RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 NIPA1Q7RTP0 329 aa13.51□□□□□ -0.25
DNMT1-203ENST00000540357 ILKAPQ9H0C8 392 aaPredicted RBP13.51□□□□□ -0.25
DNMT1-203ENST00000540357 AGO4Q9HCK5 861 aaKnown RBP13.51□□□□□ -0.25
DNMT1-203ENST00000540357 ACP6Q9NPH0 428 aa13.51□□□□□ -0.25
DNMT1-203ENST00000540357 POLLQ9UGP5 575 aa13.51□□□□□ -0.25
DNMT1-203ENST00000540357 LAMA4Q16363 1823 aa13.51□□□□□ -0.25
DNMT1-203ENST00000540357 MAGEC1O60732 1142 aa13.51□□□□□ -0.25
DNMT1-203ENST00000540357 SERPINE1P05121 402 aa13.51□□□□□ -0.25
DNMT1-203ENST00000540357 IGBP1P78318 339 aa13.51□□□□□ -0.25
DNMT1-203ENST00000540357 SAMD3Q8N6K7 520 aa13.51□□□□□ -0.25
DNMT1-203ENST00000540357 ZDHHC15Q96MV8 337 aa13.51□□□□□ -0.25
DNMT1-203ENST00000540357 ING2Q9H160 280 aa13.51□□□□□ -0.25
DNMT1-203ENST00000540357 LRRC4Q9HBW1 653 aa13.51□□□□□ -0.25
DNMT1-203ENST00000540357 LRRC4CQ9HCJ2 640 aa13.51□□□□□ -0.25
DNMT1-203ENST00000540357 C20orf96Q9NUD7 363 aaPredicted RBP13.51□□□□□ -0.25
DNMT1-203ENST00000540357 ATXN10Q9UBB4 475 aa13.51□□□□□ -0.25
DNMT1-203ENST00000540357 USP20Q9Y2K6 914 aa13.51□□□□□ -0.25
DNMT1-203ENST00000540357 C5P01031 1676 aa13.51□□□□□ -0.25
DNMT1-203ENST00000540357 PARP4Q9UKK3 1724 aaKnown RBP13.51□□□□□ -0.25
DNMT1-203ENST00000540357 A0A1W2PPM1 405 aa13.51□□□□□ -0.25
DNMT1-203ENST00000540357 ICAM1P05362 532 aa13.51□□□□□ -0.25
DNMT1-203ENST00000540357 SLC1A6P48664 564 aa13.51□□□□□ -0.25
DNMT1-203ENST00000540357 PALB2Q86YC2 1186 aa13.51□□□□□ -0.25
DNMT1-203ENST00000540357 TTC16Q8NEE8 873 aa13.51□□□□□ -0.25
DNMT1-203ENST00000540357 LPAR1Q92633 364 aa13.51□□□□□ -0.25
DNMT1-203ENST00000540357 PKD2L2Q9NZM6 624 aa13.51□□□□□ -0.25
DNMT1-203ENST00000540357 LRRC42Q9Y546 428 aa13.51□□□□□ -0.25
DNMT1-203ENST00000540357 GNGT2O14610 69 aa13.5□□□□□ -0.25
DNMT1-203ENST00000540357 PEX11AO75192 247 aa13.5□□□□□ -0.25
DNMT1-203ENST00000540357 RALBP11234 206 aa13.5□□□□□ -0.25
DNMT1-203ENST00000540357 SLC18A1P54219 525 aa13.5□□□□□ -0.25
DNMT1-203ENST00000540357 NFIAQ12857 509 aa13.5□□□□□ -0.25
DNMT1-203ENST00000540357 FASTKD1Q53R41 847 aaKnown RBP13.5□□□□□ -0.25
DNMT1-203ENST00000540357 KYAT3Q6YP21 454 aaKnown RBP13.5□□□□□ -0.25
DNMT1-203ENST00000540357 SIX6OS1Q8N1H7 587 aa13.5□□□□□ -0.25
DNMT1-203ENST00000540357 MCUQ8NE86 351 aa13.5□□□□□ -0.25
DNMT1-203ENST00000540357 NSMCE4AQ9NXX6 385 aa13.5□□□□□ -0.25
DNMT1-203ENST00000540357 AKT3Q9Y243 479 aa13.5□□□□□ -0.25
DNMT1-203ENST00000540357 MEI4A8MW99 385 aa13.5□□□□□ -0.25
DNMT1-203ENST00000540357 F5H423 210 aaPredicted RBP13.5□□□□□ -0.25
DNMT1-203ENST00000540357 XPO1O14980 1071 aaKnown RBP13.5□□□□□ -0.25
DNMT1-203ENST00000540357 PPP1R11O60927 126 aaPredicted RBP13.5□□□□□ -0.25
DNMT1-203ENST00000540357 PRKCBP05771 671 aa13.5□□□□□ -0.25
DNMT1-203ENST00000540357 ETS1P14921 441 aa13.5□□□□□ -0.25
DNMT1-203ENST00000540357 CREB1P16220 341 aa13.5□□□□□ -0.25
DNMT1-203ENST00000540357 GLRA2P23416 452 aa13.5□□□□□ -0.25
DNMT1-203ENST00000540357 ULK2Q8IYT8 1036 aa13.5□□□□□ -0.25
DNMT1-203ENST00000540357 CXorf38Q8TB03 319 aa13.5□□□□□ -0.25
DNMT1-203ENST00000540357 ZNF606Q8WXB4 792 aa13.5□□□□□ -0.25
DNMT1-203ENST00000540357 GPRASP2Q96D09 838 aa13.5□□□□□ -0.25
DNMT1-203ENST00000540357 STN1Q9H668 368 aaKnown RBP13.5□□□□□ -0.25
DNMT1-203ENST00000540357 EFCAB1Q9HAE3 211 aa13.5□□□□□ -0.25
DNMT1-203ENST00000540357 ADRB2P07550 413 aa13.5□□□□□ -0.25
DNMT1-203ENST00000540357 SLC1A5Q15758 541 aa13.5□□□□□ -0.25
DNMT1-203ENST00000540357 SNRNP48Q6IEG0 339 aaKnown RBP13.5□□□□□ -0.25
DNMT1-203ENST00000540357 PHF13Q86YI8 300 aaPredicted RBP13.5□□□□□ -0.25
DNMT1-203ENST00000540357 RFWD2Q8NHY2 731 aa13.5□□□□□ -0.25
DNMT1-203ENST00000540357 MRPL46Q9H2W6 279 aaKnown RBP13.5□□□□□ -0.25
DNMT1-203ENST00000540357 TISP43B9A030 160 aa13.5□□□□□ -0.25
DNMT1-203ENST00000540357 SERPINA6P08185 405 aa13.5□□□□□ -0.25
DNMT1-203ENST00000540357 KYAT1Q16773 422 aa13.5□□□□□ -0.25
DNMT1-203ENST00000540357 OR6B3Q8NGW1 331 aa13.5□□□□□ -0.25
DNMT1-203ENST00000540357 ZNF333Q96JL9 665 aa13.5□□□□□ -0.25
DNMT1-203ENST00000540357 NAT9Q9BTE0 207 aa13.5□□□□□ -0.25
DNMT1-203ENST00000540357 CAAP1Q9H8G2 361 aa13.5□□□□□ -0.25
DNMT1-203ENST00000540357 AJAP1Q9UKB5 411 aaPredicted RBP13.5□□□□□ -0.25
DNMT1-203ENST00000540357 APOC4-APOC2K7ER74 178 aa13.49□□□□□ -0.25
DNMT1-203ENST00000540357 APOC2P02655 101 aa13.49□□□□□ -0.25
DNMT1-203ENST00000540357 BMPR2Q13873 1038 aa13.49□□□□□ -0.25
DNMT1-203ENST00000540357 DPYSL3Q14195 570 aa13.49□□□□□ -0.25
DNMT1-203ENST00000540357 KHDC1Q4VXA5 237 aaKnown RBP13.49□□□□□ -0.25
DNMT1-203ENST00000540357 ARMCX2Q7L311 632 aa13.49□□□□□ -0.25
DNMT1-203ENST00000540357 PID1Q7Z2X4 250 aa13.49□□□□□ -0.25
DNMT1-203ENST00000540357 GPR141Q7Z602 305 aa13.49□□□□□ -0.25
DNMT1-203ENST00000540357 TERB1Q8NA31 727 aa13.49□□□□□ -0.25
DNMT1-203ENST00000540357 ATXN7L3BQ96GX2 97 aa13.49□□□□□ -0.25
DNMT1-203ENST00000540357 NDNQ99608 321 aa13.49□□□□□ -0.25
DNMT1-203ENST00000540357 DDX4Q9NQI0 724 aaKnown RBP13.49□□□□□ -0.25
DNMT1-203ENST00000540357 BTBD7Q9P203 1132 aa13.49□□□□□ -0.25
DNMT1-203ENST00000540357 USP18Q9UMW8 372 aa13.49□□□□□ -0.25
DNMT1-203ENST00000540357 AP4S1Q9Y587 144 aa13.49□□□□□ -0.25
DNMT1-203ENST00000540357 AKAP10O43572 662 aa13.49□□□□□ -0.25
DNMT1-203ENST00000540357 FOXN2P32314 431 aa13.49□□□□□ -0.25
DNMT1-203ENST00000540357 PDK3Q15120 406 aa13.49□□□□□ -0.25
DNMT1-203ENST00000540357 GRIK5Q16478 980 aa13.49□□□□□ -0.25
DNMT1-203ENST00000540357 ZNF384Q8TF68 577 aa13.49□□□□□ -0.25
DNMT1-203ENST00000540357 PYDC1Q8WXC3 89 aa13.49□□□□□ -0.25
DNMT1-203ENST00000540357 LRRC39Q96DD0 335 aa13.49□□□□□ -0.25
DNMT1-203ENST00000540357 AGBL1Q96MI9 1066 aa13.49□□□□□ -0.25
DNMT1-203ENST00000540357 CADM1Q9BY67 442 aaKnown RBP13.49□□□□□ -0.25
DNMT1-203ENST00000540357 SCN11AQ9UI33 1791 aa13.49□□□□□ -0.25
DNMT1-203ENST00000540357 HSPA1AP0DMV8 641 aaKnown RBP13.49□□□□□ -0.25
DNMT1-203ENST00000540357 HSPA1BP0DMV9 641 aaKnown RBP13.49□□□□□ -0.25
DNMT1-203ENST00000540357 RPL5P46777 297 aaKnown RBP13.49□□□□□ -0.25
DNMT1-203ENST00000540357 KBTBD12Q3ZCT8 623 aa13.49□□□□□ -0.25
DNMT1-203ENST00000540357 GALNTL6Q49A17 601 aa13.49□□□□□ -0.25
DNMT1-203ENST00000540357 ARCQ7LC44 396 aa13.49□□□□□ -0.25
DNMT1-203ENST00000540357 NCAPG2Q86XI2 1143 aa13.49□□□□□ -0.25
DNMT1-203ENST00000540357 KYQ8NBH2 561 aa13.49□□□□□ -0.25
DNMT1-203ENST00000540357 SNRNP27Q8WVK2 155 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms