RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 CCDC73Q6ZRK6 1079 aa13.96□□□□□ -0.17
SCARB1-207ENST00000541661 WDR49Q8IV35 697 aa13.96□□□□□ -0.17
SCARB1-207ENST00000541661 ALLCQ8N6M5 410 aa13.96□□□□□ -0.17
SCARB1-207ENST00000541661 NOC3LQ8WTT2 800 aaKnown RBP13.96□□□□□ -0.17
SCARB1-207ENST00000541661 FNBP1Q96RU3 617 aa13.96□□□□□ -0.17
SCARB1-207ENST00000541661 ZMIZ1Q9ULJ6 1067 aa13.96□□□□□ -0.17
SCARB1-207ENST00000541661 CPQQ9Y646 472 aa13.96□□□□□ -0.17
SCARB1-207ENST00000541661 SPEGQ15772 3267 aa13.96□□□□□ -0.18
SCARB1-207ENST00000541661 TMEM8BA6NDV4 472 aa13.95□□□□□ -0.18
SCARB1-207ENST00000541661 F8VP50 259 aa13.95□□□□□ -0.18
SCARB1-207ENST00000541661 SGK1O00141 431 aa13.95□□□□□ -0.18
SCARB1-207ENST00000541661 KAT7O95251 611 aa13.95□□□□□ -0.18
SCARB1-207ENST00000541661 APODP05090 189 aa13.95□□□□□ -0.18
SCARB1-207ENST00000541661 GNL1P36915 607 aaPredicted RBP13.95□□□□□ -0.18
SCARB1-207ENST00000541661 DPP6P42658 865 aa13.95□□□□□ -0.18
SCARB1-207ENST00000541661 TNFRSF4P43489 277 aa13.95□□□□□ -0.18
SCARB1-207ENST00000541661 KIR2DL1P43626 348 aaPredicted RBP13.95□□□□□ -0.18
SCARB1-207ENST00000541661 MESP2Q0VG99 397 aa13.95□□□□□ -0.18
SCARB1-207ENST00000541661 LMAN2Q12907 356 aa13.95□□□□□ -0.18
SCARB1-207ENST00000541661 EOGTQ5NDL2 527 aa13.95□□□□□ -0.18
SCARB1-207ENST00000541661 LPCAT2Q7L5N7 544 aa13.95□□□□□ -0.18
SCARB1-207ENST00000541661 TRAPPC11Q7Z392 1133 aa13.95□□□□□ -0.18
SCARB1-207ENST00000541661 DDX42Q86XP3 938 aaKnown RBP eCLIP13.95□□□□□ -0.18
SCARB1-207ENST00000541661 CBWD2Q8IUF1 395 aa13.95□□□□□ -0.18
SCARB1-207ENST00000541661 SYT12Q8IV01 421 aa13.95□□□□□ -0.18
SCARB1-207ENST00000541661 SFTPA1Q8IWL2 248 aa13.95□□□□□ -0.18
SCARB1-207ENST00000541661 TXNDC5Q8NBS9 432 aaKnown RBP13.95□□□□□ -0.18
SCARB1-207ENST00000541661 WHAMMQ8TF30 809 aa13.95□□□□□ -0.18
SCARB1-207ENST00000541661 PIGKQ92643 395 aa13.95□□□□□ -0.18
SCARB1-207ENST00000541661 ADAM33Q9BZ11 813 aa13.95□□□□□ -0.18
SCARB1-207ENST00000541661 KIAA1586Q9HCI6 787 aa13.95□□□□□ -0.18
SCARB1-207ENST00000541661 POLMQ9NP87 494 aaPredicted RBP13.95□□□□□ -0.18
SCARB1-207ENST00000541661 TBC1D14Q9P2M4 693 aa13.95□□□□□ -0.18
SCARB1-207ENST00000541661 RALYQ9UKM9 306 aaKnown RBP13.95□□□□□ -0.18
SCARB1-207ENST00000541661 NME7Q9Y5B8 376 aa13.95□□□□□ -0.18
SCARB1-207ENST00000541661 CEP192Q8TEP8 1941 aa13.95□□□□□ -0.18
SCARB1-207ENST00000541661 ASCC3Q8N3C0 2202 aaKnown RBP13.95□□□□□ -0.18
SCARB1-207ENST00000541661 PI4KAP42356 2102 aa13.94□□□□□ -0.18
SCARB1-207ENST00000541661 FAM208BQ5VWN6 2430 aa13.94□□□□□ -0.18
SCARB1-207ENST00000541661 A0A087X0B3 334 aa13.94□□□□□ -0.18
SCARB1-207ENST00000541661 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.94□□□□□ -0.18
SCARB1-207ENST00000541661 ADAM23O75077 832 aa13.94□□□□□ -0.18
SCARB1-207ENST00000541661 KLF8O95600 359 aaPredicted RBP13.94□□□□□ -0.18
SCARB1-207ENST00000541661 TOP3BO95985 862 aaKnown RBP13.94□□□□□ -0.18
SCARB1-207ENST00000541661 ADH1CP00326 375 aa13.94□□□□□ -0.18
SCARB1-207ENST00000541661 CST3P01034 146 aaPredicted RBP13.94□□□□□ -0.18
SCARB1-207ENST00000541661 PTPN1P18031 435 aaKnown RBP13.94□□□□□ -0.18
SCARB1-207ENST00000541661 HOXD13P35453 343 aa13.94□□□□□ -0.18
SCARB1-207ENST00000541661 TIE1P35590 1138 aa13.94□□□□□ -0.18
SCARB1-207ENST00000541661 STAT6P42226 847 aa13.94□□□□□ -0.18
SCARB1-207ENST00000541661 GRIA2P42262 883 aa13.94□□□□□ -0.18
SCARB1-207ENST00000541661 TAF10Q12962 218 aa13.94□□□□□ -0.18
SCARB1-207ENST00000541661 RESTQ13127 1097 aa13.94□□□□□ -0.18
SCARB1-207ENST00000541661 BYSLQ13895 437 aaKnown RBP13.94□□□□□ -0.18
SCARB1-207ENST00000541661 MAP7D1Q3KQU3 841 aa13.94□□□□□ -0.18
SCARB1-207ENST00000541661 TRIM61Q5EBN2 209 aa13.94□□□□□ -0.18
SCARB1-207ENST00000541661 MDH1BQ5I0G3 518 aa13.94□□□□□ -0.18
SCARB1-207ENST00000541661 EMC10Q5UCC4 262 aa13.94□□□□□ -0.18
SCARB1-207ENST00000541661 PEAR1Q5VY43 1037 aaPredicted RBP13.94□□□□□ -0.18
SCARB1-207ENST00000541661 TDRD10Q5VZ19 366 aaKnown RBP13.94□□□□□ -0.18
SCARB1-207ENST00000541661 SLC23A3Q6PIS1 610 aa13.94□□□□□ -0.18
SCARB1-207ENST00000541661 STXBP4Q6ZWJ1 553 aa13.94□□□□□ -0.18
SCARB1-207ENST00000541661 C12orf40Q86WS4 652 aa13.94□□□□□ -0.18
SCARB1-207ENST00000541661 CCDC65Q8IXS2 484 aa13.94□□□□□ -0.18
SCARB1-207ENST00000541661 PHTF2Q8N3S3 785 aa13.94□□□□□ -0.18
SCARB1-207ENST00000541661 GATA6Q92908 595 aa13.94□□□□□ -0.18
SCARB1-207ENST00000541661 OTUB2Q96DC9 234 aa13.94□□□□□ -0.18
SCARB1-207ENST00000541661 SPACA7Q96KW9 195 aa13.94□□□□□ -0.18
SCARB1-207ENST00000541661 SLITRK1Q96PX8 696 aa13.94□□□□□ -0.18
SCARB1-207ENST00000541661 MMS19Q96T76 1030 aa13.94□□□□□ -0.18
SCARB1-207ENST00000541661 DUSP9Q99956 384 aaKnown RBP13.94□□□□□ -0.18
SCARB1-207ENST00000541661 MRPL45Q9BRJ2 306 aaKnown RBP13.94□□□□□ -0.18
SCARB1-207ENST00000541661 SCNM1Q9BWG6 230 aa13.94□□□□□ -0.18
SCARB1-207ENST00000541661 NUSAP1Q9BXS6 441 aaKnown RBP13.94□□□□□ -0.18
SCARB1-207ENST00000541661 PANK2Q9BZ23 570 aa13.94□□□□□ -0.18
SCARB1-207ENST00000541661 SNX25Q9H3E2 840 aa13.94□□□□□ -0.18
SCARB1-207ENST00000541661 TMEM74BQ9NUR3 256 aa13.94□□□□□ -0.18
SCARB1-207ENST00000541661 TMEM30AQ9NV96 361 aa13.94□□□□□ -0.18
SCARB1-207ENST00000541661 HSPBP1Q9NZL4 362 aa13.94□□□□□ -0.18
SCARB1-207ENST00000541661 CFAP97Q9P2B7 532 aa13.94□□□□□ -0.18
SCARB1-207ENST00000541661 MBD1Q9UIS9 605 aaPredicted RBP13.94□□□□□ -0.18
SCARB1-207ENST00000541661 AKAP13Q12802 2813 aa13.94□□□□□ -0.18
SCARB1-207ENST00000541661 PCNX2A6NKB5 2137 aa13.93□□□□□ -0.18
SCARB1-207ENST00000541661 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.93□□□□□ -0.18
SCARB1-207ENST00000541661 E2F8A0AVK6 867 aa13.93□□□□□ -0.18
SCARB1-207ENST00000541661 VPS37CA5D8V6 355 aaPredicted RBP13.93□□□□□ -0.18
SCARB1-207ENST00000541661 UPK3BL1B0FP48 263 aa13.93□□□□□ -0.18
SCARB1-207ENST00000541661 UPK3BL2E5RIL1 263 aa13.93□□□□□ -0.18
SCARB1-207ENST00000541661 MAP3K13O43283 966 aa13.93□□□□□ -0.18
SCARB1-207ENST00000541661 STAU1O95793 577 aaKnown RBP13.93□□□□□ -0.18
SCARB1-207ENST00000541661 ADH5P11766 374 aa13.93□□□□□ -0.18
SCARB1-207ENST00000541661 SPINK2P20155 84 aa13.93□□□□□ -0.18
SCARB1-207ENST00000541661 PDCP20941 246 aa13.93□□□□□ -0.18
SCARB1-207ENST00000541661 HOXD12P35452 270 aa13.93□□□□□ -0.18
SCARB1-207ENST00000541661 PTGER3P43115 390 aa13.93□□□□□ -0.18
SCARB1-207ENST00000541661 CACNA2D1P54289 1103 aa13.93□□□□□ -0.18
SCARB1-207ENST00000541661 CUL4AQ13619 759 aa13.93□□□□□ -0.18
SCARB1-207ENST00000541661 UAP1L1Q3KQV9 507 aa13.93□□□□□ -0.18
SCARB1-207ENST00000541661 HS2ST1Q7LGA3 356 aa13.93□□□□□ -0.18
SCARB1-207ENST00000541661 PIP4P1Q86T03 277 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms