RNA–Protein interactions for RNA: ENST00000540086.5

CDH19-203, Transcript of cadherin 19, humanhuman

TSL 2 BASIC

Gene CDH19, Length 1,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-203ENST00000540086 MAN1A1P33908 653 aa7.25□□□□□ -1.25
CDH19-203ENST00000540086 GTF2F1P35269 517 aaKnown RBP eCLIP7.25□□□□□ -1.25
CDH19-203ENST00000540086 PAFAH1B1P43034 410 aa7.25□□□□□ -1.25
CDH19-203ENST00000540086 TKTL1P51854 596 aa7.25□□□□□ -1.25
CDH19-203ENST00000540086 TERF1P54274 439 aa7.25□□□□□ -1.25
CDH19-203ENST00000540086 ELAVL2Q12926 359 aaKnown RBP7.25□□□□□ -1.25
CDH19-203ENST00000540086 MRPL58Q14197 206 aaKnown RBP7.25□□□□□ -1.25
CDH19-203ENST00000540086 PIGHQ14442 188 aaPredicted RBP7.25□□□□□ -1.25
CDH19-203ENST00000540086 MAPRE1Q15691 268 aaKnown RBP7.25□□□□□ -1.25
CDH19-203ENST00000540086 CFAP221Q4G0U5 840 aa7.25□□□□□ -1.25
CDH19-203ENST00000540086 ZNF280DQ6N043 979 aa7.25□□□□□ -1.25
CDH19-203ENST00000540086 CC2D1AQ6P1N0 951 aaPredicted RBP7.25□□□□□ -1.25
CDH19-203ENST00000540086 KCNT2Q6UVM3 1135 aa7.25□□□□□ -1.25
CDH19-203ENST00000540086 PRSS55Q6UWB4 352 aaPredicted RBP7.25□□□□□ -1.25
CDH19-203ENST00000540086 RSPO2Q6UXX9 243 aaPredicted RBP7.25□□□□□ -1.25
CDH19-203ENST00000540086 ZDHHC17Q8IUH5 632 aa7.25□□□□□ -1.25
CDH19-203ENST00000540086 CMTR2Q8IYT2 770 aaKnown RBP7.25□□□□□ -1.25
CDH19-203ENST00000540086 DCP1BQ8IZD4 617 aaKnown RBP7.25□□□□□ -1.25
CDH19-203ENST00000540086 SIX6OS1Q8N1H7 587 aa7.25□□□□□ -1.25
CDH19-203ENST00000540086 ARFGAP1Q8N6T3 406 aa7.25□□□□□ -1.25
CDH19-203ENST00000540086 NIPA2Q8N8Q9 360 aa7.25□□□□□ -1.25
CDH19-203ENST00000540086 RXFP2Q8WXD0 754 aa7.25□□□□□ -1.25
CDH19-203ENST00000540086 KHSRPQ92945 711 aaKnown RBP eCLIP7.25□□□□□ -1.25
CDH19-203ENST00000540086 IGSF21Q96ID5 467 aa7.25□□□□□ -1.25
CDH19-203ENST00000540086 RNPC3Q96LT9 517 aaKnown RBP7.25□□□□□ -1.25
CDH19-203ENST00000540086 CFAP57Q96MR6 1250 aa7.25□□□□□ -1.25
CDH19-203ENST00000540086 ZNF558Q96NG5 402 aa7.25□□□□□ -1.25
CDH19-203ENST00000540086 PGLYRP2Q96PD5 576 aa7.25□□□□□ -1.25
CDH19-203ENST00000540086 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.25□□□□□ -1.25
CDH19-203ENST00000540086 TTPALQ9BTX7 342 aa7.25□□□□□ -1.25
CDH19-203ENST00000540086 CYLDQ9NQC7 956 aa7.25□□□□□ -1.25
CDH19-203ENST00000540086 KLHL11Q9NVR0 708 aa7.25□□□□□ -1.25
CDH19-203ENST00000540086 ABI2Q9NYB9 513 aaPredicted RBP7.25□□□□□ -1.25
CDH19-203ENST00000540086 TMEM59LQ9UK28 342 aa7.25□□□□□ -1.25
CDH19-203ENST00000540086 EFCAB8A8MWE9 144 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 HHLA1C9JL84 531 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 PGRMC1O00264 195 aaKnown RBP7.24□□□□□ -1.25
CDH19-203ENST00000540086 CES2O00748 559 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 C2CD2LO14523 706 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 LRCH4O75427 683 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 FGGP02679 453 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 PYGMP11217 842 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 CPB1P15086 417 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 RPL17P18621 184 aaKnown RBP7.24□□□□□ -1.25
CDH19-203ENST00000540086 GPD1P21695 349 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 ZNF143P52747 638 aaPredicted RBP7.24□□□□□ -1.25
CDH19-203ENST00000540086 RWDD2BP57060 319 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 MRPS5P82675 430 aaKnown RBP7.24□□□□□ -1.25
CDH19-203ENST00000540086 ADCY1Q08828 1119 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 COL4A6Q14031 1691 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 LLGL1Q15334 1064 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 ELF2Q15723 593 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 CDO1Q16878 200 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 ERCC6LQ2NKX8 1250 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 C15orf59Q2T9L4 293 aaPredicted RBP7.24□□□□□ -1.25
CDH19-203ENST00000540086 ATP13A4Q4VNC1 1196 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 RAB6CQ53S08 254 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 TMEM240Q5SV17 173 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 SH3PXD2AQ5TCZ1 1133 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 TXNRD3NBQ6F5E7 133 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 C4orf50Q6ZRC1 276 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 RSRC2Q7L4I2 434 aaKnown RBP7.24□□□□□ -1.25
CDH19-203ENST00000540086 SLC26A9Q7LBE3 791 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 RHOT1Q8IXI2 618 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 RASGEF1CQ8N431 466 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 TTC9BQ8N6N2 239 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 COLGALT1Q8NBJ5 622 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 SPATA4Q8NEY3 305 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 FNIP1Q8TF40 1166 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 RIN2Q8WYP3 895 aaPredicted RBP7.24□□□□□ -1.25
CDH19-203ENST00000540086 KCTD13Q8WZ19 329 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 GOLGA1Q92805 767 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 ACSF2Q96CM8 615 aaPredicted RBP7.24□□□□□ -1.25
CDH19-203ENST00000540086 ULBP1Q9BZM6 244 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 RAB6CQ9H0N0 254 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 CARD9Q9H257 536 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 EPC1Q9H2F5 836 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 CSNK1G1Q9HCP0 422 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 DMAP1Q9NPF5 467 aaPredicted RBP7.24□□□□□ -1.25
CDH19-203ENST00000540086 LCMT1Q9UIC8 334 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 OR6C75A6NL08 312 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 H7C4K7 107 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 ADAM12O43184 909 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 PSTPIP1O43586 416 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 GJB5O95377 273 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 EFEMP2O95967 443 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 LAG3P18627 525 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 TFE3P19532 575 aaPredicted RBP7.24□□□□□ -1.25
CDH19-203ENST00000540086 GRIK1P39086 918 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 GPR15P49685 360 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 ATP11AP98196 1134 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 USP41Q3LFD5 358 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 CCDC14Q49A88 953 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 RAB41Q5JT25 222 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 ZFYVE27Q5T4F4 411 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 SEL1L2Q5TEA6 688 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 SDHAF4Q5VUM1 108 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 PSRC1Q6PGN9 363 aaPredicted RBP7.24□□□□□ -1.25
CDH19-203ENST00000540086 HFE2Q6ZVN8 426 aa7.24□□□□□ -1.25
CDH19-203ENST00000540086 ANKS3Q6ZW76 656 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms