RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 CLEC4CQ8WTT0 213 aa17■□□□□ 0.31
TRAF3-204ENST00000539721 C2orf15Q8WU43 125 aaKnown RBP17■□□□□ 0.31
TRAF3-204ENST00000539721 PIWIL1Q96J94 861 aaKnown RBP17■□□□□ 0.31
TRAF3-204ENST00000539721 ZBP1Q9H171 429 aa17■□□□□ 0.31
TRAF3-204ENST00000539721 ABCB6Q9NP58 842 aa17■□□□□ 0.31
TRAF3-204ENST00000539721 MRPL17Q9NRX2 175 aaKnown RBP17■□□□□ 0.31
TRAF3-204ENST00000539721 AMFRQ9UKV5 643 aa17■□□□□ 0.31
TRAF3-204ENST00000539721 WDR27A2RRH5 827 aa16.99■□□□□ 0.31
TRAF3-204ENST00000539721 HHLA1C9JL84 531 aa16.99■□□□□ 0.31
TRAF3-204ENST00000539721 NCK2O43639 380 aa16.99■□□□□ 0.31
TRAF3-204ENST00000539721 CA8P35219 290 aa16.99■□□□□ 0.31
TRAF3-204ENST00000539721 MAGEA11P43364 429 aa16.99■□□□□ 0.31
TRAF3-204ENST00000539721 MEI1Q5TIA1 1274 aa16.99■□□□□ 0.31
TRAF3-204ENST00000539721 GPRIN1Q7Z2K8 1008 aa16.99■□□□□ 0.31
TRAF3-204ENST00000539721 ATAD1Q8NBU5 361 aa16.99■□□□□ 0.31
TRAF3-204ENST00000539721 AUTS2Q8WXX7 1259 aa16.99■□□□□ 0.31
TRAF3-204ENST00000539721 CLSTN3Q9BQT9 956 aa16.99■□□□□ 0.31
TRAF3-204ENST00000539721 PNPLA8Q9NP80 782 aa16.99■□□□□ 0.31
TRAF3-204ENST00000539721 IP6K2Q9UHH9 426 aa16.99■□□□□ 0.31
TRAF3-204ENST00000539721 HYOU1Q9Y4L1 999 aa16.99■□□□□ 0.31
TRAF3-204ENST00000539721 ALG6Q9Y672 507 aa16.99■□□□□ 0.31
TRAF3-204ENST00000539721 TRIM66O15016 1216 aa16.98■□□□□ 0.31
TRAF3-204ENST00000539721 PROSCO94903 275 aa16.98■□□□□ 0.31
TRAF3-204ENST00000539721 RFC1P35251 1148 aaPredicted RBP16.98■□□□□ 0.31
TRAF3-204ENST00000539721 SCNN1AP37088 669 aa16.98■□□□□ 0.31
TRAF3-204ENST00000539721 RNASE9P60153 205 aaKnown RBP16.98■□□□□ 0.31
TRAF3-204ENST00000539721 RAB41Q5JT25 222 aa16.98■□□□□ 0.31
TRAF3-204ENST00000539721 NT5DC3Q86UY8 548 aa16.98■□□□□ 0.31
TRAF3-204ENST00000539721 EMC1Q8N766 993 aa16.98■□□□□ 0.31
TRAF3-204ENST00000539721 C17orf80Q9BSJ5 609 aa16.98■□□□□ 0.31
TRAF3-204ENST00000539721 PLVAPQ9BX97 442 aa16.98■□□□□ 0.31
TRAF3-204ENST00000539721 ULBP1Q9BZM6 244 aa16.98■□□□□ 0.31
TRAF3-204ENST00000539721 LCMT1Q9UIC8 334 aa16.98■□□□□ 0.31
TRAF3-204ENST00000539721 PACSIN2Q9UNF0 486 aaPredicted RBP16.98■□□□□ 0.31
TRAF3-204ENST00000539721 SSX2IPQ9Y2D8 614 aa16.98■□□□□ 0.31
TRAF3-204ENST00000539721 SPOPO43791 374 aa16.97■□□□□ 0.31
TRAF3-204ENST00000539721 GRAP2O75791 330 aa16.97■□□□□ 0.31
TRAF3-204ENST00000539721 URI1O94763 535 aaPredicted RBP16.97■□□□□ 0.31
TRAF3-204ENST00000539721 FBXO21O94952 628 aa16.97■□□□□ 0.31
TRAF3-204ENST00000539721 CTSAP10619 480 aa16.97■□□□□ 0.31
TRAF3-204ENST00000539721 COMTP21964 271 aa16.97■□□□□ 0.31
TRAF3-204ENST00000539721 NDUFV1P49821 464 aa16.97■□□□□ 0.31
TRAF3-204ENST00000539721 CREMQ03060 361 aa16.97■□□□□ 0.31
TRAF3-204ENST00000539721 GPR65Q8IYL9 337 aa16.97■□□□□ 0.31
TRAF3-204ENST00000539721 TTC9BQ8N6N2 239 aa16.97■□□□□ 0.31
TRAF3-204ENST00000539721 C8orf48Q96LL4 319 aa16.97■□□□□ 0.31
TRAF3-204ENST00000539721 GDF15Q99988 308 aa16.97■□□□□ 0.31
TRAF3-204ENST00000539721 TLR10Q9BXR5 811 aa16.97■□□□□ 0.31
TRAF3-204ENST00000539721 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.97■□□□□ 0.31
TRAF3-204ENST00000539721 TMEM59LQ9UK28 342 aa16.97■□□□□ 0.31
TRAF3-204ENST00000539721 SLC27A5Q9Y2P5 690 aa16.97■□□□□ 0.31
TRAF3-204ENST00000539721 PCDHA11Q9Y5I1 949 aa16.97■□□□□ 0.31
TRAF3-204ENST00000539721 MYO16Q9Y6X6 1858 aa16.97■□□□□ 0.31
TRAF3-204ENST00000539721 ARHGEF15O94989 841 aa16.97■□□□□ 0.31
TRAF3-204ENST00000539721 VNN2O95498 520 aa16.97■□□□□ 0.31
TRAF3-204ENST00000539721 CA3P07451 260 aa16.97■□□□□ 0.31
TRAF3-204ENST00000539721 DNA2P51530 1060 aa16.97■□□□□ 0.31
TRAF3-204ENST00000539721 MRPS5P82675 430 aaKnown RBP16.97■□□□□ 0.31
TRAF3-204ENST00000539721 OGDHQ02218 1023 aa16.97■□□□□ 0.31
TRAF3-204ENST00000539721 ADCY1Q08828 1119 aa16.97■□□□□ 0.31
TRAF3-204ENST00000539721 RPS6KA1Q15418 735 aa16.97■□□□□ 0.31
TRAF3-204ENST00000539721 TAF5Q15542 800 aa16.97■□□□□ 0.31
TRAF3-204ENST00000539721 DDR2Q16832 855 aa16.97■□□□□ 0.31
TRAF3-204ENST00000539721 MGAT5BQ3V5L5 792 aa16.97■□□□□ 0.31
TRAF3-204ENST00000539721 EFHC1Q5JVL4 640 aa16.97■□□□□ 0.31
TRAF3-204ENST00000539721 SLC26A9Q7LBE3 791 aa16.97■□□□□ 0.31
TRAF3-204ENST00000539721 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.97■□□□□ 0.31
TRAF3-204ENST00000539721 SEPT5Q99719 369 aaPredicted RBP16.97■□□□□ 0.31
TRAF3-204ENST00000539721 ALG13Q9NP73 1137 aaKnown RBP16.97■□□□□ 0.31
TRAF3-204ENST00000539721 CNGB3Q9NQW8 809 aa16.97■□□□□ 0.31
TRAF3-204ENST00000539721 MTUS1Q9ULD2 1270 aa16.97■□□□□ 0.31
TRAF3-204ENST00000539721 LZTS1Q9Y250 596 aa16.97■□□□□ 0.31
TRAF3-204ENST00000539721 H0YGN5 161 aa16.96■□□□□ 0.31
TRAF3-204ENST00000539721 HAPLN1P10915 354 aaPredicted RBP16.96■□□□□ 0.31
TRAF3-204ENST00000539721 GPD1P21695 349 aa16.96■□□□□ 0.31
TRAF3-204ENST00000539721 PSMA2P25787 234 aa16.96■□□□□ 0.31
TRAF3-204ENST00000539721 SLC1A1P43005 524 aa16.96■□□□□ 0.31
TRAF3-204ENST00000539721 GPR15P49685 360 aa16.96■□□□□ 0.31
TRAF3-204ENST00000539721 SLC5A3P53794 718 aa16.96■□□□□ 0.31
TRAF3-204ENST00000539721 DAOAP59103 153 aa16.96■□□□□ 0.31
TRAF3-204ENST00000539721 ZNF252P-AS1Q0IIN9 211 aa16.96■□□□□ 0.31
TRAF3-204ENST00000539721 DUSP4Q13115 394 aa16.96■□□□□ 0.31
TRAF3-204ENST00000539721 PAPD7Q5XG87 772 aaKnown RBP16.96■□□□□ 0.31
TRAF3-204ENST00000539721 TMC7Q7Z402 723 aa16.96■□□□□ 0.31
TRAF3-204ENST00000539721 CPNE8Q86YQ8 564 aa16.96■□□□□ 0.31
TRAF3-204ENST00000539721 FNIP1Q8TF40 1166 aa16.96■□□□□ 0.31
TRAF3-204ENST00000539721 NDRG1Q92597 394 aaKnown RBP16.96■□□□□ 0.31
TRAF3-204ENST00000539721 FAM149B1Q96BN6 582 aa16.96■□□□□ 0.31
TRAF3-204ENST00000539721 CRISPLD1Q9H336 500 aa16.96■□□□□ 0.31
TRAF3-204ENST00000539721 FNIP2Q9P278 1114 aa16.96■□□□□ 0.31
TRAF3-204ENST00000539721 AFF4Q9UHB7 1163 aaKnown RBP16.96■□□□□ 0.31
TRAF3-204ENST00000539721 USTQ9Y2C2 406 aa16.96■□□□□ 0.31
TRAF3-204ENST00000539721 SART1O43290 800 aaKnown RBP16.95■□□□□ 0.3
TRAF3-204ENST00000539721 ZBED1O96006 694 aa16.95■□□□□ 0.3
TRAF3-204ENST00000539721 USP17L7P0C7H9 530 aa16.95■□□□□ 0.3
TRAF3-204ENST00000539721 MAN1A1P33908 653 aa16.95■□□□□ 0.3
TRAF3-204ENST00000539721 FLT3P36888 993 aa16.95■□□□□ 0.3
TRAF3-204ENST00000539721 IFRD2Q12894 506 aaPredicted RBP16.95■□□□□ 0.3
TRAF3-204ENST00000539721 PIGHQ14442 188 aaPredicted RBP16.95■□□□□ 0.3
TRAF3-204ENST00000539721 SDHAF4Q5VUM1 108 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms