RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 USP38Q8NB14 1042 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 APPL2Q8NEU8 664 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 CLEC4CQ8WTT0 213 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 NDRG1Q92597 394 aaKnown RBP8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 MS4A14Q96JA4 679 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 CPXM1Q96SM3 734 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 HINFPQ9BQA5 517 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 NUP85Q9BW27 656 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 ISCUQ9H1K1 167 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 EPC1Q9H2F5 836 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 RASSF4Q9H2L5 321 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 CRISPLD1Q9H336 500 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 ST7Q9NRC1 585 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 TMEM30AQ9NV96 361 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 PSD3Q9NYI0 1048 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 TSPAN16Q9UKR8 245 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 BARX2Q9UMQ3 279 aaPredicted RBP8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 GIT1Q9Y2X7 761 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 COL4A6Q14031 1691 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 KIAA1671Q9BY89 1806 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 TRANK1O15050 2925 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 GOLGA6L9A6NEM1 432 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 TBKBP1A7MCY6 615 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 O00370 1275 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 HUS1O60921 280 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 CAND2O75155 1236 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 GRAP2O75791 330 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 BEST1O76090 585 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 ZRANB2O95218 330 aaKnown RBP eCLIP8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 CYP1A1P04798 512 aaPredicted RBP8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 TCF4P15884 667 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 GJC1P36383 396 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 GNL1P36915 607 aaPredicted RBP8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 NSFP46459 744 aaKnown RBP8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 RAB27AP51159 221 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 CACNA2D1P54289 1103 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 RPL7AP62424 266 aaKnown RBP8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 MRPS25P82663 173 aaKnown RBP8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 INCA1Q0VD86 236 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 SV2CQ496J9 727 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 PTPN20Q4JDL3 420 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 RAB6CQ53S08 254 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 MDH1BQ5I0G3 518 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 NOMO2Q5JPE7 1267 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 EFHC2Q5JST6 749 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 ACAD10Q6JQN1 1059 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 AADACL2Q6P093 401 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 TMCO3Q6UWJ1 677 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 GLB1LQ6UWU2 654 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 DSTYKQ6XUX3 929 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 MON1BQ7L1V2 547 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 DAAM2Q86T65 1068 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 CEP57Q86XR8 500 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 NT5DC4Q86YG4 428 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 HACE1Q8IYU2 909 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 MCOLN2Q8IZK6 566 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 EMC1Q8N766 993 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 LRRC52Q8N7C0 313 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 TPCN2Q8NHX9 752 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 COG1Q8WTW3 980 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 BCL7CQ8WUZ0 217 aaPredicted RBP8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 SEPT8Q92599 483 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 TAF4BQ92750 862 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 B3GNT5Q9BYG0 378 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 UBXN6Q9BZV1 441 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 RAB6CQ9H0N0 254 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 PLEKHA4Q9H4M7 779 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 VRTNQ9H8Y1 702 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 ZNF446Q9NWS9 450 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 CNOT8Q9UFF9 292 aaKnown RBP8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 LRFN2Q9ULH4 789 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 PCDHB7Q9Y5E2 793 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 LTBP2Q14767 1821 aa8.17□□□□□ -1.1
AC005840.3-201ENST00000541888 NLRC5Q86WI3 1866 aa8.16□□□□□ -1.1
AC005840.3-201ENST00000541888 CTAGE9A4FU28 777 aa8.16□□□□□ -1.1
AC005840.3-201ENST00000541888 ANKRD62A6NC57 917 aa8.16□□□□□ -1.1
AC005840.3-201ENST00000541888 ERBB2P04626 1255 aa8.16□□□□□ -1.1
AC005840.3-201ENST00000541888 PFKMP08237 780 aa8.16□□□□□ -1.1
AC005840.3-201ENST00000541888 TMEM253P0C7T8 217 aa8.16□□□□□ -1.1
AC005840.3-201ENST00000541888 P4HA1P13674 534 aa8.16□□□□□ -1.1
AC005840.3-201ENST00000541888 RAG1P15918 1043 aa8.16□□□□□ -1.1
AC005840.3-201ENST00000541888 LRPAP1P30533 357 aa8.16□□□□□ -1.1
AC005840.3-201ENST00000541888 EPHB4P54760 987 aa8.16□□□□□ -1.1
AC005840.3-201ENST00000541888 PTP4A2Q12974 167 aa8.16□□□□□ -1.1
AC005840.3-201ENST00000541888 GRIK3Q13003 919 aa8.16□□□□□ -1.1
AC005840.3-201ENST00000541888 TUSC3Q13454 348 aa8.16□□□□□ -1.1
AC005840.3-201ENST00000541888 TAF5Q15542 800 aa8.16□□□□□ -1.1
AC005840.3-201ENST00000541888 NECAB2Q7Z6G3 386 aa8.16□□□□□ -1.1
AC005840.3-201ENST00000541888 C7orf61Q8IZ16 206 aa8.16□□□□□ -1.1
AC005840.3-201ENST00000541888 ABI1Q8IZP0 508 aa8.16□□□□□ -1.1
AC005840.3-201ENST00000541888 GOLGA6L1Q8N7Z2 621 aa8.16□□□□□ -1.1
AC005840.3-201ENST00000541888 SLC2A14Q8TDB8 520 aa8.16□□□□□ -1.1
AC005840.3-201ENST00000541888 ACSF2Q96CM8 615 aaPredicted RBP8.16□□□□□ -1.1
AC005840.3-201ENST00000541888 PGBD4Q96DM1 585 aa8.16□□□□□ -1.1
AC005840.3-201ENST00000541888 ZNF560Q96MR9 790 aa8.16□□□□□ -1.1
AC005840.3-201ENST00000541888 CASD1Q96PB1 797 aa8.16□□□□□ -1.1
AC005840.3-201ENST00000541888 NOX5Q96PH1 765 aa8.16□□□□□ -1.1
AC005840.3-201ENST00000541888 NAPGQ99747 312 aaPredicted RBP8.16□□□□□ -1.1
AC005840.3-201ENST00000541888 RTP3Q9BQQ7 232 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms