RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 DMAP1Q9NPF5 467 aaPredicted RBP11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 HCFC1R1Q9NWW0 138 aa11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 ZDHHC7Q9NXF8 308 aa11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 DNMT3BQ9UBC3 853 aaKnown RBP11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 CCDC195A0A1B0GUA6 201 aa11.27□□□□□ -0.61
NPIPB3-210ENST00000542817 SSU72P8A0A1W2PR75 194 aa11.27□□□□□ -0.61
NPIPB3-210ENST00000542817 SLC38A8A6NNN8 435 aa11.27□□□□□ -0.61
NPIPB3-210ENST00000542817 PRRG1O14668 218 aa11.27□□□□□ -0.61
NPIPB3-210ENST00000542817 TRIM66O15016 1216 aa11.27□□□□□ -0.61
NPIPB3-210ENST00000542817 MED7O43513 233 aa11.27□□□□□ -0.61
NPIPB3-210ENST00000542817 SETSIPP0DME0 302 aa11.27□□□□□ -0.61
NPIPB3-210ENST00000542817 GRIK1P39086 918 aa11.27□□□□□ -0.61
NPIPB3-210ENST00000542817 CCR2P41597 374 aa11.27□□□□□ -0.61
NPIPB3-210ENST00000542817 RGS7P49802 495 aa11.27□□□□□ -0.61
NPIPB3-210ENST00000542817 SLC5A3P53794 718 aa11.27□□□□□ -0.61
NPIPB3-210ENST00000542817 EPHA5P54756 1037 aa11.27□□□□□ -0.61
NPIPB3-210ENST00000542817 CENPCQ03188 943 aa11.27□□□□□ -0.61
NPIPB3-210ENST00000542817 MTF1Q14872 753 aa11.27□□□□□ -0.61
NPIPB3-210ENST00000542817 CCDC85BQ15834 202 aaPredicted RBP11.27□□□□□ -0.61
NPIPB3-210ENST00000542817 NAA35Q5VZE5 725 aa11.27□□□□□ -0.61
NPIPB3-210ENST00000542817 PM20D1Q6GTS8 502 aa11.27□□□□□ -0.61
NPIPB3-210ENST00000542817 RAD9BQ6WBX8 426 aa11.27□□□□□ -0.61
NPIPB3-210ENST00000542817 CCDC149Q6ZUS6 474 aa11.27□□□□□ -0.61
NPIPB3-210ENST00000542817 MTERF4Q7Z6M4 381 aaKnown RBP11.27□□□□□ -0.61
NPIPB3-210ENST00000542817 DNAJB7Q7Z6W7 309 aaPredicted RBP11.27□□□□□ -0.61
NPIPB3-210ENST00000542817 HS6ST3Q8IZP7 471 aa11.27□□□□□ -0.61
NPIPB3-210ENST00000542817 MICALL1Q8N3F8 863 aa11.27□□□□□ -0.61
NPIPB3-210ENST00000542817 CLEC4CQ8WTT0 213 aa11.27□□□□□ -0.61
NPIPB3-210ENST00000542817 CPA5Q8WXQ8 436 aa11.27□□□□□ -0.61
NPIPB3-210ENST00000542817 PSMG2Q969U7 264 aa11.27□□□□□ -0.61
NPIPB3-210ENST00000542817 PIWIL1Q96J94 861 aaKnown RBP11.27□□□□□ -0.61
NPIPB3-210ENST00000542817 PRKD2Q9BZL6 878 aa11.27□□□□□ -0.61
NPIPB3-210ENST00000542817 ADAMTS1Q9UHI8 967 aa11.27□□□□□ -0.61
NPIPB3-210ENST00000542817 NCANO14594 1321 aa11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 TCRBV5S1A1TA0A578 114 aa11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 E5RJQ4 531 aa11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 PIK3R2O00459 728 aa11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 PAPSS1O43252 624 aaPredicted RBP11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 LSM8O95777 96 aaKnown RBP11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 F11P03951 625 aa11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 ERBB2P04626 1255 aa11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 HNRNPA1P09651 372 aaKnown RBP eCLIP11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 ZDHHC11BP0C7U3 371 aa11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 MMP8P22894 467 aa11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 ELF1P32519 619 aa11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 GABRB2P47870 512 aa11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 RPL10AP62906 217 aaKnown RBP11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 NTHL1P78549 312 aa11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 SLC5A9Q2M3M2 681 aa11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 C2CD6Q53TS8 623 aa11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 PRSS36Q5K4E3 855 aa11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 PPM1LQ5SGD2 360 aa11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 LIN9Q5TKA1 542 aa11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 TMC5Q6UXY8 1006 aa11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 DENND5BQ6ZUT9 1274 aa11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 GAREM2Q75VX8 874 aa11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 SCD5Q86SK9 330 aa11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 GPR149Q86SP6 731 aa11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 PHF13Q86YI8 300 aaPredicted RBP11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 FMNL3Q8IVF7 1028 aa11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 NUP93Q8N1F7 819 aa11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 PPP2R3CQ969Q6 453 aa11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 HSFY1Q96LI6 401 aa11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 CEP295NLQ96MC4 621 aa11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 ISCUQ9H1K1 167 aa11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 KCNF1Q9H3M0 494 aa11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 NHEJ1Q9H9Q4 299 aaPredicted RBP11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 DZANK1Q9NVP4 752 aa11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 OSER1Q9NX31 292 aa11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 CLDND1Q9NY35 253 aa11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 HESX1Q9UBX0 185 aa11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 NAGPAQ9UK23 515 aa11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 REXO2Q9Y3B8 237 aaKnown RBP11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 BZW2Q9Y6E2 419 aaKnown RBP11.26□□□□□ -0.61
NPIPB3-210ENST00000542817 ATP8B3O60423 1300 aa11.25□□□□□ -0.61
NPIPB3-210ENST00000542817 C2orf16Q68DN1 1984 aa11.25□□□□□ -0.61
NPIPB3-210ENST00000542817 SOWAHDA6NJG2 315 aa11.25□□□□□ -0.61
NPIPB3-210ENST00000542817 NCK2O43639 380 aa11.25□□□□□ -0.61
NPIPB3-210ENST00000542817 LCA5LO95447 670 aa11.25□□□□□ -0.61
NPIPB3-210ENST00000542817 FYNP06241 537 aa11.25□□□□□ -0.61
NPIPB3-210ENST00000542817 TPM1P09493 284 aa11.25□□□□□ -0.61
NPIPB3-210ENST00000542817 CCDC172P0C7W6 258 aa11.25□□□□□ -0.61
NPIPB3-210ENST00000542817 GZMAP12544 262 aa11.25□□□□□ -0.61
NPIPB3-210ENST00000542817 ALDH1A3P47895 512 aa11.25□□□□□ -0.61
NPIPB3-210ENST00000542817 CCZ1BP86790 482 aa11.25□□□□□ -0.61
NPIPB3-210ENST00000542817 CCZ1P86791 482 aaPredicted RBP11.25□□□□□ -0.61
NPIPB3-210ENST00000542817 GFPT1Q06210 699 aaPredicted RBP11.25□□□□□ -0.61
NPIPB3-210ENST00000542817 TAF5Q15542 800 aa11.25□□□□□ -0.61
NPIPB3-210ENST00000542817 ACAD10Q6JQN1 1059 aa11.25□□□□□ -0.61
NPIPB3-210ENST00000542817 TRIM72Q6ZMU5 477 aa11.25□□□□□ -0.61
NPIPB3-210ENST00000542817 MON1BQ7L1V2 547 aa11.25□□□□□ -0.61
NPIPB3-210ENST00000542817 ZSCAN30Q86W11 494 aa11.25□□□□□ -0.61
NPIPB3-210ENST00000542817 XYLT1Q86Y38 959 aa11.25□□□□□ -0.61
NPIPB3-210ENST00000542817 SMRP1Q8NCR6 262 aa11.25□□□□□ -0.61
NPIPB3-210ENST00000542817 TMEM35BQ8NCS4 154 aa11.25□□□□□ -0.61
NPIPB3-210ENST00000542817 SUSD6Q92537 303 aa11.25□□□□□ -0.61
NPIPB3-210ENST00000542817 TCEAL4Q96EI5 215 aa11.25□□□□□ -0.61
NPIPB3-210ENST00000542817 TRMT2BQ96GJ1 504 aaKnown RBP11.25□□□□□ -0.61
NPIPB3-210ENST00000542817 PPP1R13BQ96KQ4 1090 aa11.25□□□□□ -0.61
NPIPB3-210ENST00000542817 APOL5Q9BWW9 433 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms