RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 PAEPP09466 180 aa16.66■□□□□ 0.26
RPAIN-206ENST00000539417 ZXDAP98168 799 aa16.66■□□□□ 0.26
RPAIN-206ENST00000539417 PDE4CQ08493 712 aa16.66■□□□□ 0.26
RPAIN-206ENST00000539417 TDGQ13569 410 aa16.66■□□□□ 0.26
RPAIN-206ENST00000539417 PKDCCQ504Y2 493 aa16.66■□□□□ 0.26
RPAIN-206ENST00000539417 VITQ6UXI7 678 aa16.66■□□□□ 0.26
RPAIN-206ENST00000539417 ARID3BQ8IVW6 561 aaPredicted RBP16.66■□□□□ 0.26
RPAIN-206ENST00000539417 ANKRD52Q8NB46 1076 aa16.66■□□□□ 0.26
RPAIN-206ENST00000539417 SMARCD2Q92925 531 aa16.66■□□□□ 0.26
RPAIN-206ENST00000539417 CEP295NLQ96MC4 621 aa16.66■□□□□ 0.26
RPAIN-206ENST00000539417 NAA15Q9BXJ9 866 aaKnown RBP16.66■□□□□ 0.26
RPAIN-206ENST00000539417 C11orf16Q9NQ32 467 aa16.66■□□□□ 0.26
RPAIN-206ENST00000539417 IGSF9Q9P2J2 1179 aa16.66■□□□□ 0.26
RPAIN-206ENST00000539417 CHORDC1Q9UHD1 332 aaPredicted RBP16.66■□□□□ 0.26
RPAIN-206ENST00000539417 SORCS3Q9UPU3 1222 aa16.66■□□□□ 0.26
RPAIN-206ENST00000539417 CCL26Q9Y258 94 aa16.66■□□□□ 0.26
RPAIN-206ENST00000539417 ZNF840PA6NDX5 716 aa16.65■□□□□ 0.26
RPAIN-206ENST00000539417 SMTNL1A8MU46 457 aa16.65■□□□□ 0.26
RPAIN-206ENST00000539417 FOXN3O00409 490 aaPredicted RBP16.65■□□□□ 0.26
RPAIN-206ENST00000539417 FGF19O95750 216 aa16.65■□□□□ 0.26
RPAIN-206ENST00000539417 YWHAQP27348 245 aa16.65■□□□□ 0.26
RPAIN-206ENST00000539417 USP8P40818 1118 aa16.65■□□□□ 0.26
RPAIN-206ENST00000539417 GRM2Q14416 872 aa16.65■□□□□ 0.26
RPAIN-206ENST00000539417 SYCP1Q15431 976 aa16.65■□□□□ 0.26
RPAIN-206ENST00000539417 NAP1L5Q96NT1 182 aaPredicted RBP16.65■□□□□ 0.26
RPAIN-206ENST00000539417 TRPC7Q9HCX4 862 aa16.65■□□□□ 0.26
RPAIN-206ENST00000539417 GMIPQ9P107 970 aa16.65■□□□□ 0.26
RPAIN-206ENST00000539417 UXTQ9UBK9 157 aaPredicted RBP16.65■□□□□ 0.26
RPAIN-206ENST00000539417 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.65■□□□□ 0.26
RPAIN-206ENST00000539417 NUP210Q8TEM1 1887 aaPredicted RBP16.65■□□□□ 0.26
RPAIN-206ENST00000539417 MYO16Q9Y6X6 1858 aa16.64■□□□□ 0.25
RPAIN-206ENST00000539417 FAM92AA1XBS5 289 aa16.64■□□□□ 0.25
RPAIN-206ENST00000539417 CYP26A1O43174 497 aa16.64■□□□□ 0.25
RPAIN-206ENST00000539417 UCHL3P15374 230 aa16.64■□□□□ 0.25
RPAIN-206ENST00000539417 CLCN1P35523 988 aa16.64■□□□□ 0.25
RPAIN-206ENST00000539417 GPC5P78333 572 aa16.64■□□□□ 0.25
RPAIN-206ENST00000539417 ZXDBP98169 803 aa16.64■□□□□ 0.25
RPAIN-206ENST00000539417 ARHGAP15Q53QZ3 475 aa16.64■□□□□ 0.25
RPAIN-206ENST00000539417 LCLAT1Q6UWP7 414 aa16.64■□□□□ 0.25
RPAIN-206ENST00000539417 MTSS1LQ765P7 747 aa16.64■□□□□ 0.25
RPAIN-206ENST00000539417 ENOSF1Q7L5Y1 443 aa16.64■□□□□ 0.25
RPAIN-206ENST00000539417 PIGZQ86VD9 579 aa16.64■□□□□ 0.25
RPAIN-206ENST00000539417 MON1AQ86VX9 555 aa16.64■□□□□ 0.25
RPAIN-206ENST00000539417 ARL14EPQ8N8R7 260 aaPredicted RBP16.64■□□□□ 0.25
RPAIN-206ENST00000539417 NDRG1Q92597 394 aaKnown RBP16.64■□□□□ 0.25
RPAIN-206ENST00000539417 MRPS31Q92665 395 aaKnown RBP16.64■□□□□ 0.25
RPAIN-206ENST00000539417 EDAQ92838 391 aa16.64■□□□□ 0.25
RPAIN-206ENST00000539417 FBXO32Q969P5 355 aa16.64■□□□□ 0.25
RPAIN-206ENST00000539417 ELSPBP1Q96BH3 223 aa16.64■□□□□ 0.25
RPAIN-206ENST00000539417 GCNAQ96QF7 691 aa16.64■□□□□ 0.25
RPAIN-206ENST00000539417 RNF38Q9H0F5 515 aa16.64■□□□□ 0.25
RPAIN-206ENST00000539417 TRPV4Q9HBA0 871 aa16.64■□□□□ 0.25
RPAIN-206ENST00000539417 FAM207AQ9NSI2 230 aaPredicted RBP16.64■□□□□ 0.25
RPAIN-206ENST00000539417 OSER1Q9NX31 292 aa16.64■□□□□ 0.25
RPAIN-206ENST00000539417 HEPACAM2A8MVW5 462 aa16.63■□□□□ 0.25
RPAIN-206ENST00000539417 ECI2O75521 394 aa16.63■□□□□ 0.25
RPAIN-206ENST00000539417 ABL1P00519 1130 aa16.63■□□□□ 0.25
RPAIN-206ENST00000539417 KIF11P52732 1056 aa16.63■□□□□ 0.25
RPAIN-206ENST00000539417 UBXN1Q04323 297 aa16.63■□□□□ 0.25
RPAIN-206ENST00000539417 RAPGEF1Q13905 1077 aa16.63■□□□□ 0.25
RPAIN-206ENST00000539417 DRAP1Q14919 205 aaPredicted RBP16.63■□□□□ 0.25
RPAIN-206ENST00000539417 CNGA2Q16280 664 aa16.63■□□□□ 0.25
RPAIN-206ENST00000539417 DENND1BQ6P3S1 775 aa16.63■□□□□ 0.25
RPAIN-206ENST00000539417 CMTM8Q8IZV2 173 aa16.63■□□□□ 0.25
RPAIN-206ENST00000539417 USP13Q92995 863 aaPredicted RBP16.63■□□□□ 0.25
RPAIN-206ENST00000539417 SECISBP2LQ93073 1101 aaKnown RBP16.63■□□□□ 0.25
RPAIN-206ENST00000539417 NMUR1Q9HB89 426 aa16.63■□□□□ 0.25
RPAIN-206ENST00000539417 ZFP14Q9HCL3 533 aa16.63■□□□□ 0.25
RPAIN-206ENST00000539417 TRPM5Q9NZQ8 1165 aa16.63■□□□□ 0.25
RPAIN-206ENST00000539417 KIAA1257Q9ULG3 409 aa16.63■□□□□ 0.25
RPAIN-206ENST00000539417 DUSP12Q9UNI6 340 aa16.63■□□□□ 0.25
RPAIN-206ENST00000539417 TECTAO75443 2155 aa16.63■□□□□ 0.25
RPAIN-206ENST00000539417 M0QYV0 167 aa16.62■□□□□ 0.25
RPAIN-206ENST00000539417 PIK3R2O00459 728 aa16.62■□□□□ 0.25
RPAIN-206ENST00000539417 RTN3O95197 1032 aaPredicted RBP16.62■□□□□ 0.25
RPAIN-206ENST00000539417 PDGFBP01127 241 aaPredicted RBP16.62■□□□□ 0.25
RPAIN-206ENST00000539417 ZDHHC11BP0C7U3 371 aa16.62■□□□□ 0.25
RPAIN-206ENST00000539417 TRIM21P19474 475 aaKnown RBP16.62■□□□□ 0.25
RPAIN-206ENST00000539417 RGS7P49802 495 aa16.62■□□□□ 0.25
RPAIN-206ENST00000539417 FKBP15Q5T1M5 1219 aa16.62■□□□□ 0.25
RPAIN-206ENST00000539417 ZNF606Q8WXB4 792 aa16.62■□□□□ 0.25
RPAIN-206ENST00000539417 NXPE3Q969Y0 559 aa16.62■□□□□ 0.25
RPAIN-206ENST00000539417 ASIC4Q96FT7 647 aa16.62■□□□□ 0.25
RPAIN-206ENST00000539417 PLCB1Q9NQ66 1216 aa16.62■□□□□ 0.25
RPAIN-206ENST00000539417 RTN4Q9NQC3 1192 aaKnown RBP16.62■□□□□ 0.25
RPAIN-206ENST00000539417 CYTH4Q9UIA0 394 aa16.62■□□□□ 0.25
RPAIN-206ENST00000539417 USP3Q9Y6I4 520 aa16.62■□□□□ 0.25
RPAIN-206ENST00000539417 XPO1O14980 1071 aaKnown RBP16.61■□□□□ 0.25
RPAIN-206ENST00000539417 ALADP13716 330 aa16.61■□□□□ 0.25
RPAIN-206ENST00000539417 GNA15P30679 374 aa16.61■□□□□ 0.25
RPAIN-206ENST00000539417 BCAT1P54687 386 aa16.61■□□□□ 0.25
RPAIN-206ENST00000539417 POLR2FP61218 127 aaKnown RBP16.61■□□□□ 0.25
RPAIN-206ENST00000539417 BST2Q10589 180 aaKnown RBP16.61■□□□□ 0.25
RPAIN-206ENST00000539417 RAB41Q5JT25 222 aa16.61■□□□□ 0.25
RPAIN-206ENST00000539417 PMF1Q6P1K2 205 aa16.61■□□□□ 0.25
RPAIN-206ENST00000539417 LRSAM1Q6UWE0 723 aa16.61■□□□□ 0.25
RPAIN-206ENST00000539417 BHLHA9Q7RTU4 235 aa16.61■□□□□ 0.25
RPAIN-206ENST00000539417 SCD5Q86SK9 330 aa16.61■□□□□ 0.25
RPAIN-206ENST00000539417 SLC47A2Q86VL8 602 aa16.61■□□□□ 0.25
RPAIN-206ENST00000539417 FAM71AQ8IYT1 594 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms