RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 KIAA0895Q8NCT3 520 aa13.95□□□□□ -0.18
RTN3-213ENST00000543552 TMC2Q8TDI7 906 aa13.95□□□□□ -0.18
RTN3-213ENST00000543552 GAB3Q8WWW8 586 aa13.95□□□□□ -0.18
RTN3-213ENST00000543552 ZNF516Q92618 1163 aa13.95□□□□□ -0.18
RTN3-213ENST00000543552 CHFRQ96EP1 664 aa13.95□□□□□ -0.18
RTN3-213ENST00000543552 SMARCD1Q96GM5 515 aa13.95□□□□□ -0.18
RTN3-213ENST00000543552 MED10Q9BTT4 135 aa13.95□□□□□ -0.18
RTN3-213ENST00000543552 IMPG2Q9BZV3 1241 aa13.95□□□□□ -0.18
RTN3-213ENST00000543552 ZNF518BQ9C0D4 1074 aa13.95□□□□□ -0.18
RTN3-213ENST00000543552 GZF1Q9H116 711 aaPredicted RBP13.95□□□□□ -0.18
RTN3-213ENST00000543552 DPEP3Q9H4B8 488 aa13.95□□□□□ -0.18
RTN3-213ENST00000543552 SMYD3Q9H7B4 428 aa13.95□□□□□ -0.18
RTN3-213ENST00000543552 DMAP1Q9NPF5 467 aaPredicted RBP13.95□□□□□ -0.18
RTN3-213ENST00000543552 DMAC2Q9NW81 257 aa13.95□□□□□ -0.18
RTN3-213ENST00000543552 ANAPC1Q9H1A4 1944 aa13.95□□□□□ -0.18
RTN3-213ENST00000543552 A0A1B0GVL5 298 aa13.94□□□□□ -0.18
RTN3-213ENST00000543552 LEFTY2O00292 366 aa13.94□□□□□ -0.18
RTN3-213ENST00000543552 IKBKBO14920 756 aa13.94□□□□□ -0.18
RTN3-213ENST00000543552 OLFM2O95897 454 aa13.94□□□□□ -0.18
RTN3-213ENST00000543552 CCDC192P0DO97 292 aa13.94□□□□□ -0.18
RTN3-213ENST00000543552 YWHAQP27348 245 aa13.94□□□□□ -0.18
RTN3-213ENST00000543552 TAF10Q12962 218 aa13.94□□□□□ -0.18
RTN3-213ENST00000543552 CSRP2Q16527 193 aa13.94□□□□□ -0.18
RTN3-213ENST00000543552 SCARA5Q6ZMJ2 495 aa13.94□□□□□ -0.18
RTN3-213ENST00000543552 SYT13Q7L8C5 426 aa13.94□□□□□ -0.18
RTN3-213ENST00000543552 CACNA2D4Q7Z3S7 1137 aa13.94□□□□□ -0.18
RTN3-213ENST00000543552 FAM35AQ86V20 835 aa13.94□□□□□ -0.18
RTN3-213ENST00000543552 FAM160A2Q8N612 972 aaPredicted RBP13.94□□□□□ -0.18
RTN3-213ENST00000543552 NETO1Q8TDF5 533 aa13.94□□□□□ -0.18
RTN3-213ENST00000543552 LOXL4Q96JB6 756 aa13.94□□□□□ -0.18
RTN3-213ENST00000543552 RTKNQ9BST9 563 aa13.94□□□□□ -0.18
RTN3-213ENST00000543552 B3GNT5Q9BYG0 378 aa13.94□□□□□ -0.18
RTN3-213ENST00000543552 SCAND2PQ9GZW5 306 aaPredicted RBP13.94□□□□□ -0.18
RTN3-213ENST00000543552 KCTD10Q9H3F6 313 aa13.94□□□□□ -0.18
RTN3-213ENST00000543552 SEMA4GQ9NTN9 838 aa13.94□□□□□ -0.18
RTN3-213ENST00000543552 C2orf42Q9NWW7 574 aa13.94□□□□□ -0.18
RTN3-213ENST00000543552 COMMD8Q9NX08 183 aa13.94□□□□□ -0.18
RTN3-213ENST00000543552 HPSEQ9Y251 543 aa13.94□□□□□ -0.18
RTN3-213ENST00000543552 CPQQ9Y646 472 aa13.94□□□□□ -0.18
RTN3-213ENST00000543552 MAPK13O15264 365 aa13.93□□□□□ -0.18
RTN3-213ENST00000543552 APBB3O95704 486 aa13.93□□□□□ -0.18
RTN3-213ENST00000543552 ADH1CP00326 375 aa13.93□□□□□ -0.18
RTN3-213ENST00000543552 OAS1P00973 400 aaKnown RBP13.93□□□□□ -0.18
RTN3-213ENST00000543552 C4BPAP04003 597 aaKnown RBP13.93□□□□□ -0.18
RTN3-213ENST00000543552 TGM1P22735 817 aa13.93□□□□□ -0.18
RTN3-213ENST00000543552 RPL13P26373 211 aaKnown RBP13.93□□□□□ -0.18
RTN3-213ENST00000543552 PIK3CAP42336 1068 aa13.93□□□□□ -0.18
RTN3-213ENST00000543552 TUBP50607 506 aa13.93□□□□□ -0.18
RTN3-213ENST00000543552 IFRD2Q12894 506 aaPredicted RBP13.93□□□□□ -0.18
RTN3-213ENST00000543552 SRSF5Q13243 272 aaKnown RBP13.93□□□□□ -0.18
RTN3-213ENST00000543552 ZACNQ401N2 412 aa13.93□□□□□ -0.18
RTN3-213ENST00000543552 CEP135Q66GS9 1140 aa13.93□□□□□ -0.18
RTN3-213ENST00000543552 PKN3Q6P5Z2 889 aa13.93□□□□□ -0.18
RTN3-213ENST00000543552 UNC93AQ86WB7 457 aa13.93□□□□□ -0.18
RTN3-213ENST00000543552 CCDC150Q8NCX0 1101 aa13.93□□□□□ -0.18
RTN3-213ENST00000543552 RPLP0P6Q8NHW5 317 aa13.93□□□□□ -0.18
RTN3-213ENST00000543552 FBXO32Q969P5 355 aa13.93□□□□□ -0.18
RTN3-213ENST00000543552 PARD6AQ9NPB6 346 aa13.93□□□□□ -0.18
RTN3-213ENST00000543552 TBC1D14Q9P2M4 693 aa13.93□□□□□ -0.18
RTN3-213ENST00000543552 NME7Q9Y5B8 376 aa13.93□□□□□ -0.18
RTN3-213ENST00000543552 CLDN5O00501 218 aa13.92□□□□□ -0.18
RTN3-213ENST00000543552 AXIN1O15169 862 aa13.92□□□□□ -0.18
RTN3-213ENST00000543552 RHOBTB3O94955 611 aa13.92□□□□□ -0.18
RTN3-213ENST00000543552 MBL2P11226 248 aaPredicted RBP13.92□□□□□ -0.18
RTN3-213ENST00000543552 KRT13P13646 458 aa13.92□□□□□ -0.18
RTN3-213ENST00000543552 EIF2DP41214 584 aaKnown RBP13.92□□□□□ -0.18
RTN3-213ENST00000543552 RAP1GAPP47736 663 aa13.92□□□□□ -0.18
RTN3-213ENST00000543552 CACNA2D1P54289 1103 aa13.92□□□□□ -0.18
RTN3-213ENST00000543552 CDH8P55286 799 aa13.92□□□□□ -0.18
RTN3-213ENST00000543552 ENPEPQ07075 957 aa13.92□□□□□ -0.18
RTN3-213ENST00000543552 HECTD3Q5T447 861 aa13.92□□□□□ -0.18
RTN3-213ENST00000543552 PRR23CQ6ZRP0 262 aa13.92□□□□□ -0.18
RTN3-213ENST00000543552 INTS8Q75QN2 995 aaKnown RBP13.92□□□□□ -0.18
RTN3-213ENST00000543552 FILIP1Q7Z7B0 1213 aa13.92□□□□□ -0.18
RTN3-213ENST00000543552 C11orf74Q86VG3 221 aa13.92□□□□□ -0.18
RTN3-213ENST00000543552 PLEKHO2Q8TD55 490 aa13.92□□□□□ -0.18
RTN3-213ENST00000543552 OTUB2Q96DC9 234 aa13.92□□□□□ -0.18
RTN3-213ENST00000543552 NACA2Q9H009 215 aa13.92□□□□□ -0.18
RTN3-213ENST00000543552 FBXO44Q9H4M3 255 aa13.92□□□□□ -0.18
RTN3-213ENST00000543552 FBRSL1Q9HCM7 1045 aaKnown RBP13.92□□□□□ -0.18
RTN3-213ENST00000543552 KRT82Q9NSB4 513 aa13.92□□□□□ -0.18
RTN3-213ENST00000543552 SMPD4Q9NXE4 827 aa13.92□□□□□ -0.18
RTN3-213ENST00000543552 CFAP97Q9P2B7 532 aa13.92□□□□□ -0.18
RTN3-213ENST00000543552 TRAF3IP3Q9Y228 551 aa13.92□□□□□ -0.18
RTN3-213ENST00000543552 PCDHGA5Q9Y5G8 931 aa13.92□□□□□ -0.18
RTN3-213ENST00000543552 FAM237AA0A1B0GTK4 181 aa13.91□□□□□ -0.18
RTN3-213ENST00000543552 A0A1W2PQ27 194 aa13.91□□□□□ -0.18
RTN3-213ENST00000543552 A0A1W2PQ64 194 aa13.91□□□□□ -0.18
RTN3-213ENST00000543552 A0A1W2PQD8 194 aa13.91□□□□□ -0.18
RTN3-213ENST00000543552 E2F8A0AVK6 867 aa13.91□□□□□ -0.18
RTN3-213ENST00000543552 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.91□□□□□ -0.18
RTN3-213ENST00000543552 AP1G2O75843 785 aa13.91□□□□□ -0.18
RTN3-213ENST00000543552 VNN1O95497 513 aa13.91□□□□□ -0.18
RTN3-213ENST00000543552 ASS1P00966 412 aaKnown RBP13.91□□□□□ -0.18
RTN3-213ENST00000543552 CYP17A1P05093 508 aa13.91□□□□□ -0.18
RTN3-213ENST00000543552 NR2F2P24468 414 aa13.91□□□□□ -0.18
RTN3-213ENST00000543552 PXNP49023 591 aaPredicted RBP13.91□□□□□ -0.18
RTN3-213ENST00000543552 VAMP7P51809 220 aa13.91□□□□□ -0.18
RTN3-213ENST00000543552 NDUFA8P51970 172 aa13.91□□□□□ -0.18
RTN3-213ENST00000543552 SLC5A3P53794 718 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms