RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 PCDH12Q9NPG4 1184 aa6.41□□□□□ -1.38
CCDC7-209ENST00000539197 COL4A3BPQ9Y5P4 624 aa6.41□□□□□ -1.38
CCDC7-209ENST00000539197 CNTNAP2Q9UHC6 1331 aa6.41□□□□□ -1.38
CCDC7-209ENST00000539197 BTBD19C9JJ37 291 aa6.4□□□□□ -1.38
CCDC7-209ENST00000539197 A1BGP04217 495 aa6.4□□□□□ -1.38
CCDC7-209ENST00000539197 PF4V1P10720 104 aa6.4□□□□□ -1.38
CCDC7-209ENST00000539197 NPR1P16066 1061 aa6.4□□□□□ -1.38
CCDC7-209ENST00000539197 VCAM1P19320 739 aa6.4□□□□□ -1.38
CCDC7-209ENST00000539197 CTBP1Q13363 440 aa6.4□□□□□ -1.38
CCDC7-209ENST00000539197 RBMS2Q15434 407 aaKnown RBP6.4□□□□□ -1.38
CCDC7-209ENST00000539197 TWIST1Q15672 202 aa6.4□□□□□ -1.38
CCDC7-209ENST00000539197 PLA1AQ53H76 456 aa6.4□□□□□ -1.38
CCDC7-209ENST00000539197 ATAT1Q5SQI0 421 aa6.4□□□□□ -1.38
CCDC7-209ENST00000539197 SFTPA1Q8IWL2 248 aa6.4□□□□□ -1.38
CCDC7-209ENST00000539197 RAPGEF4Q8WZA2 1011 aa6.4□□□□□ -1.38
CCDC7-209ENST00000539197 CHMP4CQ96CF2 233 aa6.4□□□□□ -1.38
CCDC7-209ENST00000539197 CCDC17Q96LX7 622 aa6.4□□□□□ -1.38
CCDC7-209ENST00000539197 GBA2Q9HCG7 927 aaPredicted RBP6.4□□□□□ -1.38
CCDC7-209ENST00000539197 AMFRQ9UKV5 643 aa6.4□□□□□ -1.38
CCDC7-209ENST00000539197 CADPSQ9ULU8 1353 aa6.4□□□□□ -1.39
CCDC7-209ENST00000539197 FGAP02671 866 aa6.39□□□□□ -1.39
CCDC7-209ENST00000539197 PRF1P14222 555 aa6.39□□□□□ -1.39
CCDC7-209ENST00000539197 SCP2P22307 547 aa6.39□□□□□ -1.39
CCDC7-209ENST00000539197 CCKARP32238 428 aa6.39□□□□□ -1.39
CCDC7-209ENST00000539197 PRKAG1P54619 331 aa6.39□□□□□ -1.39
CCDC7-209ENST00000539197 BPIFB1Q8TDL5 484 aa6.39□□□□□ -1.39
CCDC7-209ENST00000539197 PPP2R3CQ969Q6 453 aa6.39□□□□□ -1.39
CCDC7-209ENST00000539197 RSPRY1Q96DX4 576 aa6.39□□□□□ -1.39
CCDC7-209ENST00000539197 SLC12A5Q9H2X9 1139 aa6.39□□□□□ -1.39
CCDC7-209ENST00000539197 A0A087WWL8 130 aa6.38□□□□□ -1.39
CCDC7-209ENST00000539197 PSMD9O00233 223 aa6.38□□□□□ -1.39
CCDC7-209ENST00000539197 IGSF3O75054 1194 aa6.38□□□□□ -1.39
CCDC7-209ENST00000539197 CYP19A1P11511 503 aaPredicted RBP6.38□□□□□ -1.39
CCDC7-209ENST00000539197 PHKG2P15735 406 aa6.38□□□□□ -1.39
CCDC7-209ENST00000539197 C4orf46Q504U0 113 aa6.38□□□□□ -1.39
CCDC7-209ENST00000539197 C10orf25Q5T742 122 aa6.38□□□□□ -1.39
CCDC7-209ENST00000539197 GAS2L3Q86XJ1 694 aa6.38□□□□□ -1.39
CCDC7-209ENST00000539197 VCPIP1Q96JH7 1222 aa6.38□□□□□ -1.39
CCDC7-209ENST00000539197 HOMER2Q9NSB8 354 aa6.38□□□□□ -1.39
CCDC7-209ENST00000539197 PIH1D1Q9NWS0 290 aaKnown RBP6.38□□□□□ -1.39
CCDC7-209ENST00000539197 PI4KBQ9UBF8 816 aa6.38□□□□□ -1.39
CCDC7-209ENST00000539197 IGKV2D-30A0A075B6S6 120 aa6.37□□□□□ -1.39
CCDC7-209ENST00000539197 A0A088AWK7 358 aa6.37□□□□□ -1.39
CCDC7-209ENST00000539197 FAM90A10PA6NDY2 464 aa6.37□□□□□ -1.39
CCDC7-209ENST00000539197 CES2O00748 559 aa6.37□□□□□ -1.39
CCDC7-209ENST00000539197 RNF8O76064 485 aa6.37□□□□□ -1.39
CCDC7-209ENST00000539197 SUMO2P61956 95 aaKnown RBP6.37□□□□□ -1.39
CCDC7-209ENST00000539197 HTRA4P83105 476 aaPredicted RBP6.37□□□□□ -1.39
CCDC7-209ENST00000539197 FGL2Q14314 439 aa6.37□□□□□ -1.39
CCDC7-209ENST00000539197 MLC1Q15049 377 aa6.37□□□□□ -1.39
CCDC7-209ENST00000539197 SEC23BQ15437 767 aa6.37□□□□□ -1.39
CCDC7-209ENST00000539197 LMBRD2Q68DH5 695 aaPredicted RBP6.37□□□□□ -1.39
CCDC7-209ENST00000539197 PPP1R35Q8TAP8 253 aa6.37□□□□□ -1.39
CCDC7-209ENST00000539197 ZNF398Q8TD17 642 aa6.37□□□□□ -1.39
CCDC7-209ENST00000539197 PNISRQ8TF01 805 aaKnown RBP6.37□□□□□ -1.39
CCDC7-209ENST00000539197 DIS3LQ8TF46 1054 aaKnown RBP6.37□□□□□ -1.39
CCDC7-209ENST00000539197 HOOK2Q96ED9 719 aa6.37□□□□□ -1.39
CCDC7-209ENST00000539197 C1GALT1C1Q96EU7 318 aa6.37□□□□□ -1.39
CCDC7-209ENST00000539197 NUP88Q99567 741 aaPredicted RBP6.37□□□□□ -1.39
CCDC7-209ENST00000539197 TRIM54Q9BYV2 358 aa6.37□□□□□ -1.39
CCDC7-209ENST00000539197 MS4A7Q9GZW8 240 aaPredicted RBP6.37□□□□□ -1.39
CCDC7-209ENST00000539197 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.37□□□□□ -1.39
CCDC7-209ENST00000539197 LY6G6EA0A0G2JKS1 128 aa6.36□□□□□ -1.39
CCDC7-209ENST00000539197 BTN3A1O00481 513 aa6.36□□□□□ -1.39
CCDC7-209ENST00000539197 AP1G1O43747 822 aa6.36□□□□□ -1.39
CCDC7-209ENST00000539197 PMPCBO75439 489 aa6.36□□□□□ -1.39
CCDC7-209ENST00000539197 KITP10721 976 aa6.36□□□□□ -1.39
CCDC7-209ENST00000539197 NCLP19338 710 aaKnown RBP6.36□□□□□ -1.39
CCDC7-209ENST00000539197 GKP32189 559 aa6.36□□□□□ -1.39
CCDC7-209ENST00000539197 ARFIP2P53365 341 aa6.36□□□□□ -1.39
CCDC7-209ENST00000539197 COPB1P53618 953 aaKnown RBP6.36□□□□□ -1.39
CCDC7-209ENST00000539197 LMAN2Q12907 356 aa6.36□□□□□ -1.39
CCDC7-209ENST00000539197 IFIT1BQ5T764 474 aaKnown RBP6.36□□□□□ -1.39
CCDC7-209ENST00000539197 MPP5Q8N3R9 675 aa6.36□□□□□ -1.39
CCDC7-209ENST00000539197 OSR1Q8TAX0 266 aaPredicted RBP6.36□□□□□ -1.39
CCDC7-209ENST00000539197 TCF7L1Q9HCS4 588 aa6.36□□□□□ -1.39
CCDC7-209ENST00000539197 AASDHPPTQ9NRN7 309 aa6.36□□□□□ -1.39
CCDC7-209ENST00000539197 TMEM184CQ9NVA4 438 aa6.36□□□□□ -1.39
CCDC7-209ENST00000539197 ZSCAN32Q9NX65 697 aa6.36□□□□□ -1.39
CCDC7-209ENST00000539197 GABBR1Q9UBS5 961 aa6.36□□□□□ -1.39
CCDC7-209ENST00000539197 LRP12Q9Y561 859 aa6.36□□□□□ -1.39
CCDC7-209ENST00000539197 CCDC187A0A096LP49 1063 aa6.35□□□□□ -1.39
CCDC7-209ENST00000539197 MT-CO3P00414 261 aa6.35□□□□□ -1.39
CCDC7-209ENST00000539197 HTR1BP28222 390 aa6.35□□□□□ -1.39
CCDC7-209ENST00000539197 NEK2P51955 445 aa6.35□□□□□ -1.39
CCDC7-209ENST00000539197 MIDNQ504T8 468 aa6.35□□□□□ -1.39
CCDC7-209ENST00000539197 ZDHHC24Q6UX98 284 aa6.35□□□□□ -1.39
CCDC7-209ENST00000539197 RAB11FIP4Q86YS3 637 aa6.35□□□□□ -1.39
CCDC7-209ENST00000539197 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.35□□□□□ -1.39
CCDC7-209ENST00000539197 ADAMTS15Q8TE58 950 aa6.35□□□□□ -1.39
CCDC7-209ENST00000539197 MAP4K1Q92918 833 aa6.35□□□□□ -1.39
CCDC7-209ENST00000539197 SIGLEC11Q96RL6 698 aa6.35□□□□□ -1.39
CCDC7-209ENST00000539197 ZMAT3Q9HA38 289 aaKnown RBP6.35□□□□□ -1.39
CCDC7-209ENST00000539197 OFD1O75665 1012 aa6.34□□□□□ -1.39
CCDC7-209ENST00000539197 MYBP10242 640 aa6.34□□□□□ -1.39
CCDC7-209ENST00000539197 APEHP13798 732 aaKnown RBP6.34□□□□□ -1.39
CCDC7-209ENST00000539197 KRTAP10-7P60409 375 aaPredicted RBP6.34□□□□□ -1.39
CCDC7-209ENST00000539197 CERCAMQ5T4B2 595 aa6.34□□□□□ -1.39
CCDC7-209ENST00000539197 ZNF783Q6ZMS7 281 aa6.34□□□□□ -1.39
CCDC7-209ENST00000539197 KCTD20Q7Z5Y7 419 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms