RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 PDZD8Q8NEN9 1154 aa12.79□□□□□ -0.36
CBX3P4-202ENST00000540428 OR6B3Q8NGW1 331 aa12.79□□□□□ -0.36
CBX3P4-202ENST00000540428 OVCA2Q8WZ82 227 aa12.79□□□□□ -0.36
CBX3P4-202ENST00000540428 TCEAL3Q969E4 200 aa12.79□□□□□ -0.36
CBX3P4-202ENST00000540428 HPS3Q969F9 1004 aa12.79□□□□□ -0.36
CBX3P4-202ENST00000540428 RNF38Q9H0F5 515 aa12.79□□□□□ -0.36
CBX3P4-202ENST00000540428 MAGEF1Q9HAY2 307 aa12.79□□□□□ -0.36
CBX3P4-202ENST00000540428 CGNQ9P2M7 1197 aaKnown RBP12.79□□□□□ -0.36
CBX3P4-202ENST00000540428 NME7Q9Y5B8 376 aa12.79□□□□□ -0.36
CBX3P4-202ENST00000540428 CPQQ9Y646 472 aa12.79□□□□□ -0.36
CBX3P4-202ENST00000540428 KMT2BQ9UMN6 2715 aaPredicted RBP12.78□□□□□ -0.36
CBX3P4-202ENST00000540428 ZNF638Q14966 1978 aaKnown RBP12.78□□□□□ -0.36
CBX3P4-202ENST00000540428 A0A0A0MRY4 1105 aa12.78□□□□□ -0.36
CBX3P4-202ENST00000540428 STX6O43752 255 aa12.78□□□□□ -0.36
CBX3P4-202ENST00000540428 ALDH1A2O94788 518 aa12.78□□□□□ -0.36
CBX3P4-202ENST00000540428 SEC13P55735 322 aa12.78□□□□□ -0.36
CBX3P4-202ENST00000540428 EHHADHQ08426 723 aa12.78□□□□□ -0.36
CBX3P4-202ENST00000540428 C2orf27AQ580R0 203 aa12.78□□□□□ -0.36
CBX3P4-202ENST00000540428 DAB2IPQ5VWQ8 1189 aa12.78□□□□□ -0.36
CBX3P4-202ENST00000540428 UNC13DQ70J99 1090 aa12.78□□□□□ -0.36
CBX3P4-202ENST00000540428 C12orf56Q8IXR9 622 aa12.78□□□□□ -0.36
CBX3P4-202ENST00000540428 NUP93Q8N1F7 819 aa12.78□□□□□ -0.36
CBX3P4-202ENST00000540428 B3GALNT2Q8NCR0 500 aa12.78□□□□□ -0.36
CBX3P4-202ENST00000540428 MDGA1Q8NFP4 955 aa12.78□□□□□ -0.36
CBX3P4-202ENST00000540428 SYAP1Q96A49 352 aaPredicted RBP12.78□□□□□ -0.36
CBX3P4-202ENST00000540428 OTUB2Q96DC9 234 aa12.78□□□□□ -0.36
CBX3P4-202ENST00000540428 PNKPQ96T60 521 aa12.78□□□□□ -0.36
CBX3P4-202ENST00000540428 DUSP9Q99956 384 aaKnown RBP12.78□□□□□ -0.36
CBX3P4-202ENST00000540428 C7orf25Q9BPX7 421 aa12.78□□□□□ -0.36
CBX3P4-202ENST00000540428 VRTNQ9H8Y1 702 aa12.78□□□□□ -0.36
CBX3P4-202ENST00000540428 TBC1D14Q9P2M4 693 aa12.78□□□□□ -0.36
CBX3P4-202ENST00000540428 CNOT1A5YKK6 2376 aaKnown RBP12.78□□□□□ -0.36
CBX3P4-202ENST00000540428 E2F8A0AVK6 867 aa12.77□□□□□ -0.37
CBX3P4-202ENST00000540428 LNP1A1A4G5 178 aa12.77□□□□□ -0.37
CBX3P4-202ENST00000540428 A8MXQ7 604 aa12.77□□□□□ -0.37
CBX3P4-202ENST00000540428 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.77□□□□□ -0.37
CBX3P4-202ENST00000540428 KHNYNO15037 678 aaKnown RBP12.77□□□□□ -0.37
CBX3P4-202ENST00000540428 CUTAO60888 179 aa12.77□□□□□ -0.37
CBX3P4-202ENST00000540428 RTN3O95197 1032 aaPredicted RBP12.77□□□□□ -0.37
CBX3P4-202ENST00000540428 YEATS4O95619 227 aa12.77□□□□□ -0.37
CBX3P4-202ENST00000540428 ADH1CP00326 375 aa12.77□□□□□ -0.37
CBX3P4-202ENST00000540428 ABL1P00519 1130 aa12.77□□□□□ -0.37
CBX3P4-202ENST00000540428 APODP05090 189 aa12.77□□□□□ -0.37
CBX3P4-202ENST00000540428 MBL2P11226 248 aaPredicted RBP12.77□□□□□ -0.37
CBX3P4-202ENST00000540428 GRIA2P42262 883 aa12.77□□□□□ -0.37
CBX3P4-202ENST00000540428 TRPC3Q13507 836 aa12.77□□□□□ -0.37
CBX3P4-202ENST00000540428 BMT2Q1RMZ1 405 aa12.77□□□□□ -0.37
CBX3P4-202ENST00000540428 SNX30Q5VWJ9 437 aa12.77□□□□□ -0.37
CBX3P4-202ENST00000540428 ANO7Q6IWH7 933 aa12.77□□□□□ -0.37
CBX3P4-202ENST00000540428 RHBDF2Q6PJF5 856 aa12.77□□□□□ -0.37
CBX3P4-202ENST00000540428 CYP2U1Q7Z449 544 aa12.77□□□□□ -0.37
CBX3P4-202ENST00000540428 RDH13Q8NBN7 331 aa12.77□□□□□ -0.37
CBX3P4-202ENST00000540428 OLIG1Q8TAK6 271 aa12.77□□□□□ -0.37
CBX3P4-202ENST00000540428 SCFD1Q8WVM8 642 aa12.77□□□□□ -0.37
CBX3P4-202ENST00000540428 CCDC127Q96BQ5 260 aa12.77□□□□□ -0.37
CBX3P4-202ENST00000540428 DHX58Q96C10 678 aa12.77□□□□□ -0.37
CBX3P4-202ENST00000540428 ZNF396Q96N95 335 aaPredicted RBP12.77□□□□□ -0.37
CBX3P4-202ENST00000540428 TPSD1Q9BZJ3 242 aa12.77□□□□□ -0.37
CBX3P4-202ENST00000540428 ZNF518BQ9C0D4 1074 aa12.77□□□□□ -0.37
CBX3P4-202ENST00000540428 XYLT2Q9H1B5 865 aa12.77□□□□□ -0.37
CBX3P4-202ENST00000540428 DPEP3Q9H4B8 488 aa12.77□□□□□ -0.37
CBX3P4-202ENST00000540428 POLMQ9NP87 494 aaPredicted RBP12.77□□□□□ -0.37
CBX3P4-202ENST00000540428 TMEM30AQ9NV96 361 aa12.77□□□□□ -0.37
CBX3P4-202ENST00000540428 SMPD4Q9NXE4 827 aa12.77□□□□□ -0.37
CBX3P4-202ENST00000540428 CFAP97Q9P2B7 532 aa12.77□□□□□ -0.37
CBX3P4-202ENST00000540428 ATP8B3O60423 1300 aa12.77□□□□□ -0.37
CBX3P4-202ENST00000540428 ANAPC1Q9H1A4 1944 aa12.76□□□□□ -0.37
CBX3P4-202ENST00000540428 PVALEFA0A1B0GWK0 134 aa12.76□□□□□ -0.37
CBX3P4-202ENST00000540428 C4orf47A7E2U8 309 aa12.76□□□□□ -0.37
CBX3P4-202ENST00000540428 CLIC2O15247 247 aa12.76□□□□□ -0.37
CBX3P4-202ENST00000540428 KAT7O95251 611 aa12.76□□□□□ -0.37
CBX3P4-202ENST00000540428 CHRM1P11229 460 aaPredicted RBP12.76□□□□□ -0.37
CBX3P4-202ENST00000540428 YWHAQP27348 245 aa12.76□□□□□ -0.37
CBX3P4-202ENST00000540428 TNFRSF4P43489 277 aa12.76□□□□□ -0.37
CBX3P4-202ENST00000540428 TUBP50607 506 aa12.76□□□□□ -0.37
CBX3P4-202ENST00000540428 NOVA1P51513 510 aaKnown RBP12.76□□□□□ -0.37
CBX3P4-202ENST00000540428 CYP2J2P51589 502 aa12.76□□□□□ -0.37
CBX3P4-202ENST00000540428 AP3M2P53677 418 aa12.76□□□□□ -0.37
CBX3P4-202ENST00000540428 CACNA2D1P54289 1103 aa12.76□□□□□ -0.37
CBX3P4-202ENST00000540428 MYL6P60660 151 aa12.76□□□□□ -0.37
CBX3P4-202ENST00000540428 PREPLQ4J6C6 727 aaPredicted RBP12.76□□□□□ -0.37
CBX3P4-202ENST00000540428 SPDYCQ5MJ68 293 aa12.76□□□□□ -0.37
CBX3P4-202ENST00000540428 EOGTQ5NDL2 527 aa12.76□□□□□ -0.37
CBX3P4-202ENST00000540428 SHC4Q6S5L8 630 aa12.76□□□□□ -0.37
CBX3P4-202ENST00000540428 TMEM92Q6UXU6 159 aa12.76□□□□□ -0.37
CBX3P4-202ENST00000540428 NELFCDQ8IXH7 590 aa12.76□□□□□ -0.37
CBX3P4-202ENST00000540428 CCDC33Q8N5R6 958 aa12.76□□□□□ -0.37
CBX3P4-202ENST00000540428 IL17RCQ8NAC3 791 aa12.76□□□□□ -0.37
CBX3P4-202ENST00000540428 KCNV2Q8TDN2 545 aa12.76□□□□□ -0.37
CBX3P4-202ENST00000540428 WHAMMQ8TF30 809 aa12.76□□□□□ -0.37
CBX3P4-202ENST00000540428 ZNF516Q92618 1163 aa12.76□□□□□ -0.37
CBX3P4-202ENST00000540428 B3GNT5Q9BYG0 378 aa12.76□□□□□ -0.37
CBX3P4-202ENST00000540428 GZF1Q9H116 711 aaPredicted RBP12.76□□□□□ -0.37
CBX3P4-202ENST00000540428 TMEM9BQ9NQ34 198 aa12.76□□□□□ -0.37
CBX3P4-202ENST00000540428 ARHGEF4Q9NR80 690 aa12.76□□□□□ -0.37
CBX3P4-202ENST00000540428 COMMD8Q9NX08 183 aa12.76□□□□□ -0.37
CBX3P4-202ENST00000540428 IL37Q9NZH6 218 aa12.76□□□□□ -0.37
CBX3P4-202ENST00000540428 EVLQ9UI08 416 aaPredicted RBP12.76□□□□□ -0.37
CBX3P4-202ENST00000540428 EML5Q05BV3 1969 aa12.76□□□□□ -0.37
CBX3P4-202ENST00000540428 ATG2BQ96BY7 2078 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms