□□□□ -0.21
PCMTD1-208ENST00000544451 EN1Q05925 392 aaPredicted RBP13.76□□□□□ -0.21
PCMTD1-208ENST00000544451 SLC45A4Q5BKX6 768 aa13.76□□□□□ -0.21
PCMTD1-208ENST00000544451 ZC3H12AQ5D1E8 599 aaKnown RBP13.76□□□□□ -0.21
PCMTD1-208ENST00000544451 RINLQ6ZS11 566 aa13.76□□□□□ -0.21
PCMTD1-208ENST00000544451 ACOT1Q86TX2 421 aa13.76□□□□□ -0.21
PCMTD1-208ENST00000544451 TRIM42Q8IWZ5 723 aa13.76□□□□□ -0.21
PCMTD1-208ENST00000544451 MCUQ8NE86 351 aa13.76□□□□□ -0.21
PCMTD1-208ENST00000544451 ASCC2Q9H1I8 757 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms