RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 DPCDQ9BVM2 203 aaPredicted RBP7.34□□□□□ -1.23
YBX3-210ENST00000540975 FSD1LQ9BXM9 530 aa7.34□□□□□ -1.23
YBX3-210ENST00000540975 ITGB1BP2Q9UKP3 347 aa7.34□□□□□ -1.23
YBX3-210ENST00000540975 F8W8V4 182 aa7.33□□□□□ -1.24
YBX3-210ENST00000540975 RRP9O43818 475 aaKnown RBP7.33□□□□□ -1.24
YBX3-210ENST00000540975 JTBO76095 146 aa7.33□□□□□ -1.24
YBX3-210ENST00000540975 TJP3O95049 919 aa7.33□□□□□ -1.24
YBX3-210ENST00000540975 CACHD1Q5VU97 1274 aa7.33□□□□□ -1.24
YBX3-210ENST00000540975 FCRLBQ6BAA4 426 aa7.33□□□□□ -1.24
YBX3-210ENST00000540975 FCRL6Q6DN72 434 aa7.33□□□□□ -1.24
YBX3-210ENST00000540975 SLC29A4Q7RTT9 530 aa7.33□□□□□ -1.24
YBX3-210ENST00000540975 REPS1Q96D71 796 aa7.33□□□□□ -1.24
YBX3-210ENST00000540975 MID2Q9UJV3 735 aa7.33□□□□□ -1.24
YBX3-210ENST00000540975 RAB27BO00194 218 aa7.32□□□□□ -1.24
YBX3-210ENST00000540975 PQBP1O60828 265 aaKnown RBP7.32□□□□□ -1.24
YBX3-210ENST00000540975 SRGAP2O75044 1071 aa7.32□□□□□ -1.24
YBX3-210ENST00000540975 MT-ND5P03915 603 aa7.32□□□□□ -1.24
YBX3-210ENST00000540975 PRKCBP05771 671 aa7.32□□□□□ -1.24
YBX3-210ENST00000540975 DLDP09622 509 aaKnown RBP7.32□□□□□ -1.24
YBX3-210ENST00000540975 CTGFP29279 349 aa7.32□□□□□ -1.24
YBX3-210ENST00000540975 UQCRC1P31930 480 aa7.32□□□□□ -1.24
YBX3-210ENST00000540975 ZNF750Q32MQ0 723 aa7.32□□□□□ -1.24
YBX3-210ENST00000540975 YAF2Q8IY57 180 aa7.32□□□□□ -1.24
YBX3-210ENST00000540975 ABHD11Q8NFV4 315 aa7.32□□□□□ -1.24
YBX3-210ENST00000540975 LENG8Q96PV6 779 aaPredicted RBP7.32□□□□□ -1.24
YBX3-210ENST00000540975 UNKQ9C0B0 810 aaKnown RBP7.32□□□□□ -1.24
YBX3-210ENST00000540975 DKK4Q9UBT3 224 aa7.32□□□□□ -1.24
YBX3-210ENST00000540975 SERGEFQ9UGK8 458 aa7.32□□□□□ -1.24
YBX3-210ENST00000540975 ADAMTS5Q9UNA0 930 aa7.32□□□□□ -1.24
YBX3-210ENST00000540975 USP22Q9UPT9 525 aa7.32□□□□□ -1.24
YBX3-210ENST00000540975 DRG1Q9Y295 367 aaKnown RBP7.32□□□□□ -1.24
YBX3-210ENST00000540975 SNX13Q9Y5W8 968 aa7.32□□□□□ -1.24
YBX3-210ENST00000540975 NPSP0C0P6 89 aa7.31□□□□□ -1.24
YBX3-210ENST00000540975 ACVR2AP27037 513 aa7.31□□□□□ -1.24
YBX3-210ENST00000540975 PIK3CBP42338 1070 aa7.31□□□□□ -1.24
YBX3-210ENST00000540975 CPT1AP50416 773 aa7.31□□□□□ -1.24
YBX3-210ENST00000540975 ITGA8P53708 1063 aa7.31□□□□□ -1.24
YBX3-210ENST00000540975 TPTEP56180 551 aa7.31□□□□□ -1.24
YBX3-210ENST00000540975 CYP4F2P78329 520 aa7.31□□□□□ -1.24
YBX3-210ENST00000540975 HTRA4P83105 476 aaPredicted RBP7.31□□□□□ -1.24
YBX3-210ENST00000540975 TFF2Q03403 129 aa7.31□□□□□ -1.24
YBX3-210ENST00000540975 CYP1B1Q16678 543 aa7.31□□□□□ -1.24
YBX3-210ENST00000540975 COBLL1Q53SF7 1204 aa7.31□□□□□ -1.24
YBX3-210ENST00000540975 COLEC12Q5KU26 742 aa7.31□□□□□ -1.24
YBX3-210ENST00000540975 MTHFD1LQ6UB35 978 aa7.31□□□□□ -1.24
YBX3-210ENST00000540975 ZNF804AQ7Z570 1209 aa7.31□□□□□ -1.24
YBX3-210ENST00000540975 SDR16C5Q8N3Y7 309 aa7.31□□□□□ -1.24
YBX3-210ENST00000540975 ZBTB45Q96K62 511 aaPredicted RBP7.31□□□□□ -1.24
YBX3-210ENST00000540975 THAP7Q9BT49 309 aaPredicted RBP7.31□□□□□ -1.24
YBX3-210ENST00000540975 SARGQ9BW04 601 aa7.31□□□□□ -1.24
YBX3-210ENST00000540975 RHPN2P1A8MT19 583 aa7.3□□□□□ -1.24
YBX3-210ENST00000540975 AP4M1O00189 453 aa7.3□□□□□ -1.24
YBX3-210ENST00000540975 CD3EAPO15446 510 aaKnown RBP7.3□□□□□ -1.24
YBX3-210ENST00000540975 ZNF37AP17032 561 aaPredicted RBP7.3□□□□□ -1.24
YBX3-210ENST00000540975 TPH1P17752 444 aa7.3□□□□□ -1.24
YBX3-210ENST00000540975 EPHA3P29320 983 aa7.3□□□□□ -1.24
YBX3-210ENST00000540975 CARSP49589 748 aaKnown RBP7.3□□□□□ -1.24
YBX3-210ENST00000540975 MRPS21P82921 87 aaKnown RBP7.3□□□□□ -1.24
YBX3-210ENST00000540975 HOXA4Q00056 320 aaPredicted RBP7.3□□□□□ -1.24
YBX3-210ENST00000540975 PLAG1Q6DJT9 500 aa7.3□□□□□ -1.24
YBX3-210ENST00000540975 SUMO4Q6EEV6 95 aa7.3□□□□□ -1.24
YBX3-210ENST00000540975 NAPRTQ6XQN6 538 aa7.3□□□□□ -1.24
YBX3-210ENST00000540975 RAB11FIP4Q86YS3 637 aa7.3□□□□□ -1.24
YBX3-210ENST00000540975 HASPINQ8TF76 798 aa7.3□□□□□ -1.24
YBX3-210ENST00000540975 IPCEF1Q8WWN9 437 aaPredicted RBP7.3□□□□□ -1.24
YBX3-210ENST00000540975 SNX22Q96L94 193 aa7.3□□□□□ -1.24
YBX3-210ENST00000540975 BRIP1Q9BX63 1249 aa7.3□□□□□ -1.24
YBX3-210ENST00000540975 ADARB2Q9NS39 739 aaKnown RBP7.3□□□□□ -1.24
YBX3-210ENST00000540975 GEMIN8Q9NWZ8 242 aaKnown RBP7.3□□□□□ -1.24
YBX3-210ENST00000540975 SH3BP4Q9P0V3 963 aa7.3□□□□□ -1.24
YBX3-210ENST00000540975 CAPN11Q9UMQ6 739 aa7.3□□□□□ -1.24
YBX3-210ENST00000540975 FAM50BQ9Y247 325 aa7.3□□□□□ -1.24
YBX3-210ENST00000540975 MANSC4A6NHS7 340 aaPredicted RBP7.29□□□□□ -1.24
YBX3-210ENST00000540975 PSMD9O00233 223 aa7.29□□□□□ -1.24
YBX3-210ENST00000540975 FOXN3O00409 490 aaPredicted RBP7.29□□□□□ -1.24
YBX3-210ENST00000540975 PIAS2O75928 621 aa7.29□□□□□ -1.24
YBX3-210ENST00000540975 INMTO95050 263 aa7.29□□□□□ -1.24
YBX3-210ENST00000540975 PDE8BO95263 885 aa7.29□□□□□ -1.24
YBX3-210ENST00000540975 IL1R2P27930 398 aa7.29□□□□□ -1.24
YBX3-210ENST00000540975 TIRAPP58753 221 aa7.29□□□□□ -1.24
YBX3-210ENST00000540975 E2F1Q01094 437 aa7.29□□□□□ -1.24
YBX3-210ENST00000540975 L1TD1Q5T7N2 865 aaKnown RBP7.29□□□□□ -1.24
YBX3-210ENST00000540975 PTF1AQ7RTS3 328 aa7.29□□□□□ -1.24
YBX3-210ENST00000540975 SEMA6DQ8NFY4 1073 aa7.29□□□□□ -1.24
YBX3-210ENST00000540975 DPF1Q92782 380 aa7.29□□□□□ -1.24
YBX3-210ENST00000540975 PRR25Q96S07 402 aa7.29□□□□□ -1.24
YBX3-210ENST00000540975 MACROD1Q9BQ69 325 aa7.29□□□□□ -1.24
YBX3-210ENST00000540975 FAM83DQ9H4H8 585 aa7.29□□□□□ -1.24
YBX3-210ENST00000540975 CORO2BQ9UQ03 480 aa7.29□□□□□ -1.24
YBX3-210ENST00000540975 PCSK5Q92824 1860 aa7.29□□□□□ -1.24
YBX3-210ENST00000540975 WIPF3A6NGB9 483 aa7.28□□□□□ -1.24
YBX3-210ENST00000540975 PMPCBO75439 489 aa7.28□□□□□ -1.24
YBX3-210ENST00000540975 IL18RAPO95256 599 aa7.28□□□□□ -1.24
YBX3-210ENST00000540975 PRKCGP05129 697 aa7.28□□□□□ -1.24
YBX3-210ENST00000540975 HGFP14210 728 aa7.28□□□□□ -1.24
YBX3-210ENST00000540975 TRIM27P14373 513 aa7.28□□□□□ -1.24
YBX3-210ENST00000540975 GKP32189 559 aa7.28□□□□□ -1.24
YBX3-210ENST00000540975 GATMP50440 423 aa7.28□□□□□ -1.24
YBX3-210ENST00000540975 TIAL1Q01085 375 aaKnown RBP eCLIP7.28□□□□□ -1.24
YBX3-210ENST00000540975 DAG1Q14118 895 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 259.4 ms