RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 DNAJB4Q9UDY4 337 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 CDH7Q9ULB5 785 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 NDRG2Q9UN36 371 aaKnown RBP4.43□□□□□ -1.7
C2CD3-214ENST00000540057 NEUROG3Q9Y4Z2 214 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 SLC12A7Q9Y666 1083 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 ZFP37Q9Y6Q3 630 aaPredicted RBP4.43□□□□□ -1.7
C2CD3-214ENST00000540057 BPTFQ12830 3046 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 LAMA1P25391 3075 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 AKAP13Q12802 2813 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 CEP295Q9C0D2 2601 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 SPAG17Q6Q759 2223 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 A0A0U1RQF3 1178 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 EIF4E1BA6NMX2 242 aaKnown RBP4.42□□□□□ -1.7
C2CD3-214ENST00000540057 K7ESF4 209 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 MAST4O15021 2626 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 ZBTB5O15062 677 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 SMARCA5O60264 1052 aaPredicted RBP4.42□□□□□ -1.7
C2CD3-214ENST00000540057 B4GALT3O60512 393 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 GPR32O75388 356 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 EPN2O95208 641 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 GLUD1P00367 558 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 FGAP02671 866 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 ZSCAN20P17040 1043 aaPredicted RBP4.42□□□□□ -1.7
C2CD3-214ENST00000540057 HOXC13P31276 330 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 MFAP1P55081 439 aaKnown RBP4.42□□□□□ -1.7
C2CD3-214ENST00000540057 NTHL1P78549 312 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 TROAPQ12815 778 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 ALX1Q15699 326 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 SLC35G1Q2M3R5 365 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 DPY19L1Q2PZI1 675 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 KIAA1211LQ6NV74 962 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 MTSS1LQ765P7 747 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 CEP68Q76N32 757 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 PLPPR4Q7Z2D5 763 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 GRASPQ7Z6J2 395 aaPredicted RBP4.42□□□□□ -1.7
C2CD3-214ENST00000540057 LONP2Q86WA8 852 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 FTSJ3Q8IY81 847 aaKnown RBP4.42□□□□□ -1.7
C2CD3-214ENST00000540057 ARHGEF39Q8N4T4 335 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 HDAC7Q8WUI4 952 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 FGF13Q92913 245 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 TNPO1Q92973 898 aaKnown RBP4.42□□□□□ -1.7
C2CD3-214ENST00000540057 PHKBQ93100 1093 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 GPRASP2Q96D09 838 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 TSPAN17Q96FV3 270 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 RPS6KC1Q96S38 1066 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 NOTCH4Q99466 2003 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 KXD1Q9BQD3 176 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 IER2Q9BTL4 223 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 PHF20Q9BVI0 1012 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 GBP3Q9H0R5 595 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 LMAN1LQ9HAT1 526 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 TBC1D13Q9NVG8 400 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 ZDHHC7Q9NXF8 308 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 DPP7Q9UHL4 492 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 BAZ2BQ9UIF8 2168 aaKnown RBP4.42□□□□□ -1.7
C2CD3-214ENST00000540057 MRPS17Q9Y2R5 130 aaKnown RBP4.42□□□□□ -1.7
C2CD3-214ENST00000540057 MSRB2Q9Y3D2 182 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 BACE2Q9Y5Z0 518 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 PMF1-BGLAPU3KQ54 211 aa4.42□□□□□ -1.7
C2CD3-214ENST00000540057 COL4A2P08572 1712 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 WDR81Q562E7 1941 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 HELZ2Q9BYK8 2649 aaKnown RBP4.41□□□□□ -1.7
C2CD3-214ENST00000540057 A0A1W2PQJ5 194 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 SH3D21A4FU49 640 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 C4orf47A7E2U8 309 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 KLRF2D3W0D1 207 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 TGM5O43548 720 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 PRICKLE3O43900 615 aaPredicted RBP4.41□□□□□ -1.7
C2CD3-214ENST00000540057 HMMRO75330 724 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 DDHD2O94830 711 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 VTNP04004 478 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 SOD2P04179 222 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 PRB1P04280 392 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 URODP06132 367 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 CELA3BP08861 270 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 PARP1P09874 1014 aaKnown RBP4.41□□□□□ -1.7
C2CD3-214ENST00000540057 CHRNB1P11230 501 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 CEACAM1P13688 526 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 STAT5BP51692 787 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 AK2P54819 239 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 HAND2P61296 217 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 SLC7A5Q01650 507 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 LONRF3Q496Y0 759 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 NOMO2Q5JPE7 1267 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 LARP1BQ659C4 914 aaKnown RBP4.41□□□□□ -1.7
C2CD3-214ENST00000540057 MBLAC2Q68D91 279 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 HEATR6Q6AI08 1181 aaKnown RBP4.41□□□□□ -1.7
C2CD3-214ENST00000540057 TCEAL6Q6IPX3 200 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 TAS1R1Q7RTX1 841 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 B3GNT8Q7Z7M8 397 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 PALB2Q86YC2 1186 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 ZNF280BQ86YH2 543 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 HOMER1Q86YM7 354 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 TBC1D10CQ8IV04 446 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 RNF168Q8IYW5 571 aaPredicted RBP4.41□□□□□ -1.7
C2CD3-214ENST00000540057 FAM169BQ8N8A8 192 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 NETO2Q8NC67 525 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 OR6P1Q8NGX9 317 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 ALG3Q92685 438 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 LPPQ93052 612 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms