RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 PHC1P78364 1004 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 TAP1Q03518 808 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 RBL2Q08999 1139 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 C2orf54Q08AI8 447 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 NAB1Q13506 487 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 TRPC3Q13507 836 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 MORC3Q14149 939 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 SPARCL1Q14515 664 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 OXA1LQ15070 435 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 MTFR1Q15390 333 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 SPA17Q15506 151 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 GRIK5Q16478 980 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 ASIC2Q16515 512 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 TMEM95Q3KNT9 176 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 KCTD21Q4G0X4 260 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 SLC45A4Q5BKX6 768 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 TNFAIP8L3Q5GJ75 292 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 EARS2Q5JPH6 523 aaKnown RBP5.39□□□□□ -1.55
SNHG1-218ENST00000541615 CACHD1Q5VU97 1274 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 ARHGEF16Q5VV41 709 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 PLEKHA7Q6IQ23 1121 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 MACC1Q6ZN28 852 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 MFSD6Q6ZSS7 791 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 USP50Q70EL3 339 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-218ENST00000541615 HEATR3Q7Z4Q2 680 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 TXNDC2Q86VQ3 553 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 DNAAF5Q86Y56 855 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 PDSS2Q86YH6 399 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 HPS6Q86YV9 775 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 SIRT2Q8IXJ6 389 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 GSPT2Q8IYD1 628 aaKnown RBP5.39□□□□□ -1.55
SNHG1-218ENST00000541615 FITM2Q8N6M3 262 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 NKAIN3Q8N8D7 197 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 ZNF565Q8N9K5 539 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 SLC4A11Q8NBS3 891 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 ZNF680Q8NEM1 530 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 OR8H1Q8NGG4 311 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 OR6Y1Q8NGX8 325 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 NCOA7Q8NI08 942 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 RAB3IL1Q8TBN0 382 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 MCOLN3Q8TDD5 553 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 S100ZQ8WXG8 99 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 JADE3Q92613 823 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 UTP4Q969X6 686 aaKnown RBP5.39□□□□□ -1.55
SNHG1-218ENST00000541615 MCUR1Q96AQ8 359 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 TAMM41Q96BW9 452 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 TXNDC15Q96J42 360 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 DNAJC1Q96KC8 554 aaKnown RBP5.39□□□□□ -1.55
SNHG1-218ENST00000541615 CAPZA3Q96KX2 299 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 HS6ST2Q96MM7 605 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 RUNDC3BQ96NL0 473 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 SERINC2Q96SA4 455 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 NUP88Q99567 741 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-218ENST00000541615 C17orf62Q9BQA9 187 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 BTBD10Q9BSF8 475 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 BTBD2Q9BX70 525 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 WDR12Q9GZL7 423 aaKnown RBP5.39□□□□□ -1.55
SNHG1-218ENST00000541615 HOXD1Q9GZZ0 328 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 HSD3B7Q9H2F3 369 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 GGNBP2Q9H3C7 697 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 HIPK3Q9H422 1215 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 TMEM206Q9H813 350 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 NTN4Q9HB63 628 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 CPNE5Q9HCH3 593 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 MAN1C1Q9NR34 630 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 IARS2Q9NSE4 1012 aaKnown RBP5.39□□□□□ -1.55
SNHG1-218ENST00000541615 ABHD10Q9NUJ1 306 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 GIMAP4Q9NUV9 329 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 PARVAQ9NVD7 372 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 POLR3EQ9NVU0 708 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 CUEDC1Q9NWM3 386 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-218ENST00000541615 GPRC5DQ9NZD1 345 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 GPRC5BQ9NZH0 403 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 TRPM5Q9NZQ8 1165 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 HMG20BQ9P0W2 317 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 FAM8A1Q9UBU6 413 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 APEX2Q9UBZ4 518 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 MALT1Q9UDY8 824 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 VPS51Q9UID3 782 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 CPSF3Q9UKF6 684 aaKnown RBP5.39□□□□□ -1.55
SNHG1-218ENST00000541615 AGTPBP1Q9UPW5 1226 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 MED16Q9Y2X0 877 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 DTNAQ9Y4J8 743 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 FLT1P17948 1338 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 ADGRA3Q8IWK6 1321 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 PCDH11YQ9BZA8 1340 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 MYO5CQ9NQX4 1742 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 RTL9Q8NET4 1388 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 ZFYVE9O95405 1425 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 PRAG1Q86YV5 1406 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 GRIN2BQ13224 1484 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 ABCC10Q5T3U5 1492 aa5.39□□□□□ -1.55
SNHG1-218ENST00000541615 PPRC1Q5VV67 1664 aaKnown RBP5.38□□□□□ -1.55
SNHG1-218ENST00000541615 A0A1B0GWJ7 208 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 LRRIQ4A6NIV6 560 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 A8MVJ9 347 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 BTBD18B2RXH4 712 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 KCNN4O15554 427 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 ZBTB24O43167 697 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-218ENST00000541615 PI15O43692 258 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms