RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 EMC2Q15006 297 aa15.48■□□□□ 0.07
SMARCA4-207ENST00000541122 PLEKHM3Q6ZWE6 761 aa15.48■□□□□ 0.07
SMARCA4-207ENST00000541122 LRRC8DQ7L1W4 858 aa15.48■□□□□ 0.07
SMARCA4-207ENST00000541122 CLVS1Q8IUQ0 354 aaPredicted RBP15.48■□□□□ 0.07
SMARCA4-207ENST00000541122 FAM9CQ8IZT9 166 aa15.48■□□□□ 0.07
SMARCA4-207ENST00000541122 HIST1H2AHQ96KK5 128 aa15.48■□□□□ 0.07
SMARCA4-207ENST00000541122 HIST1H2AJQ99878 128 aa15.48■□□□□ 0.07
SMARCA4-207ENST00000541122 MXRA8Q9BRK3 442 aa15.48■□□□□ 0.07
SMARCA4-207ENST00000541122 H2AFJQ9BTM1 129 aa15.48■□□□□ 0.07
SMARCA4-207ENST00000541122 UBE2OQ9C0C9 1292 aaKnown RBP15.48■□□□□ 0.07
SMARCA4-207ENST00000541122 TBX20Q9UMR3 447 aa15.48■□□□□ 0.07
SMARCA4-207ENST00000541122 OVOS2A0A0J9YW53 1432 aa15.48■□□□□ 0.07
SMARCA4-207ENST00000541122 OVOS2Q6IE36 1432 aa15.48■□□□□ 0.07
SMARCA4-207ENST00000541122 RGS7P49802 495 aa15.48■□□□□ 0.07
SMARCA4-207ENST00000541122 PURAQ00577 322 aaKnown RBP15.48■□□□□ 0.07
SMARCA4-207ENST00000541122 CLEC16AQ2KHT3 1053 aa15.48■□□□□ 0.07
SMARCA4-207ENST00000541122 XRRA1Q6P2D8 792 aa15.48■□□□□ 0.07
SMARCA4-207ENST00000541122 SH3RF1Q7Z6J0 888 aa15.48■□□□□ 0.07
SMARCA4-207ENST00000541122 SCN4BQ8IWT1 228 aa15.48■□□□□ 0.07
SMARCA4-207ENST00000541122 VPS37AQ8NEZ2 397 aa15.48■□□□□ 0.07
SMARCA4-207ENST00000541122 IMPAD1Q9NX62 359 aa15.48■□□□□ 0.07
SMARCA4-207ENST00000541122 NCKIPSDQ9NZQ3 722 aa15.48■□□□□ 0.07
SMARCA4-207ENST00000541122 CHORDC1Q9UHD1 332 aaPredicted RBP15.48■□□□□ 0.07
SMARCA4-207ENST00000541122 NRXN1Q9ULB1 1477 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 KDM6AO15550 1401 aaPredicted RBP15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 TBKBP1A7MCY6 615 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 ILF2Q12905 390 aaKnown RBP15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 PRKAA1Q13131 559 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 ATP1A4Q13733 1029 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 GIT2Q14161 759 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 PARP6Q2NL67 630 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 KIAA1841Q6NSI8 718 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 SVOPQ8N4V2 548 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 TSPOAP1O95153 1857 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 CEMIPQ8WUJ3 1361 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 CFAP99D6REC4 459 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 MAFGO15525 162 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 MPOP05164 745 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 ME2P23368 584 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 RGS4P49798 205 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 DRG2P55039 364 aaKnown RBP15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 SF3B3Q15393 1217 aaKnown RBP15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 ILDR1Q86SU0 546 aaPredicted RBP15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 DUSP9Q99956 384 aaKnown RBP15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 LRMDAQ9H2I8 198 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 CD274Q9NZQ7 290 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 PDZK1P1A8MUH7 402 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 STAT5BP51692 787 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 XIAPP98170 497 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 TTC27Q6P3X3 843 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 GORASP1Q9BQQ3 440 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 MMTAG2Q9BU76 263 aaKnown RBP15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 HMG20AQ9NP66 347 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 LRRC4BQ9NT99 713 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 AK9Q5TCS8 1911 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 E9PBE3 544 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 RNF103O00237 685 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 KLHL41O60662 606 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 APBA3O96018 575 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 CDC42EP1Q00587 391 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 TBCELQ5QJ74 424 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 TSHZ1Q6ZSZ6 1077 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 ERO1BQ86YB8 467 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 ZCCHC9Q8N567 271 aaKnown RBP15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 VPS33AQ96AX1 596 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 C1orf50Q9BV19 199 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 RUSC1Q9BVN2 902 aa15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 MRPS26Q9BYN8 205 aaKnown RBP15.47■□□□□ 0.07
SMARCA4-207ENST00000541122 NDUFB10O96000 172 aa15.46■□□□□ 0.07
SMARCA4-207ENST00000541122 RPL5P46777 297 aaKnown RBP15.46■□□□□ 0.07
SMARCA4-207ENST00000541122 KIZQ2M2Z5 673 aa15.46■□□□□ 0.07
SMARCA4-207ENST00000541122 TWF2Q6IBS0 349 aaKnown RBP15.46■□□□□ 0.07
SMARCA4-207ENST00000541122 RTKN2Q8IZC4 609 aa15.46■□□□□ 0.07
SMARCA4-207ENST00000541122 TDRD3Q9H7E2 651 aaKnown RBP15.46■□□□□ 0.07
SMARCA4-207ENST00000541122 CATSPERBQ9H7T0 1116 aa15.46■□□□□ 0.07
SMARCA4-207ENST00000541122 FAM196BA6NMK8 535 aa15.46■□□□□ 0.07
SMARCA4-207ENST00000541122 MOCS2O96007 188 aaPredicted RBP15.46■□□□□ 0.07
SMARCA4-207ENST00000541122 SLC1A6P48664 564 aa15.46■□□□□ 0.07
SMARCA4-207ENST00000541122 NAB1Q13506 487 aa15.46■□□□□ 0.07
SMARCA4-207ENST00000541122 LAMC2Q13753 1193 aa15.46■□□□□ 0.07
SMARCA4-207ENST00000541122 EPC2Q52LR7 807 aa15.46■□□□□ 0.07
SMARCA4-207ENST00000541122 TRPC4APQ8TEL6 797 aa15.46■□□□□ 0.07
SMARCA4-207ENST00000541122 ASIC4Q96FT7 647 aa15.46■□□□□ 0.07
SMARCA4-207ENST00000541122 EIF3LQ9Y262 564 aaKnown RBP15.46■□□□□ 0.07
SMARCA4-207ENST00000541122 DYTNA2CJ06 578 aa15.46■□□□□ 0.07
SMARCA4-207ENST00000541122 PDE2AO00408 941 aaPredicted RBP15.46■□□□□ 0.07
SMARCA4-207ENST00000541122 MAGEB2O15479 319 aa15.46■□□□□ 0.07
SMARCA4-207ENST00000541122 PHGDHO43175 533 aaKnown RBP15.46■□□□□ 0.07
SMARCA4-207ENST00000541122 WBP4O75554 376 aaKnown RBP15.46■□□□□ 0.07
SMARCA4-207ENST00000541122 TOMM70O94826 608 aa15.46■□□□□ 0.07
SMARCA4-207ENST00000541122 RBP1P09455 135 aa15.46■□□□□ 0.07
SMARCA4-207ENST00000541122 C1QBPQ07021 282 aaKnown RBP15.46■□□□□ 0.07
SMARCA4-207ENST00000541122 MTM1Q13496 603 aa15.46■□□□□ 0.07
SMARCA4-207ENST00000541122 SNX17Q15036 470 aa15.46■□□□□ 0.07
SMARCA4-207ENST00000541122 SEC23AQ15436 765 aa15.46■□□□□ 0.07
SMARCA4-207ENST00000541122 Q3C1V9 767 aa15.46■□□□□ 0.07
SMARCA4-207ENST00000541122 KIAA0895Q8NCT3 520 aa15.46■□□□□ 0.07
SMARCA4-207ENST00000541122 PHF21AQ96BD5 680 aa15.46■□□□□ 0.07
SMARCA4-207ENST00000541122 PLEKHA8Q96JA3 519 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms