RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 SLC20A2Q08357 652 aa14.56□□□□□ -0.08
MSH2-206ENST00000543555 PDIA2Q13087 525 aaKnown RBP14.56□□□□□ -0.08
MSH2-206ENST00000543555 TMED2Q15363 201 aa14.56□□□□□ -0.08
MSH2-206ENST00000543555 C15orf59Q2T9L4 293 aaPredicted RBP14.56□□□□□ -0.08
MSH2-206ENST00000543555 PPP1R26Q5T8A7 1209 aaPredicted RBP14.56□□□□□ -0.08
MSH2-206ENST00000543555 TDRPQ86YL5 185 aa14.56□□□□□ -0.08
MSH2-206ENST00000543555 CPT1BQ92523 772 aa14.56□□□□□ -0.08
MSH2-206ENST00000543555 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.56□□□□□ -0.08
MSH2-206ENST00000543555 SAMD15Q9P1V8 674 aa14.56□□□□□ -0.08
MSH2-206ENST00000543555 CITO14578 2027 aa14.56□□□□□ -0.08
MSH2-206ENST00000543555 GOLGA6L7A0A1B0GV03 622 aa14.56□□□□□ -0.08
MSH2-206ENST00000543555 GPR32O75388 356 aa14.56□□□□□ -0.08
MSH2-206ENST00000543555 CYP2B6P20813 491 aa14.56□□□□□ -0.08
MSH2-206ENST00000543555 VEGFBP49765 207 aa14.56□□□□□ -0.08
MSH2-206ENST00000543555 RGS7P49802 495 aa14.56□□□□□ -0.08
MSH2-206ENST00000543555 ITIH4Q14624 930 aa14.56□□□□□ -0.08
MSH2-206ENST00000543555 ZBTB6Q15916 424 aa14.56□□□□□ -0.08
MSH2-206ENST00000543555 HIF1AQ16665 826 aa14.56□□□□□ -0.08
MSH2-206ENST00000543555 FAM110CQ1W6H9 321 aa14.56□□□□□ -0.08
MSH2-206ENST00000543555 ACOT1Q86TX2 421 aa14.56□□□□□ -0.08
MSH2-206ENST00000543555 UNC45BQ8IWX7 931 aa14.56□□□□□ -0.08
MSH2-206ENST00000543555 EIF2AQ9BY44 585 aaKnown RBP14.56□□□□□ -0.08
MSH2-206ENST00000543555 PHACTR1Q9C0D0 580 aa14.56□□□□□ -0.08
MSH2-206ENST00000543555 CDHR5Q9HBB8 845 aa14.56□□□□□ -0.08
MSH2-206ENST00000543555 TUBGCP4Q9UGJ1 667 aa14.56□□□□□ -0.08
MSH2-206ENST00000543555 GOLGA8MH3BSY2 632 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 MCF2LO15068 1137 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 CDH6P55285 790 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 CDC42EP1Q00587 391 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 ACTN3Q08043 901 aaPredicted RBP14.55□□□□□ -0.08
MSH2-206ENST00000543555 MMRN1Q13201 1228 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 PKDCCQ504Y2 493 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 RAB6CQ53S08 254 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 ANKRD22Q5VYY1 191 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 NOTUMQ6P988 496 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 TTC30AQ86WT1 665 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 ANKS4BQ8N8V4 417 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 NAT8LQ8N9F0 302 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 PPP1R13LQ8WUF5 828 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 P3H4Q92791 437 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 ELAC2Q9BQ52 826 aaKnown RBP14.55□□□□□ -0.08
MSH2-206ENST00000543555 RAB6CQ9H0N0 254 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 VPS37BQ9H9H4 285 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 MLXIPLQ9NP71 852 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 NME7Q9Y5B8 376 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 RASA4BC9J798 803 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 RASA4O43374 803 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 GRAP2O75791 330 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 SMIM10L2AP0DMW4 78 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 SMIM10L2BP0DMW5 78 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 RBP3P10745 1247 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 RDXP35241 583 aaKnown RBP14.55□□□□□ -0.08
MSH2-206ENST00000543555 YARSP54577 528 aaKnown RBP14.55□□□□□ -0.08
MSH2-206ENST00000543555 NR1H3Q13133 447 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 CDO1Q16878 200 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 PMF1Q6P1K2 205 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 TAX1BP1Q86VP1 789 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 LRRC52Q8N7C0 313 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 BEST2Q8NFU1 509 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 SPATA18Q8TC71 538 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 CKAP2Q8WWK9 683 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 KAT2BQ92831 832 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 OSMRQ99650 979 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 ACTR5Q9H9F9 607 aaPredicted RBP14.55□□□□□ -0.08
MSH2-206ENST00000543555 HES2Q9Y543 173 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 PRPSAP2O60256 369 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 SETSIPP0DME0 302 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 GAD2Q05329 585 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 CCL14Q16627 93 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 RALGAPA2Q2PPJ7 1873 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 ANKRD20A8PQ5CZ79 823 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 OLFML1Q6UWY5 402 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 FAM71DQ8N9W8 422 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 CCT6BQ92526 530 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 C18orf25Q96B23 403 aaPredicted RBP14.55□□□□□ -0.08
MSH2-206ENST00000543555 MAK16Q9BXY0 300 aaKnown RBP14.55□□□□□ -0.08
MSH2-206ENST00000543555 SLC4A5Q9BY07 1137 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 FAM49BQ9NUQ9 324 aa14.55□□□□□ -0.08
MSH2-206ENST00000543555 LAMA2P24043 3122 aaKnown RBP14.55□□□□□ -0.08
MSH2-206ENST00000543555 NRCAMQ92823 1304 aa14.54□□□□□ -0.08
MSH2-206ENST00000543555 A6NJR5 290 aa14.54□□□□□ -0.08
MSH2-206ENST00000543555 TCP11X1B4DZS4 312 aa14.54□□□□□ -0.08
MSH2-206ENST00000543555 POC1B-GALNT4F8VUJ3 575 aa14.54□□□□□ -0.08
MSH2-206ENST00000543555 DPYSL4O14531 572 aa14.54□□□□□ -0.08
MSH2-206ENST00000543555 DYNC1LI2O43237 492 aaPredicted RBP14.54□□□□□ -0.08
MSH2-206ENST00000543555 BANF1O75531 89 aa14.54□□□□□ -0.08
MSH2-206ENST00000543555 F2P00734 622 aa14.54□□□□□ -0.08
MSH2-206ENST00000543555 ARL4CP56559 192 aa14.54□□□□□ -0.08
MSH2-206ENST00000543555 DPYSL3Q14195 570 aa14.54□□□□□ -0.08
MSH2-206ENST00000543555 NOMO1Q15155 1222 aa14.54□□□□□ -0.08
MSH2-206ENST00000543555 SPRED3Q2MJR0 410 aa14.54□□□□□ -0.08
MSH2-206ENST00000543555 CCDC14Q49A88 953 aa14.54□□□□□ -0.08
MSH2-206ENST00000543555 CAPN12Q6ZSI9 719 aa14.54□□□□□ -0.08
MSH2-206ENST00000543555 ARHGEF18Q6ZSZ5 1173 aa14.54□□□□□ -0.08
MSH2-206ENST00000543555 TRABD2AQ86V40 505 aa14.54□□□□□ -0.08
MSH2-206ENST00000543555 NKIRAS1Q9NYS0 192 aa14.54□□□□□ -0.08
MSH2-206ENST00000543555 SMIM35A0A1B0GVV1 85 aa14.54□□□□□ -0.08
MSH2-206ENST00000543555 SLC15A5A6NIM6 579 aa14.54□□□□□ -0.08
MSH2-206ENST00000543555 DARSP14868 501 aaKnown RBP14.54□□□□□ -0.08
MSH2-206ENST00000543555 TFDP2Q14188 446 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms