RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 SCNM1Q9BWG6 230 aa21.3■■□□□ 1
LPCAT3-210ENST00000540090 POLMQ9NP87 494 aaPredicted RBP21.3■■□□□ 1
LPCAT3-210ENST00000540090 TMEM74BQ9NUR3 256 aa21.3■■□□□ 1
LPCAT3-210ENST00000540090 FBXO2Q9UK22 296 aaPredicted RBP21.3■■□□□ 1
LPCAT3-210ENST00000540090 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.3■■□□□ 1
LPCAT3-210ENST00000540090 SRPRBQ9Y5M8 271 aaKnown RBP21.3■■□□□ 1
LPCAT3-210ENST00000540090 CPQQ9Y646 472 aa21.3■■□□□ 1
LPCAT3-210ENST00000540090 MYO16Q9Y6X6 1858 aa21.3■■□□□ 1
LPCAT3-210ENST00000540090 THADAQ6YHU6 1953 aa21.3■■□□□ 1
LPCAT3-210ENST00000540090 PTPRJQ12913 1337 aa21.29■■□□□ 1
LPCAT3-210ENST00000540090 TRIM66O15016 1216 aa21.29■■□□□ 1
LPCAT3-210ENST00000540090 PRPF6O94906 941 aaKnown RBP21.29■■□□□ 1
LPCAT3-210ENST00000540090 KAT7O95251 611 aa21.29■■□□□ 1
LPCAT3-210ENST00000540090 KLF8O95600 359 aaPredicted RBP21.29■■□□□ 1
LPCAT3-210ENST00000540090 APODP05090 189 aa21.29■■□□□ 1
LPCAT3-210ENST00000540090 IDEP14735 1019 aa21.29■■□□□ 1
LPCAT3-210ENST00000540090 TIE1P35590 1138 aa21.29■■□□□ 1
LPCAT3-210ENST00000540090 KIR2DL1P43626 348 aaPredicted RBP21.29■■□□□ 1
LPCAT3-210ENST00000540090 SURF1Q15526 300 aa21.29■■□□□ 1
LPCAT3-210ENST00000540090 MAP7D1Q3KQU3 841 aa21.29■■□□□ 1
LPCAT3-210ENST00000540090 SPDYCQ5MJ68 293 aa21.29■■□□□ 1
LPCAT3-210ENST00000540090 EOGTQ5NDL2 527 aa21.29■■□□□ 1
LPCAT3-210ENST00000540090 EMC10Q5UCC4 262 aa21.29■■□□□ 1
LPCAT3-210ENST00000540090 FRMD1Q8N878 549 aa21.29■■□□□ 1
LPCAT3-210ENST00000540090 SPACA7Q96KW9 195 aa21.29■■□□□ 1
LPCAT3-210ENST00000540090 NUSAP1Q9BXS6 441 aaKnown RBP21.29■■□□□ 1
LPCAT3-210ENST00000540090 MBD1Q9UIS9 605 aaPredicted RBP21.29■■□□□ 1
LPCAT3-210ENST00000540090 KIAA1549LQ6ZVL6 1849 aa21.29■■□□□ 1
LPCAT3-210ENST00000540090 WDFY3Q8IZQ1 3526 aa21.28■■□□□ 1
LPCAT3-210ENST00000540090 IGF2RP11717 2491 aa21.28■■□□□ 1
LPCAT3-210ENST00000540090 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.28■■□□□ 1
LPCAT3-210ENST00000540090 ZNF233A6NK53 670 aa21.28■■□□□ 1
LPCAT3-210ENST00000540090 F8VP50 259 aa21.28■■□□□ 1
LPCAT3-210ENST00000540090 MAP3K13O43283 966 aa21.28■■□□□ 1
LPCAT3-210ENST00000540090 OAS1P00973 400 aaKnown RBP21.28■■□□□ 1
LPCAT3-210ENST00000540090 TNNC2P02585 160 aa21.28■■□□□ 1
LPCAT3-210ENST00000540090 GRIA2P42262 883 aa21.28■■□□□ 1
LPCAT3-210ENST00000540090 PTGER3P43115 390 aa21.28■■□□□ 1
LPCAT3-210ENST00000540090 TNFRSF4P43489 277 aa21.28■■□□□ 1
LPCAT3-210ENST00000540090 TAF10Q12962 218 aa21.28■■□□□ 1
LPCAT3-210ENST00000540090 C12orf40Q86WS4 652 aa21.28■■□□□ 1
LPCAT3-210ENST00000540090 TMEFF1Q8IYR6 380 aa21.28■■□□□ 1
LPCAT3-210ENST00000540090 CLIC6Q96NY7 704 aa21.28■■□□□ 1
LPCAT3-210ENST00000540090 PANK4Q9NVE7 773 aa21.28■■□□□ 1
LPCAT3-210ENST00000540090 SMPD4Q9NXE4 827 aa21.28■■□□□ 1
LPCAT3-210ENST00000540090 NME7Q9Y5B8 376 aa21.28■■□□□ 1
LPCAT3-210ENST00000540090 GON4LQ3T8J9 2241 aa21.28■■□□□ 1
LPCAT3-210ENST00000540090 ASCC3Q8N3C0 2202 aaKnown RBP21.28■■□□□ 1
LPCAT3-210ENST00000540090 ATRXP46100 2492 aa21.27■■□□□ 1
LPCAT3-210ENST00000540090 ADAM23O75077 832 aa21.27■■□□□ 1
LPCAT3-210ENST00000540090 ABL1P00519 1130 aa21.27■■□□□ 1
LPCAT3-210ENST00000540090 FAM163BP0C2L3 166 aa21.27■■□□□ 1
LPCAT3-210ENST00000540090 GNL1P36915 607 aaPredicted RBP21.27■■□□□ 1
LPCAT3-210ENST00000540090 TXLNAP40222 546 aa21.27■■□□□ 1
LPCAT3-210ENST00000540090 DPP6P42658 865 aa21.27■■□□□ 1
LPCAT3-210ENST00000540090 RESTQ13127 1097 aa21.27■■□□□ 1
LPCAT3-210ENST00000540090 BYSLQ13895 437 aaKnown RBP21.27■■□□□ 1
LPCAT3-210ENST00000540090 TDRD10Q5VZ19 366 aaKnown RBP21.27■■□□□ 1
LPCAT3-210ENST00000540090 SLC23A3Q6PIS1 610 aa21.27■■□□□ 1
LPCAT3-210ENST00000540090 CCDC73Q6ZRK6 1079 aa21.27■■□□□ 1
LPCAT3-210ENST00000540090 CBWD2Q8IUF1 395 aa21.27■■□□□ 1
LPCAT3-210ENST00000540090 MMS19Q96T76 1030 aa21.27■■□□□ 1
LPCAT3-210ENST00000540090 MRPL45Q9BRJ2 306 aaKnown RBP21.27■■□□□ 1
LPCAT3-210ENST00000540090 SLC32A1Q9H598 525 aa21.27■■□□□ 1
LPCAT3-210ENST00000540090 ARHGEF4Q9NR80 690 aa21.27■■□□□ 1
LPCAT3-210ENST00000540090 CFAP97Q9P2B7 532 aa21.27■■□□□ 1
LPCAT3-210ENST00000540090 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.26■□□□□ 0.99
LPCAT3-210ENST00000540090 SCAMP3O14828 347 aaKnown RBP21.26■□□□□ 0.99
LPCAT3-210ENST00000540090 TACC1O75410 805 aa21.26■□□□□ 0.99
LPCAT3-210ENST00000540090 ADH1CP00326 375 aa21.26■□□□□ 0.99
LPCAT3-210ENST00000540090 ENGP17813 658 aa21.26■□□□□ 0.99
LPCAT3-210ENST00000540090 MDH1BQ5I0G3 518 aa21.26■□□□□ 0.99
LPCAT3-210ENST00000540090 PEAR1Q5VY43 1037 aaPredicted RBP21.26■□□□□ 0.99
LPCAT3-210ENST00000540090 ARMCX6Q7L4S7 300 aa21.26■□□□□ 0.99
LPCAT3-210ENST00000540090 TRAPPC11Q7Z392 1133 aa21.26■□□□□ 0.99
LPCAT3-210ENST00000540090 DDX42Q86XP3 938 aaKnown RBP eCLIP21.26■□□□□ 0.99
LPCAT3-210ENST00000540090 WDR49Q8IV35 697 aa21.26■□□□□ 0.99
LPCAT3-210ENST00000540090 SLITRK1Q96PX8 696 aa21.26■□□□□ 0.99
LPCAT3-210ENST00000540090 BCCIPQ9P287 314 aaKnown RBP eCLIP21.26■□□□□ 0.99
LPCAT3-210ENST00000540090 TBC1D14Q9P2M4 693 aa21.26■□□□□ 0.99
LPCAT3-210ENST00000540090 PILRBQ9UKJ0 227 aa21.26■□□□□ 0.99
LPCAT3-210ENST00000540090 CIZ1Q9ULV3 898 aaPredicted RBP21.26■□□□□ 0.99
LPCAT3-210ENST00000540090 PCNX2A6NKB5 2137 aa21.26■□□□□ 0.99
LPCAT3-210ENST00000540090 SRRM3A6NNA2 597 aaPredicted RBP21.25■□□□□ 0.99
LPCAT3-210ENST00000540090 UPK3BL1B0FP48 263 aa21.25■□□□□ 0.99
LPCAT3-210ENST00000540090 UPK3BL2E5RIL1 263 aa21.25■□□□□ 0.99
LPCAT3-210ENST00000540090 CST3P01034 146 aaPredicted RBP21.25■□□□□ 0.99
LPCAT3-210ENST00000540090 ADH5P11766 374 aa21.25■□□□□ 0.99
LPCAT3-210ENST00000540090 MAPK8P45983 427 aa21.25■□□□□ 0.99
LPCAT3-210ENST00000540090 HS2ST1Q7LGA3 356 aa21.25■□□□□ 0.99
LPCAT3-210ENST00000540090 PIP4P1Q86T03 277 aa21.25■□□□□ 0.99
LPCAT3-210ENST00000540090 PHTF2Q8N3S3 785 aa21.25■□□□□ 0.99
LPCAT3-210ENST00000540090 KCNV2Q8TDN2 545 aa21.25■□□□□ 0.99
LPCAT3-210ENST00000540090 HMGB4Q8WW32 186 aa21.25■□□□□ 0.99
LPCAT3-210ENST00000540090 SNX25Q9H3E2 840 aa21.25■□□□□ 0.99
LPCAT3-210ENST00000540090 TMEM30AQ9NV96 361 aa21.25■□□□□ 0.99
LPCAT3-210ENST00000540090 NEUROG3Q9Y4Z2 214 aa21.25■□□□□ 0.99
LPCAT3-210ENST00000540090 PTPRDP23468 1912 aa21.24■□□□□ 0.99
LPCAT3-210ENST00000540090 E2F8A0AVK6 867 aa21.24■□□□□ 0.99
LPCAT3-210ENST00000540090 MBL2P11226 248 aaPredicted RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms