RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 RSPH1Q8WYR4 309 aa9.3□□□□□ -0.92
DDB1-213ENST00000539332 TOP1MTQ969P6 601 aa9.3□□□□□ -0.92
DDB1-213ENST00000539332 MCRS1Q96EZ8 462 aa9.3□□□□□ -0.92
DDB1-213ENST00000539332 RNPC3Q96LT9 517 aaKnown RBP9.3□□□□□ -0.92
DDB1-213ENST00000539332 HEXIM2Q96MH2 286 aaKnown RBP9.3□□□□□ -0.92
DDB1-213ENST00000539332 UROC1Q96N76 676 aa9.3□□□□□ -0.92
DDB1-213ENST00000539332 KLHL42Q9P2K6 505 aa9.3□□□□□ -0.92
DDB1-213ENST00000539332 TSPAN16Q9UKR8 245 aa9.3□□□□□ -0.92
DDB1-213ENST00000539332 GOLGA6L7A0A1B0GV03 622 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 SIGLEC16A6NMB1 481 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 TBKBP1A7MCY6 615 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 CCDC188H7C350 402 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 PSTPIP1O43586 416 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 SPOPO43791 374 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 DGKIO75912 1065 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 B3GAT3O94766 335 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 CALRP27797 417 aaKnown RBP9.29□□□□□ -0.92
DDB1-213ENST00000539332 DNA2P51530 1060 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 PDCLQ13371 301 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 PPP1R26Q5T8A7 1209 aaPredicted RBP9.29□□□□□ -0.92
DDB1-213ENST00000539332 DNAJC24Q6P3W2 148 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 KDM7AQ6ZMT4 941 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 ZNF365Q70YC5 407 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 TMCO2Q7Z6W1 182 aaPredicted RBP9.29□□□□□ -0.92
DDB1-213ENST00000539332 OSTM1Q86WC4 334 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 TTC30AQ86WT1 665 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 COLGALT2Q8IYK4 626 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 APPL2Q8NEU8 664 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 STK32AQ8WU08 396 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 FAM193BQ96PV7 902 aaPredicted RBP9.29□□□□□ -0.92
DDB1-213ENST00000539332 MRPL9Q9BYD2 267 aaKnown RBP9.29□□□□□ -0.92
DDB1-213ENST00000539332 ACTR5Q9H9F9 607 aaPredicted RBP9.29□□□□□ -0.92
DDB1-213ENST00000539332 CYLDQ9NQC7 956 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 DNAJB4Q9UDY4 337 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 IP6K2Q9UHH9 426 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 ZMYND8Q9ULU4 1186 aaPredicted RBP9.29□□□□□ -0.92
DDB1-213ENST00000539332 TNRC18O15417 2968 aaPredicted RBP9.29□□□□□ -0.92
DDB1-213ENST00000539332 CHD7Q9P2D1 2997 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 CHD9Q3L8U1 2897 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 TMEM110-MUSTN1A8MSY1 372 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 F8W810 466 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 HUS1O60921 280 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 FGBP02675 491 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 ERBB2P04626 1255 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 ITGB1P05556 798 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 ZNF16P17020 682 aaPredicted RBP9.29□□□□□ -0.92
DDB1-213ENST00000539332 RPL7AP62424 266 aaKnown RBP9.29□□□□□ -0.92
DDB1-213ENST00000539332 OGDHQ02218 1023 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 PAN2Q504Q3 1202 aaKnown RBP9.29□□□□□ -0.92
DDB1-213ENST00000539332 DCLRE1AQ6PJP8 1040 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 CD300LGQ6UXG3 332 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 ACOT1Q86TX2 421 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 PARP9Q8IXQ6 854 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 ADGRF2Q8IZF7 708 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 TMEM86AQ8N2M4 240 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 LRRC43Q8N309 656 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 ARFGAP2Q8N6H7 521 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 C12orf29Q8N999 325 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 MAGEC3Q8TD91 643 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 SLC35F5Q8WV83 523 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 DPF3Q92784 378 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 P3H4Q92791 437 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 C18orf8Q96DM3 657 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 SENP8Q96LD8 212 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 NAP1L3Q99457 506 aaPredicted RBP9.29□□□□□ -0.92
DDB1-213ENST00000539332 SLC4A5Q9BY07 1137 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 MIS12Q9H081 205 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 DPEP3Q9H4B8 488 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 NRDE2Q9H7Z3 1164 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 HCSTQ9UBK5 93 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 TJP2Q9UDY2 1190 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 CAPN7Q9Y6W3 813 aa9.29□□□□□ -0.92
DDB1-213ENST00000539332 KIAA1671Q9BY89 1806 aa9.28□□□□□ -0.92
DDB1-213ENST00000539332 A8MXQ7 604 aa9.28□□□□□ -0.92
DDB1-213ENST00000539332 I3L4J1 428 aa9.28□□□□□ -0.92
DDB1-213ENST00000539332 CYB561D2O14569 222 aa9.28□□□□□ -0.92
DDB1-213ENST00000539332 GJB6O95452 261 aa9.28□□□□□ -0.92
DDB1-213ENST00000539332 CYP11A1P05108 521 aa9.28□□□□□ -0.92
DDB1-213ENST00000539332 GNL1P36915 607 aaPredicted RBP9.28□□□□□ -0.92
DDB1-213ENST00000539332 SCNN1AP37088 669 aa9.28□□□□□ -0.92
DDB1-213ENST00000539332 FNTAP49354 379 aa9.28□□□□□ -0.92
DDB1-213ENST00000539332 CDR1P51861 262 aa9.28□□□□□ -0.92
DDB1-213ENST00000539332 RWDD2BP57060 319 aa9.28□□□□□ -0.92
DDB1-213ENST00000539332 GOLGA7BQ2TAP0 167 aa9.28□□□□□ -0.92
DDB1-213ENST00000539332 TIGD5Q53EQ6 642 aa9.28□□□□□ -0.92
DDB1-213ENST00000539332 TMEM240Q5SV17 173 aa9.28□□□□□ -0.92
DDB1-213ENST00000539332 CYP4A22Q5TCH4 519 aa9.28□□□□□ -0.92
DDB1-213ENST00000539332 LRRC38Q5VT99 294 aa9.28□□□□□ -0.92
DDB1-213ENST00000539332 FAM117BQ6P1L5 589 aa9.28□□□□□ -0.92
DDB1-213ENST00000539332 PSRC1Q6PGN9 363 aaPredicted RBP9.28□□□□□ -0.92
DDB1-213ENST00000539332 IFT20Q8IY31 132 aa9.28□□□□□ -0.92
DDB1-213ENST00000539332 MREGQ8N565 214 aa9.28□□□□□ -0.92
DDB1-213ENST00000539332 OR6B3Q8NGW1 331 aa9.28□□□□□ -0.92
DDB1-213ENST00000539332 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.28□□□□□ -0.92
DDB1-213ENST00000539332 HASPINQ8TF76 798 aa9.28□□□□□ -0.92
DDB1-213ENST00000539332 ZBTB9Q96C00 473 aa9.28□□□□□ -0.92
DDB1-213ENST00000539332 TNIP3Q96KP6 325 aa9.28□□□□□ -0.92
DDB1-213ENST00000539332 MCEEQ96PE7 176 aa9.28□□□□□ -0.92
DDB1-213ENST00000539332 DNAI2Q9GZS0 605 aa9.28□□□□□ -0.92
DDB1-213ENST00000539332 EPN3Q9H201 632 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms