RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 HSFY1Q96LI6 401 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 B3GNT5Q9BYG0 378 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 CXorf56Q9H5V9 222 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 USTQ9Y2C2 406 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 PCDHA3Q9Y5H8 950 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 ABHD14A-ACY1A0A1B0GW23 586 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 CAPN15O75808 1086 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 FAM200BP0CF97 657 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 PYGMP11217 842 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 CORO7P57737 925 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 TAS2R40P59535 323 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 TSPY1Q01534 308 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 PIGHQ14442 188 aaPredicted RBP9.12□□□□□ -0.95
THBS3-210ENST00000541576 MAP9Q49MG5 647 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 MFSD5Q6N075 450 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 FAM35AQ86V20 835 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 ZDHHC17Q8IUH5 632 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 MMGT1Q8N4V1 131 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 TMEM199Q8N511 208 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 FNIP1Q8TF40 1166 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.12□□□□□ -0.95
THBS3-210ENST00000541576 TMEM175Q9BSA9 504 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 COLEC11Q9BWP8 271 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 CYLDQ9NQC7 956 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 KRT82Q9NSB4 513 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 HCSTQ9UBK5 93 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 TMEM59LQ9UK28 342 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 ADAM28Q9UKQ2 775 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 NR2E1Q9Y466 385 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 F8VP50 259 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 PGRMC1O00264 195 aaKnown RBP9.12□□□□□ -0.95
THBS3-210ENST00000541576 ATP8B1O43520 1251 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 TCF4P15884 667 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 PSMA2P25787 234 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 GGCXP38435 758 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 SSR1P43307 286 aaKnown RBP9.12□□□□□ -0.95
THBS3-210ENST00000541576 ACADSBP45954 432 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 RPL34P49207 117 aaKnown RBP9.12□□□□□ -0.95
THBS3-210ENST00000541576 SLC11A1P49279 550 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 RWDD2BP57060 319 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 CLEC20AQ6ZU45 233 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 PIGZQ86VD9 579 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 CEP57Q86XR8 500 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 SCUBE3Q8IX30 993 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 EMC1Q8N766 993 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 OR10T2Q8NGX3 314 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 HDAC7Q8WUI4 952 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 MYLPFQ96A32 169 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 RNPC3Q96LT9 517 aaKnown RBP9.12□□□□□ -0.95
THBS3-210ENST00000541576 AP1M1Q9BXS5 423 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 UBXN6Q9BZV1 441 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.12□□□□□ -0.95
THBS3-210ENST00000541576 FNDC1Q4ZHG4 1894 aaPredicted RBP9.12□□□□□ -0.95
THBS3-210ENST00000541576 EBAG9O00559 213 aa9.11□□□□□ -0.95
THBS3-210ENST00000541576 SYN3O14994 580 aa9.11□□□□□ -0.95
THBS3-210ENST00000541576 PAPSS1O43252 624 aaPredicted RBP9.11□□□□□ -0.95
THBS3-210ENST00000541576 FGGP02679 453 aa9.11□□□□□ -0.95
THBS3-210ENST00000541576 EN2P19622 333 aaPredicted RBP9.11□□□□□ -0.95
THBS3-210ENST00000541576 BCAR1P56945 870 aa9.11□□□□□ -0.95
THBS3-210ENST00000541576 SLC6A3Q01959 620 aa9.11□□□□□ -0.95
THBS3-210ENST00000541576 FAM171BQ6P995 826 aa9.11□□□□□ -0.95
THBS3-210ENST00000541576 OLFML1Q6UWY5 402 aa9.11□□□□□ -0.95
THBS3-210ENST00000541576 CCDC91Q7Z6B0 441 aa9.11□□□□□ -0.95
THBS3-210ENST00000541576 RHOT1Q8IXI2 618 aa9.11□□□□□ -0.95
THBS3-210ENST00000541576 NIPA2Q8N8Q9 360 aa9.11□□□□□ -0.95
THBS3-210ENST00000541576 PIWIL1Q96J94 861 aaKnown RBP9.11□□□□□ -0.95
THBS3-210ENST00000541576 LRRC1Q9BTT6 524 aa9.11□□□□□ -0.95
THBS3-210ENST00000541576 MAP2K7O14733 419 aa9.11□□□□□ -0.95
THBS3-210ENST00000541576 PSTPIP1O43586 416 aa9.11□□□□□ -0.95
THBS3-210ENST00000541576 AP1G2O75843 785 aa9.11□□□□□ -0.95
THBS3-210ENST00000541576 DGKIO75912 1065 aa9.11□□□□□ -0.95
THBS3-210ENST00000541576 BEST1O76090 585 aa9.11□□□□□ -0.95
THBS3-210ENST00000541576 OAZ2O95190 189 aa9.11□□□□□ -0.95
THBS3-210ENST00000541576 AMHP03971 560 aa9.11□□□□□ -0.95
THBS3-210ENST00000541576 GALTP07902 379 aa9.11□□□□□ -0.95
THBS3-210ENST00000541576 LCP1P13796 627 aa9.11□□□□□ -0.95
THBS3-210ENST00000541576 MAP3K7CLP57077 242 aa9.11□□□□□ -0.95
THBS3-210ENST00000541576 LLGL1Q15334 1064 aa9.11□□□□□ -0.95
THBS3-210ENST00000541576 MAPRE1Q15691 268 aaKnown RBP9.11□□□□□ -0.95
THBS3-210ENST00000541576 SEL1L2Q5TEA6 688 aa9.11□□□□□ -0.95
THBS3-210ENST00000541576 SMARCD1Q96GM5 515 aa9.11□□□□□ -0.95
THBS3-210ENST00000541576 ACBD3Q9H3P7 528 aa9.11□□□□□ -0.95
THBS3-210ENST00000541576 SLC24A3Q9HC58 644 aa9.11□□□□□ -0.95
THBS3-210ENST00000541576 MARCH5Q9NX47 278 aa9.11□□□□□ -0.95
THBS3-210ENST00000541576 TTC7AQ9ULT0 858 aaPredicted RBP9.11□□□□□ -0.95
THBS3-210ENST00000541576 FAM169AQ9Y6X4 670 aa9.11□□□□□ -0.95
THBS3-210ENST00000541576 SF3B1O75533 1304 aaKnown RBP eCLIP9.11□□□□□ -0.95
THBS3-210ENST00000541576 EFCAB14O75071 495 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 GRAP2O75791 330 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 ACTN3Q08043 901 aaPredicted RBP9.1□□□□□ -0.95
THBS3-210ENST00000541576 TAF5Q15542 800 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 FAM171A1Q5VUB5 890 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 ADAT2Q7Z6V5 191 aaKnown RBP9.1□□□□□ -0.95
THBS3-210ENST00000541576 UBE2Q1Q7Z7E8 422 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 ZDHHC14Q8IZN3 488 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 ARFGAP1Q8N6T3 406 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 TOP1MTQ969P6 601 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 TMEM209Q96SK2 561 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 NAP1L3Q99457 506 aaPredicted RBP9.1□□□□□ -0.95
THBS3-210ENST00000541576 PKMYT1Q99640 499 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms