RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 UNC45BQ8IWX7 931 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 RASGEF1CQ8N431 466 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 PABPC5Q96DU9 382 aaKnown RBP16.75■□□□□ 0.27
VARS2-212ENST00000542001 NUF2Q9BZD4 464 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 ATXN3LQ9H3M9 355 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 APOBEC3GQ9HC16 384 aaKnown RBP16.75■□□□□ 0.27
VARS2-212ENST00000542001 PARP4Q9UKK3 1724 aaKnown RBP16.74■□□□□ 0.27
VARS2-212ENST00000542001 ATP6V1G2O95670 118 aa16.74■□□□□ 0.27
VARS2-212ENST00000542001 ENO3P13929 434 aaPredicted RBP16.74■□□□□ 0.27
VARS2-212ENST00000542001 SERPINB3P29508 390 aa16.74■□□□□ 0.27
VARS2-212ENST00000542001 RCN1Q15293 331 aa16.74■□□□□ 0.27
VARS2-212ENST00000542001 TXNRD3NBQ6F5E7 133 aa16.74■□□□□ 0.27
VARS2-212ENST00000542001 ANKRD13AQ8IZ07 590 aa16.74■□□□□ 0.27
VARS2-212ENST00000542001 DDX27Q96GQ7 796 aaKnown RBP16.74■□□□□ 0.27
VARS2-212ENST00000542001 MYLK2Q9H1R3 596 aa16.74■□□□□ 0.27
VARS2-212ENST00000542001 UPP2O95045 317 aa16.74■□□□□ 0.27
VARS2-212ENST00000542001 RPL22P35268 128 aaKnown RBP16.74■□□□□ 0.27
VARS2-212ENST00000542001 FSTL1Q12841 308 aa16.74■□□□□ 0.27
VARS2-212ENST00000542001 MORF4L2Q15014 288 aa16.74■□□□□ 0.27
VARS2-212ENST00000542001 AFAP1L2Q8N4X5 818 aa16.74■□□□□ 0.27
VARS2-212ENST00000542001 BHMTQ93088 406 aa16.74■□□□□ 0.27
VARS2-212ENST00000542001 SLITRK1Q96PX8 696 aa16.74■□□□□ 0.27
VARS2-212ENST00000542001 SUDS3Q9H7L9 328 aaPredicted RBP16.74■□□□□ 0.27
VARS2-212ENST00000542001 NOCTQ9UK39 431 aaKnown RBP16.74■□□□□ 0.27
VARS2-212ENST00000542001 GRIN2DO15399 1336 aa16.74■□□□□ 0.27
VARS2-212ENST00000542001 FSCN2O14926 492 aa16.74■□□□□ 0.27
VARS2-212ENST00000542001 LUC7L3O95232 432 aaKnown RBP16.74■□□□□ 0.27
VARS2-212ENST00000542001 CCDC130P13994 396 aa16.74■□□□□ 0.27
VARS2-212ENST00000542001 PMLP29590 882 aa16.74■□□□□ 0.27
VARS2-212ENST00000542001 AQP5P55064 265 aa16.74■□□□□ 0.27
VARS2-212ENST00000542001 NCKAP1LP55160 1127 aa16.74■□□□□ 0.27
VARS2-212ENST00000542001 CAPRIN2Q6IMN6 1127 aaKnown RBP16.74■□□□□ 0.27
VARS2-212ENST00000542001 CYP4X1Q8N118 509 aa16.74■□□□□ 0.27
VARS2-212ENST00000542001 ART4Q93070 314 aa16.74■□□□□ 0.27
VARS2-212ENST00000542001 ATP6V1E2Q96A05 226 aa16.74■□□□□ 0.27
VARS2-212ENST00000542001 CNPY3Q9BT09 278 aa16.74■□□□□ 0.27
VARS2-212ENST00000542001 ANLNQ9NQW6 1124 aa16.74■□□□□ 0.27
VARS2-212ENST00000542001 IL1RAPL1Q9NZN1 696 aa16.74■□□□□ 0.27
VARS2-212ENST00000542001 BTNL10A8MVZ5 291 aa16.73■□□□□ 0.27
VARS2-212ENST00000542001 ATP5HO75947 161 aa16.73■□□□□ 0.27
VARS2-212ENST00000542001 RPS12P25398 132 aaKnown RBP16.73■□□□□ 0.27
VARS2-212ENST00000542001 PTK6Q13882 451 aa16.73■□□□□ 0.27
VARS2-212ENST00000542001 BZW1Q7L1Q6 419 aaKnown RBP16.73■□□□□ 0.27
VARS2-212ENST00000542001 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.73■□□□□ 0.27
VARS2-212ENST00000542001 NDRG1Q92597 394 aaKnown RBP16.73■□□□□ 0.27
VARS2-212ENST00000542001 C20orf96Q9NUD7 363 aaPredicted RBP16.73■□□□□ 0.27
VARS2-212ENST00000542001 ZNF142P52746 1687 aaPredicted RBP16.73■□□□□ 0.27
VARS2-212ENST00000542001 EEF2KO00418 725 aaKnown RBP16.73■□□□□ 0.27
VARS2-212ENST00000542001 COG7P83436 770 aa16.73■□□□□ 0.27
VARS2-212ENST00000542001 BOLA3Q53S33 107 aa16.73■□□□□ 0.27
VARS2-212ENST00000542001 EP400NLQ6ZTU2 488 aa16.73■□□□□ 0.27
VARS2-212ENST00000542001 FASTKD5Q7L8L6 764 aaKnown RBP16.73■□□□□ 0.27
VARS2-212ENST00000542001 NIPA1Q7RTP0 329 aa16.73■□□□□ 0.27
VARS2-212ENST00000542001 SAMD3Q8N6K7 520 aa16.73■□□□□ 0.27
VARS2-212ENST00000542001 RNF148Q8N7C7 305 aa16.73■□□□□ 0.27
VARS2-212ENST00000542001 GLIS1Q8NBF1 620 aa16.73■□□□□ 0.27
VARS2-212ENST00000542001 OPTNQ96CV9 577 aa16.73■□□□□ 0.27
VARS2-212ENST00000542001 MX2P20592 715 aa16.73■□□□□ 0.27
VARS2-212ENST00000542001 NSUN2Q08J23 767 aaKnown RBP eCLIP16.73■□□□□ 0.27
VARS2-212ENST00000542001 USP10Q14694 798 aaKnown RBP16.73■□□□□ 0.27
VARS2-212ENST00000542001 UBAP2Q5T6F2 1119 aaKnown RBP16.73■□□□□ 0.27
VARS2-212ENST00000542001 REPS2Q8NFH8 660 aa16.73■□□□□ 0.27
VARS2-212ENST00000542001 GPRC5AQ8NFJ5 357 aa16.73■□□□□ 0.27
VARS2-212ENST00000542001 ZNF516Q92618 1163 aa16.73■□□□□ 0.27
VARS2-212ENST00000542001 MTBPQ96DY7 904 aa16.73■□□□□ 0.27
VARS2-212ENST00000542001 TNIP3Q96KP6 325 aa16.73■□□□□ 0.27
VARS2-212ENST00000542001 WWP1Q9H0M0 922 aa16.73■□□□□ 0.27
VARS2-212ENST00000542001 TASP1Q9H6P5 420 aa16.73■□□□□ 0.27
VARS2-212ENST00000542001 LRRC19Q9H756 370 aa16.73■□□□□ 0.27
VARS2-212ENST00000542001 AVENQ9NQS1 362 aaPredicted RBP16.73■□□□□ 0.27
VARS2-212ENST00000542001 GRHL1Q9NZI5 618 aa16.73■□□□□ 0.27
VARS2-212ENST00000542001 AP4E1Q9UPM8 1137 aa16.73■□□□□ 0.27
VARS2-212ENST00000542001 ZMYM2Q9UBW7 1377 aa16.73■□□□□ 0.27
VARS2-212ENST00000542001 LIASO43766 372 aa16.72■□□□□ 0.27
VARS2-212ENST00000542001 RPS6KA5O75582 802 aa16.72■□□□□ 0.27
VARS2-212ENST00000542001 PPM1FP49593 454 aaPredicted RBP16.72■□□□□ 0.27
VARS2-212ENST00000542001 PTPN20Q4JDL3 420 aa16.72■□□□□ 0.27
VARS2-212ENST00000542001 POLNQ7Z5Q5 900 aa16.72■□□□□ 0.27
VARS2-212ENST00000542001 TMEM130Q8N3G9 435 aa16.72■□□□□ 0.27
VARS2-212ENST00000542001 PLEKHA5Q9HAU0 1116 aa16.72■□□□□ 0.27
VARS2-212ENST00000542001 PCDH9Q9HC56 1237 aa16.72■□□□□ 0.27
VARS2-212ENST00000542001 PRG3Q9Y2Y8 225 aaPredicted RBP16.72■□□□□ 0.27
VARS2-212ENST00000542001 MYO5AQ9Y4I1 1855 aaKnown RBP16.72■□□□□ 0.27
VARS2-212ENST00000542001 CCDC22O60826 627 aa16.72■□□□□ 0.27
VARS2-212ENST00000542001 FAM155BO75949 473 aa16.72■□□□□ 0.27
VARS2-212ENST00000542001 IL18RAPO95256 599 aa16.72■□□□□ 0.27
VARS2-212ENST00000542001 ZCCHC18P0CG32 403 aa16.72■□□□□ 0.27
VARS2-212ENST00000542001 MLH1P40692 756 aa16.72■□□□□ 0.27
VARS2-212ENST00000542001 MAP3K7CLP57077 242 aa16.72■□□□□ 0.27
VARS2-212ENST00000542001 IL1RL1Q01638 556 aa16.72■□□□□ 0.27
VARS2-212ENST00000542001 LCA5Q86VQ0 697 aa16.72■□□□□ 0.27
VARS2-212ENST00000542001 EFCAB3Q8N7B9 438 aa16.72■□□□□ 0.27
VARS2-212ENST00000542001 AGAP11Q8TF27 550 aa16.72■□□□□ 0.27
VARS2-212ENST00000542001 PIK3R5Q8WYR1 880 aa16.72■□□□□ 0.27
VARS2-212ENST00000542001 ZNF75CPQ92670 426 aaPredicted RBP16.72■□□□□ 0.27
VARS2-212ENST00000542001 TMA16Q96EY4 203 aaKnown RBP16.72■□□□□ 0.27
VARS2-212ENST00000542001 MECRQ9BV79 373 aa16.72■□□□□ 0.27
VARS2-212ENST00000542001 TMEM120AQ9BXJ8 343 aa16.72■□□□□ 0.27
VARS2-212ENST00000542001 MEI4A8MW99 385 aa16.72■□□□□ 0.27
VARS2-212ENST00000542001 B3GAT3O94766 335 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms