RNA–Protein interactions for RNA: ENST00000543405.1

CACNA2D4-216, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 5

Gene CACNA2D4, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-216ENST00000543405 TIE1P35590 1138 aa13.25□□□□□ -0.29
CACNA2D4-216ENST00000543405 ATXN3P54252 364 aaPredicted RBP13.25□□□□□ -0.29
CACNA2D4-216ENST00000543405 USP46P62068 366 aa13.25□□□□□ -0.29
CACNA2D4-216ENST00000543405 BYSLQ13895 437 aaKnown RBP13.25□□□□□ -0.29
CACNA2D4-216ENST00000543405 HNRNPDQ14103 355 aaKnown RBP13.25□□□□□ -0.29
CACNA2D4-216ENST00000543405 DUOXA1Q1HG43 343 aa13.25□□□□□ -0.29
CACNA2D4-216ENST00000543405 RILPL1Q5EBL4 403 aa13.25□□□□□ -0.29
CACNA2D4-216ENST00000543405 EOGTQ5NDL2 527 aa13.25□□□□□ -0.29
CACNA2D4-216ENST00000543405 EMC10Q5UCC4 262 aa13.25□□□□□ -0.29
CACNA2D4-216ENST00000543405 ARL6IP4Q66PJ3 421 aaKnown RBP13.25□□□□□ -0.29
CACNA2D4-216ENST00000543405 LIMS2Q7Z4I7 341 aa13.25□□□□□ -0.29
CACNA2D4-216ENST00000543405 SPATA2LQ8IUW3 424 aaPredicted RBP13.25□□□□□ -0.29
CACNA2D4-216ENST00000543405 BRSK2Q8IWQ3 736 aa13.25□□□□□ -0.29
CACNA2D4-216ENST00000543405 SCN4BQ8IWT1 228 aa13.25□□□□□ -0.29
CACNA2D4-216ENST00000543405 CEP76Q8TAP6 659 aa13.25□□□□□ -0.29
CACNA2D4-216ENST00000543405 MDM1Q8TC05 714 aa13.25□□□□□ -0.29
CACNA2D4-216ENST00000543405 ADAM32Q8TC27 787 aa13.25□□□□□ -0.29
CACNA2D4-216ENST00000543405 HMGB4Q8WW32 186 aa13.25□□□□□ -0.29
CACNA2D4-216ENST00000543405 ADAMTS14Q8WXS8 1223 aa13.25□□□□□ -0.29
CACNA2D4-216ENST00000543405 CEP295NLQ96MC4 621 aa13.25□□□□□ -0.29
CACNA2D4-216ENST00000543405 CAMK1GQ96NX5 476 aa13.25□□□□□ -0.29
CACNA2D4-216ENST00000543405 PNKPQ96T60 521 aa13.25□□□□□ -0.29
CACNA2D4-216ENST00000543405 TTLL2Q9BWV7 592 aa13.25□□□□□ -0.29
CACNA2D4-216ENST00000543405 CCDC86Q9H6F5 360 aaKnown RBP13.25□□□□□ -0.29
CACNA2D4-216ENST00000543405 DNAAF2Q9NVR5 837 aaKnown RBP13.25□□□□□ -0.29
CACNA2D4-216ENST00000543405 AGAP1Q9UPQ3 857 aa13.25□□□□□ -0.29
CACNA2D4-216ENST00000543405 RAXQ9Y2V3 346 aa13.25□□□□□ -0.29
CACNA2D4-216ENST00000543405 ASXL3Q9C0F0 2248 aa13.25□□□□□ -0.29
CACNA2D4-216ENST00000543405 ZNF840PA6NDX5 716 aa13.24□□□□□ -0.29
CACNA2D4-216ENST00000543405 MYMKA6NI61 221 aa13.24□□□□□ -0.29
CACNA2D4-216ENST00000543405 AP5Z1O43299 807 aa13.24□□□□□ -0.29
CACNA2D4-216ENST00000543405 GJB3O75712 270 aa13.24□□□□□ -0.29
CACNA2D4-216ENST00000543405 APODP05090 189 aa13.24□□□□□ -0.29
CACNA2D4-216ENST00000543405 FTH1P19P0C7X4 201 aa13.24□□□□□ -0.29
CACNA2D4-216ENST00000543405 PCSK1P29120 753 aa13.24□□□□□ -0.29
CACNA2D4-216ENST00000543405 GFPT1Q06210 699 aaPredicted RBP13.24□□□□□ -0.29
CACNA2D4-216ENST00000543405 RHBDF2Q6PJF5 856 aa13.24□□□□□ -0.29
CACNA2D4-216ENST00000543405 CCNI2Q6ZMN8 369 aaPredicted RBP13.24□□□□□ -0.29
CACNA2D4-216ENST00000543405 ADGRF2Q8IZF7 708 aa13.24□□□□□ -0.29
CACNA2D4-216ENST00000543405 TOP6BLQ8N6T0 577 aa13.24□□□□□ -0.29
CACNA2D4-216ENST00000543405 HNRNPLLQ8WVV9 542 aaKnown RBP13.24□□□□□ -0.29
CACNA2D4-216ENST00000543405 FAM84AQ96KN4 292 aa13.24□□□□□ -0.29
CACNA2D4-216ENST00000543405 AK8Q96MA6 479 aa13.24□□□□□ -0.29
CACNA2D4-216ENST00000543405 STRA6Q9BX79 667 aa13.24□□□□□ -0.29
CACNA2D4-216ENST00000543405 RNF38Q9H0F5 515 aa13.24□□□□□ -0.29
CACNA2D4-216ENST00000543405 ZDHHC4Q9NPG8 344 aa13.24□□□□□ -0.29
CACNA2D4-216ENST00000543405 BCCIPQ9P287 314 aaKnown RBP eCLIP13.24□□□□□ -0.29
CACNA2D4-216ENST00000543405 SIX4Q9UIU6 781 aa13.24□□□□□ -0.29
CACNA2D4-216ENST00000543405 FARP1Q9Y4F1 1045 aaPredicted RBP13.24□□□□□ -0.29
CACNA2D4-216ENST00000543405 CPQQ9Y646 472 aa13.24□□□□□ -0.29
CACNA2D4-216ENST00000543405 CFAP46Q8IYW2 2715 aa13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 ARHGAP33O14559 1287 aa13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 TBCAO75347 108 aaKnown RBP13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 OAS1P00973 400 aaKnown RBP13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 GABRG2P18507 467 aa13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 GRIA2P42262 883 aa13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 TNFRSF4P43489 277 aa13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 LHX1P48742 406 aa13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 TFAMQ00059 246 aaKnown RBP13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 KDSRQ06136 332 aa13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 RESTQ13127 1097 aa13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 DHX8Q14562 1220 aaKnown RBP13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 MCM6Q14566 821 aa13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 SOWAHAQ2M3V2 549 aa13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 VSTM1Q6UX27 236 aa13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 C4orf50Q6ZRC1 276 aa13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 RABEPKQ7Z6M1 372 aa13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 SLC41A1Q8IVJ1 513 aa13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 ETFBKMTQ8IXQ9 262 aa13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 PNPLA1Q8N8W4 532 aa13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 ZSWIM2Q8NEG5 633 aa13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 KBTBD7Q8WVZ9 684 aa13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 POMGNT1Q8WZA1 660 aa13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 RAD54LQ92698 747 aa13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 MYLPFQ96A32 169 aa13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 HVCN1Q96D96 273 aa13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 LRIG1Q96JA1 1093 aa13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 CD248Q9HCU0 757 aa13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 CRTAC1Q9NQ79 661 aa13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 ARHGEF4Q9NR80 690 aa13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 CACNA2D2Q9NY47 1150 aa13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 TRPM5Q9NZQ8 1165 aa13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 ITGA11Q9UKX5 1188 aa13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 HCN2Q9UL51 889 aa13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 SNX9Q9Y5X1 595 aa13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 PTPRBP23467 1997 aa13.23□□□□□ -0.29
CACNA2D4-216ENST00000543405 IGHV1OR15-9A0A0B4J2B8 117 aa13.22□□□□□ -0.29
CACNA2D4-216ENST00000543405 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.22□□□□□ -0.29
CACNA2D4-216ENST00000543405 SLC9A3R1O14745 358 aaPredicted RBP13.22□□□□□ -0.29
CACNA2D4-216ENST00000543405 SCAMP3O14828 347 aaKnown RBP13.22□□□□□ -0.29
CACNA2D4-216ENST00000543405 SH3BP5O60239 455 aa13.22□□□□□ -0.29
CACNA2D4-216ENST00000543405 ATP2C2O75185 946 aa13.22□□□□□ -0.29
CACNA2D4-216ENST00000543405 ADH1CP00326 375 aa13.22□□□□□ -0.29
CACNA2D4-216ENST00000543405 ADH5P11766 374 aa13.22□□□□□ -0.29
CACNA2D4-216ENST00000543405 PLCG1P19174 1290 aa13.22□□□□□ -0.29
CACNA2D4-216ENST00000543405 RPL6Q02878 288 aaKnown RBP13.22□□□□□ -0.29
CACNA2D4-216ENST00000543405 ZNF33AQ06730 810 aa13.22□□□□□ -0.29
CACNA2D4-216ENST00000543405 SLC14A1Q13336 389 aa13.22□□□□□ -0.29
CACNA2D4-216ENST00000543405 POSTNQ15063 836 aa13.22□□□□□ -0.29
CACNA2D4-216ENST00000543405 TRIP6Q15654 476 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms