RNA–Protein interactions for RNA: ENST00000543794.5

LPCAT3-211, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-211ENST00000543794 SCNM1Q9BWG6 230 aa21.3■■□□□ 1
LPCAT3-211ENST00000543794 POLMQ9NP87 494 aaPredicted RBP21.3■■□□□ 1
LPCAT3-211ENST00000543794 TMEM74BQ9NUR3 256 aa21.3■■□□□ 1
LPCAT3-211ENST00000543794 FBXO2Q9UK22 296 aaPredicted RBP21.3■■□□□ 1
LPCAT3-211ENST00000543794 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.3■■□□□ 1
LPCAT3-211ENST00000543794 SRPRBQ9Y5M8 271 aaKnown RBP21.3■■□□□ 1
LPCAT3-211ENST00000543794 CPQQ9Y646 472 aa21.3■■□□□ 1
LPCAT3-211ENST00000543794 MYO16Q9Y6X6 1858 aa21.3■■□□□ 1
LPCAT3-211ENST00000543794 THADAQ6YHU6 1953 aa21.3■■□□□ 1
LPCAT3-211ENST00000543794 PTPRJQ12913 1337 aa21.29■■□□□ 1
LPCAT3-211ENST00000543794 TRIM66O15016 1216 aa21.29■■□□□ 1
LPCAT3-211ENST00000543794 PRPF6O94906 941 aaKnown RBP21.29■■□□□ 1
LPCAT3-211ENST00000543794 KAT7O95251 611 aa21.29■■□□□ 1
LPCAT3-211ENST00000543794 KLF8O95600 359 aaPredicted RBP21.29■■□□□ 1
LPCAT3-211ENST00000543794 APODP05090 189 aa21.29■■□□□ 1
LPCAT3-211ENST00000543794 IDEP14735 1019 aa21.29■■□□□ 1
LPCAT3-211ENST00000543794 TIE1P35590 1138 aa21.29■■□□□ 1
LPCAT3-211ENST00000543794 KIR2DL1P43626 348 aaPredicted RBP21.29■■□□□ 1
LPCAT3-211ENST00000543794 SURF1Q15526 300 aa21.29■■□□□ 1
LPCAT3-211ENST00000543794 MAP7D1Q3KQU3 841 aa21.29■■□□□ 1
LPCAT3-211ENST00000543794 SPDYCQ5MJ68 293 aa21.29■■□□□ 1
LPCAT3-211ENST00000543794 EOGTQ5NDL2 527 aa21.29■■□□□ 1
LPCAT3-211ENST00000543794 EMC10Q5UCC4 262 aa21.29■■□□□ 1
LPCAT3-211ENST00000543794 FRMD1Q8N878 549 aa21.29■■□□□ 1
LPCAT3-211ENST00000543794 SPACA7Q96KW9 195 aa21.29■■□□□ 1
LPCAT3-211ENST00000543794 NUSAP1Q9BXS6 441 aaKnown RBP21.29■■□□□ 1
LPCAT3-211ENST00000543794 MBD1Q9UIS9 605 aaPredicted RBP21.29■■□□□ 1
LPCAT3-211ENST00000543794 KIAA1549LQ6ZVL6 1849 aa21.29■■□□□ 1
LPCAT3-211ENST00000543794 WDFY3Q8IZQ1 3526 aa21.28■■□□□ 1
LPCAT3-211ENST00000543794 IGF2RP11717 2491 aa21.28■■□□□ 1
LPCAT3-211ENST00000543794 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.28■■□□□ 1
LPCAT3-211ENST00000543794 ZNF233A6NK53 670 aa21.28■■□□□ 1
LPCAT3-211ENST00000543794 F8VP50 259 aa21.28■■□□□ 1
LPCAT3-211ENST00000543794 MAP3K13O43283 966 aa21.28■■□□□ 1
LPCAT3-211ENST00000543794 OAS1P00973 400 aaKnown RBP21.28■■□□□ 1
LPCAT3-211ENST00000543794 TNNC2P02585 160 aa21.28■■□□□ 1
LPCAT3-211ENST00000543794 GRIA2P42262 883 aa21.28■■□□□ 1
LPCAT3-211ENST00000543794 PTGER3P43115 390 aa21.28■■□□□ 1
LPCAT3-211ENST00000543794 TNFRSF4P43489 277 aa21.28■■□□□ 1
LPCAT3-211ENST00000543794 TAF10Q12962 218 aa21.28■■□□□ 1
LPCAT3-211ENST00000543794 C12orf40Q86WS4 652 aa21.28■■□□□ 1
LPCAT3-211ENST00000543794 TMEFF1Q8IYR6 380 aa21.28■■□□□ 1
LPCAT3-211ENST00000543794 CLIC6Q96NY7 704 aa21.28■■□□□ 1
LPCAT3-211ENST00000543794 PANK4Q9NVE7 773 aa21.28■■□□□ 1
LPCAT3-211ENST00000543794 SMPD4Q9NXE4 827 aa21.28■■□□□ 1
LPCAT3-211ENST00000543794 NME7Q9Y5B8 376 aa21.28■■□□□ 1
LPCAT3-211ENST00000543794 GON4LQ3T8J9 2241 aa21.28■■□□□ 1
LPCAT3-211ENST00000543794 ASCC3Q8N3C0 2202 aaKnown RBP21.28■■□□□ 1
LPCAT3-211ENST00000543794 ATRXP46100 2492 aa21.27■■□□□ 1
LPCAT3-211ENST00000543794 ADAM23O75077 832 aa21.27■■□□□ 1
LPCAT3-211ENST00000543794 ABL1P00519 1130 aa21.27■■□□□ 1
LPCAT3-211ENST00000543794 FAM163BP0C2L3 166 aa21.27■■□□□ 1
LPCAT3-211ENST00000543794 GNL1P36915 607 aaPredicted RBP21.27■■□□□ 1
LPCAT3-211ENST00000543794 TXLNAP40222 546 aa21.27■■□□□ 1
LPCAT3-211ENST00000543794 DPP6P42658 865 aa21.27■■□□□ 1
LPCAT3-211ENST00000543794 RESTQ13127 1097 aa21.27■■□□□ 1
LPCAT3-211ENST00000543794 BYSLQ13895 437 aaKnown RBP21.27■■□□□ 1
LPCAT3-211ENST00000543794 TDRD10Q5VZ19 366 aaKnown RBP21.27■■□□□ 1
LPCAT3-211ENST00000543794 SLC23A3Q6PIS1 610 aa21.27■■□□□ 1
LPCAT3-211ENST00000543794 CCDC73Q6ZRK6 1079 aa21.27■■□□□ 1
LPCAT3-211ENST00000543794 CBWD2Q8IUF1 395 aa21.27■■□□□ 1
LPCAT3-211ENST00000543794 MMS19Q96T76 1030 aa21.27■■□□□ 1
LPCAT3-211ENST00000543794 MRPL45Q9BRJ2 306 aaKnown RBP21.27■■□□□ 1
LPCAT3-211ENST00000543794 SLC32A1Q9H598 525 aa21.27■■□□□ 1
LPCAT3-211ENST00000543794 ARHGEF4Q9NR80 690 aa21.27■■□□□ 1
LPCAT3-211ENST00000543794 CFAP97Q9P2B7 532 aa21.27■■□□□ 1
LPCAT3-211ENST00000543794 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.26■□□□□ 0.99
LPCAT3-211ENST00000543794 SCAMP3O14828 347 aaKnown RBP21.26■□□□□ 0.99
LPCAT3-211ENST00000543794 TACC1O75410 805 aa21.26■□□□□ 0.99
LPCAT3-211ENST00000543794 ADH1CP00326 375 aa21.26■□□□□ 0.99
LPCAT3-211ENST00000543794 ENGP17813 658 aa21.26■□□□□ 0.99
LPCAT3-211ENST00000543794 MDH1BQ5I0G3 518 aa21.26■□□□□ 0.99
LPCAT3-211ENST00000543794 PEAR1Q5VY43 1037 aaPredicted RBP21.26■□□□□ 0.99
LPCAT3-211ENST00000543794 ARMCX6Q7L4S7 300 aa21.26■□□□□ 0.99
LPCAT3-211ENST00000543794 TRAPPC11Q7Z392 1133 aa21.26■□□□□ 0.99
LPCAT3-211ENST00000543794 DDX42Q86XP3 938 aaKnown RBP eCLIP21.26■□□□□ 0.99
LPCAT3-211ENST00000543794 WDR49Q8IV35 697 aa21.26■□□□□ 0.99
LPCAT3-211ENST00000543794 SLITRK1Q96PX8 696 aa21.26■□□□□ 0.99
LPCAT3-211ENST00000543794 BCCIPQ9P287 314 aaKnown RBP eCLIP21.26■□□□□ 0.99
LPCAT3-211ENST00000543794 TBC1D14Q9P2M4 693 aa21.26■□□□□ 0.99
LPCAT3-211ENST00000543794 PILRBQ9UKJ0 227 aa21.26■□□□□ 0.99
LPCAT3-211ENST00000543794 CIZ1Q9ULV3 898 aaPredicted RBP21.26■□□□□ 0.99
LPCAT3-211ENST00000543794 PCNX2A6NKB5 2137 aa21.26■□□□□ 0.99
LPCAT3-211ENST00000543794 SRRM3A6NNA2 597 aaPredicted RBP21.25■□□□□ 0.99
LPCAT3-211ENST00000543794 UPK3BL1B0FP48 263 aa21.25■□□□□ 0.99
LPCAT3-211ENST00000543794 UPK3BL2E5RIL1 263 aa21.25■□□□□ 0.99
LPCAT3-211ENST00000543794 CST3P01034 146 aaPredicted RBP21.25■□□□□ 0.99
LPCAT3-211ENST00000543794 ADH5P11766 374 aa21.25■□□□□ 0.99
LPCAT3-211ENST00000543794 MAPK8P45983 427 aa21.25■□□□□ 0.99
LPCAT3-211ENST00000543794 HS2ST1Q7LGA3 356 aa21.25■□□□□ 0.99
LPCAT3-211ENST00000543794 PIP4P1Q86T03 277 aa21.25■□□□□ 0.99
LPCAT3-211ENST00000543794 PHTF2Q8N3S3 785 aa21.25■□□□□ 0.99
LPCAT3-211ENST00000543794 KCNV2Q8TDN2 545 aa21.25■□□□□ 0.99
LPCAT3-211ENST00000543794 HMGB4Q8WW32 186 aa21.25■□□□□ 0.99
LPCAT3-211ENST00000543794 SNX25Q9H3E2 840 aa21.25■□□□□ 0.99
LPCAT3-211ENST00000543794 TMEM30AQ9NV96 361 aa21.25■□□□□ 0.99
LPCAT3-211ENST00000543794 NEUROG3Q9Y4Z2 214 aa21.25■□□□□ 0.99
LPCAT3-211ENST00000543794 PTPRDP23468 1912 aa21.24■□□□□ 0.99
LPCAT3-211ENST00000543794 E2F8A0AVK6 867 aa21.24■□□□□ 0.99
LPCAT3-211ENST00000543794 MBL2P11226 248 aaPredicted RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms