RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	AGPAT3	Q9NRZ7	376 aa		5.94	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	NMRK1	Q9NWW6	199 aa		5.94	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	GNE	Q9Y223	722 aa	Known RBP	5.94	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	MAFB	Q9Y5Q3	323 aa	Predicted RBP	5.94	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	CFAP69	A5D8W1	941 aa		5.94	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	C2orf71	A6NGG8	1288 aa		5.94	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	FAM47DP	A6NHR8	397 aa		5.94	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	LIN7A	O14910	233 aa	Predicted RBP	5.94	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	EIF3D	O15371	548 aa	Known RBP eCLIP	5.94	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	BAIAP3	O94812	1187 aa		5.94	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	KRT19	P08727	400 aa		5.94	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	UBTFL6	P0CB48	400 aa	Predicted RBP	5.94	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	FGFR1	P11362	822 aa		5.94	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	COL6A1	P12109	1028 aa		5.94	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	ALDH7A1	P49419	539 aa	Known RBP	5.94	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	RPS6KA3	P51812	740 aa		5.94	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	CCNG1	P51959	295 aa		5.94	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	POU5F1B	Q06416	359 aa		5.94	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	LAMTOR4	Q0VGL1	99 aa		5.94	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	BTG3	Q14201	252 aa	Predicted RBP	5.94	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	RCN1	Q15293	331 aa		5.94	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	SLC1A5	Q15758	541 aa		5.94	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	TSHZ1	Q6ZSZ6	1077 aa		5.94	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	CCNJL	Q8IV13	435 aa		5.94	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	AGGF1	Q8N302	714 aa	eCLIP	5.94	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	TEX9	Q8N6V9	391 aa		5.94	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	SNF8	Q96H20	258 aa		5.94	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	PAK6	Q9NQU5	681 aa	Predicted RBP	5.94	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	USH1C	Q9Y6N9	552 aa		5.94	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	GOLGB1	Q14789	3259 aa	Known RBP	5.94	□□□□□ -1.46
RAPGEF4-215	ENST00000540783		A0A1W2PPM1	405 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	GTPBP10	A4D1E9	387 aa	Known RBP	5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	GOLGA8R	I6L899	631 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	NVL	O15381	856 aa	Known RBP	5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	ZSCAN5DP	P0CG00	497 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	CA4	P22748	312 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	IVD	P26440	423 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	FASTKD3	Q14CZ7	662 aa	Known RBP	5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	SKIV2L	Q15477	1246 aa	Known RBP	5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	TSNAXIP1	Q2TAA8	658 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	SNX30	Q5VWJ9	437 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	C11orf63	Q6NUN7	778 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	RHBDF2	Q6PJF5	856 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	THNSL1	Q8IYQ7	743 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	FIBCD1	Q8N539	461 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	XXYLT1	Q8NBI6	393 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	DHX38	Q92620	1227 aa	Known RBP	5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	PRR11	Q96HE9	360 aa	Predicted RBP	5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	SAMD11	Q96NU1	681 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	SLC9A7	Q96T83	725 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	OSMR	Q99650	979 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	MIPEP	Q99797	713 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	WNT8A	Q9H1J5	351 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	TMEM134	Q9H6X4	195 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	SLC28A3	Q9HAS3	691 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	SAYSD1	Q9NPB0	183 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	KLHL11	Q9NVR0	708 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	G3BP2	Q9UN86	482 aa	Known RBP	5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	FAM50B	Q9Y247	325 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	CNTNAP2	Q9UHC6	1331 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783		A0A0G2JND7	137 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	EXOC1L	A0A1B0GW35	172 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	SMAP	O00193	183 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	CDH16	O75309	829 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	BANF1	O75531	89 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	SLITRK3	O94933	977 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	ZCCHC18	P0CG32	403 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	ITIH2	P19823	946 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	RFX1	P22670	979 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	MRPS35	P82673	323 aa	Known RBP	5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	CREM	Q03060	361 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	TMEM62	Q0P6H9	643 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	TRIM32	Q13049	653 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	KPNB1	Q14974	876 aa	Known RBP	5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	PLEKHG4	Q58EX7	1191 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	FOXB2	Q5VYV0	432 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	ZPBP2	Q6X784	338 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	PPP1R21	Q6ZMI0	780 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	GSTA5	Q7RTV2	222 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	ZBTB33	Q86T24	672 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	NRG4	Q8WWG1	115 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	SCG3	Q8WXD2	468 aa	Known RBP	5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	CD101	Q93033	1021 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	TRIM4	Q9C037	500 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	TRABD	Q9H4I3	376 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	ZFP69B	Q9UJL9	534 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783		A0A087WZ62	844 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	GOLGA8S	H3BPF8	625 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	GOLGA8M	H3BSY2	632 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	TOM1L1	O75674	476 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	WFS1	O76024	890 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	VTN	P04004	478 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	MCF2	P10911	925 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	ALDH3A1	P30838	453 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	PIK3CA	P42336	1068 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	CPA2	P48052	419 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	BFSP1	Q12934	665 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	CYP1B1	Q16678	543 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	PARP6	Q2NL67	630 aa		5.93	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	ZFYVE27	Q5T4F4	411 aa		5.93	□□□□□ -1.46

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