RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 ALKBH5Q6P6C2 394 aaKnown RBP24.35■■□□□ 1.49
HOMER3-205ENST00000542541 TMEM110Q86TL2 294 aa24.35■■□□□ 1.49
HOMER3-205ENST00000542541 MICALL1Q8N3F8 863 aa24.35■■□□□ 1.49
HOMER3-205ENST00000542541 GIPC2Q8TF65 315 aa24.35■■□□□ 1.49
HOMER3-205ENST00000542541 ZNF512Q96ME7 567 aaPredicted RBP24.35■■□□□ 1.49
HOMER3-205ENST00000542541 FBXO44Q9H4M3 255 aa24.35■■□□□ 1.49
HOMER3-205ENST00000542541 SFXN1Q9H9B4 322 aa24.35■■□□□ 1.49
HOMER3-205ENST00000542541 CYTH4Q9UIA0 394 aa24.35■■□□□ 1.49
HOMER3-205ENST00000542541 NAGPAQ9UK23 515 aa24.35■■□□□ 1.49
HOMER3-205ENST00000542541 SLC38A8A6NNN8 435 aa24.35■■□□□ 1.49
HOMER3-205ENST00000542541 TNFRSF10BO14763 440 aa24.35■■□□□ 1.49
HOMER3-205ENST00000542541 XYLBO75191 536 aa24.35■■□□□ 1.49
HOMER3-205ENST00000542541 IPO7O95373 1038 aaKnown RBP24.35■■□□□ 1.49
HOMER3-205ENST00000542541 SLC5A3P53794 718 aa24.35■■□□□ 1.49
HOMER3-205ENST00000542541 GFPT1Q06210 699 aaPredicted RBP24.35■■□□□ 1.49
HOMER3-205ENST00000542541 CCDC122Q5T0U0 273 aa24.35■■□□□ 1.49
HOMER3-205ENST00000542541 PHF13Q86YI8 300 aaPredicted RBP24.35■■□□□ 1.49
HOMER3-205ENST00000542541 SIX6OS1Q8N1H7 587 aa24.35■■□□□ 1.49
HOMER3-205ENST00000542541 VN1R2Q8NFZ6 395 aa24.35■■□□□ 1.49
HOMER3-205ENST00000542541 GPR152Q8TDT2 470 aa24.35■■□□□ 1.49
HOMER3-205ENST00000542541 MTMR10Q9NXD2 777 aa24.35■■□□□ 1.49
HOMER3-205ENST00000542541 EPN1Q9Y6I3 576 aaPredicted RBP24.35■■□□□ 1.49
HOMER3-205ENST00000542541 PRRC2BQ5JSZ5 2229 aaKnown RBP24.34■■□□□ 1.49
HOMER3-205ENST00000542541 SOWAHDA6NJG2 315 aa24.34■■□□□ 1.49
HOMER3-205ENST00000542541 POU2F2P09086 479 aa24.34■■□□□ 1.49
HOMER3-205ENST00000542541 FOSL2P15408 326 aa24.34■■□□□ 1.49
HOMER3-205ENST00000542541 HOXB8P17481 243 aaPredicted RBP24.34■■□□□ 1.49
HOMER3-205ENST00000542541 MMP8P22894 467 aa24.34■■□□□ 1.49
HOMER3-205ENST00000542541 TKTL1P51854 596 aa24.34■■□□□ 1.49
HOMER3-205ENST00000542541 RBM10P98175 930 aaKnown RBP24.34■■□□□ 1.49
HOMER3-205ENST00000542541 SPA17Q15506 151 aa24.34■■□□□ 1.49
HOMER3-205ENST00000542541 PSMG2Q969U7 264 aa24.34■■□□□ 1.49
HOMER3-205ENST00000542541 C18orf8Q96DM3 657 aa24.34■■□□□ 1.49
HOMER3-205ENST00000542541 VCPIP1Q96JH7 1222 aa24.34■■□□□ 1.49
HOMER3-205ENST00000542541 GUCD1Q96NT3 240 aa24.34■■□□□ 1.49
HOMER3-205ENST00000542541 CPXM1Q96SM3 734 aa24.34■■□□□ 1.49
HOMER3-205ENST00000542541 TMCO5BA8MYB1 307 aa24.33■■□□□ 1.49
HOMER3-205ENST00000542541 ARHGAP6O43182 974 aa24.33■■□□□ 1.49
HOMER3-205ENST00000542541 RFPL2O75678 378 aa24.33■■□□□ 1.49
HOMER3-205ENST00000542541 FBXO21O94952 628 aa24.33■■□□□ 1.49
HOMER3-205ENST00000542541 FTLP02792 175 aaPredicted RBP24.33■■□□□ 1.49
HOMER3-205ENST00000542541 C10orf76Q5T2E6 689 aa24.33■■□□□ 1.49
HOMER3-205ENST00000542541 DNAJB7Q7Z6W7 309 aaPredicted RBP24.33■■□□□ 1.49
HOMER3-205ENST00000542541 CMASQ8NFW8 434 aaPredicted RBP24.33■■□□□ 1.49
HOMER3-205ENST00000542541 PRKD2Q9BZL6 878 aa24.33■■□□□ 1.49
HOMER3-205ENST00000542541 ISCUQ9H1K1 167 aa24.33■■□□□ 1.49
HOMER3-205ENST00000542541 LUC7LQ9NQ29 371 aaKnown RBP24.33■■□□□ 1.49
HOMER3-205ENST00000542541 IL37Q9NZH6 218 aa24.33■■□□□ 1.49
HOMER3-205ENST00000542541 ADAM22Q9P0K1 906 aa24.33■■□□□ 1.49
HOMER3-205ENST00000542541 STRIP2Q9ULQ0 834 aa24.33■■□□□ 1.49
HOMER3-205ENST00000542541 PTPRDP23468 1912 aa24.33■■□□□ 1.48
HOMER3-205ENST00000542541 CCDC195A0A1B0GUA6 201 aa24.32■■□□□ 1.48
HOMER3-205ENST00000542541 CCL16O15467 120 aa24.32■■□□□ 1.48
HOMER3-205ENST00000542541 NDUFA10O95299 355 aa24.32■■□□□ 1.48
HOMER3-205ENST00000542541 CALB1P05937 261 aa24.32■■□□□ 1.48
HOMER3-205ENST00000542541 LCP1P13796 627 aa24.32■■□□□ 1.48
HOMER3-205ENST00000542541 YWHAQP27348 245 aa24.32■■□□□ 1.48
HOMER3-205ENST00000542541 GABRB2P47870 512 aa24.32■■□□□ 1.48
HOMER3-205ENST00000542541 C1QBPQ07021 282 aaKnown RBP24.32■■□□□ 1.48
HOMER3-205ENST00000542541 ADIGQ0VDE8 80 aa24.32■■□□□ 1.48
HOMER3-205ENST00000542541 CTC1Q2NKJ3 1217 aa24.32■■□□□ 1.48
HOMER3-205ENST00000542541 PTPN20Q4JDL3 420 aa24.32■■□□□ 1.48
HOMER3-205ENST00000542541 GPRIN1Q7Z2K8 1008 aa24.32■■□□□ 1.48
HOMER3-205ENST00000542541 ZDHHC17Q8IUH5 632 aa24.32■■□□□ 1.48
HOMER3-205ENST00000542541 TRIM11Q96F44 468 aa24.32■■□□□ 1.48
HOMER3-205ENST00000542541 CNGB3Q9NQW8 809 aa24.32■■□□□ 1.48
HOMER3-205ENST00000542541 SPTLC3Q9NUV7 552 aa24.32■■□□□ 1.48
HOMER3-205ENST00000542541 TAS2R14Q9NYV8 317 aa24.32■■□□□ 1.48
HOMER3-205ENST00000542541 UXTQ9UBK9 157 aaPredicted RBP24.32■■□□□ 1.48
HOMER3-205ENST00000542541 USP3Q9Y6I4 520 aa24.32■■□□□ 1.48
HOMER3-205ENST00000542541 PLXNA3P51805 1871 aa24.32■■□□□ 1.48
HOMER3-205ENST00000542541 EYSQ5T1H1 3165 aa24.32■■□□□ 1.48
HOMER3-205ENST00000542541 EIF3CLB5ME19 914 aaKnown RBP24.32■■□□□ 1.48
HOMER3-205ENST00000542541 E5RJQ4 531 aa24.32■■□□□ 1.48
HOMER3-205ENST00000542541 LINC01565O15544 149 aa24.32■■□□□ 1.48
HOMER3-205ENST00000542541 GLP2RO95838 553 aa24.32■■□□□ 1.48
HOMER3-205ENST00000542541 ANKRD54Q6NXT1 300 aa24.32■■□□□ 1.48
HOMER3-205ENST00000542541 MMS22LQ6ZRQ5 1243 aa24.32■■□□□ 1.48
HOMER3-205ENST00000542541 SCML4Q8N228 414 aa24.32■■□□□ 1.48
HOMER3-205ENST00000542541 SCAMP5Q8TAC9 235 aa24.32■■□□□ 1.48
HOMER3-205ENST00000542541 PABPC5Q96DU9 382 aaKnown RBP24.32■■□□□ 1.48
HOMER3-205ENST00000542541 TRMT2BQ96GJ1 504 aaKnown RBP24.32■■□□□ 1.48
HOMER3-205ENST00000542541 MYRFLQ96LU7 910 aa24.32■■□□□ 1.48
HOMER3-205ENST00000542541 EIF3CQ99613 913 aaKnown RBP24.32■■□□□ 1.48
HOMER3-205ENST00000542541 TTLL2Q9BWV7 592 aa24.32■■□□□ 1.48
HOMER3-205ENST00000542541 CLDND1Q9NY35 253 aa24.32■■□□□ 1.48
HOMER3-205ENST00000542541 WDR35Q9P2L0 1181 aa24.32■■□□□ 1.48
HOMER3-205ENST00000542541 MAGED2Q9UNF1 606 aaPredicted RBP24.32■■□□□ 1.48
HOMER3-205ENST00000542541 SART1O43290 800 aaKnown RBP24.31■■□□□ 1.48
HOMER3-205ENST00000542541 PAPLNO95428 1278 aa24.31■■□□□ 1.48
HOMER3-205ENST00000542541 LCA5LO95447 670 aa24.31■■□□□ 1.48
HOMER3-205ENST00000542541 ZBED1O96006 694 aa24.31■■□□□ 1.48
HOMER3-205ENST00000542541 PTPN2P17706 415 aa24.31■■□□□ 1.48
HOMER3-205ENST00000542541 IFRD2Q12894 506 aaPredicted RBP24.31■■□□□ 1.48
HOMER3-205ENST00000542541 COL19A1Q14993 1142 aa24.31■■□□□ 1.48
HOMER3-205ENST00000542541 RAD9BQ6WBX8 426 aa24.31■■□□□ 1.48
HOMER3-205ENST00000542541 SCUBE3Q8IX30 993 aa24.31■■□□□ 1.48
HOMER3-205ENST00000542541 MCOLN2Q8IZK6 566 aa24.31■■□□□ 1.48
HOMER3-205ENST00000542541 SLITRK1Q96PX8 696 aa24.31■■□□□ 1.48
HOMER3-205ENST00000542541 C11orf70Q9BRQ4 267 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms