RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 RTN2O75298 545 aa24.77■■□□□ 1.56
TMEM260-202ENST00000538838 ERBB2P04626 1255 aa24.77■■□□□ 1.56
TMEM260-202ENST00000538838 LCP1P13796 627 aa24.77■■□□□ 1.56
TMEM260-202ENST00000538838 ADIGQ0VDE8 80 aa24.77■■□□□ 1.56
TMEM260-202ENST00000538838 MTMR3Q13615 1198 aa24.77■■□□□ 1.56
TMEM260-202ENST00000538838 CYP4A22Q5TCH4 519 aa24.77■■□□□ 1.56
TMEM260-202ENST00000538838 MON1BQ7L1V2 547 aa24.77■■□□□ 1.56
TMEM260-202ENST00000538838 ERICH1Q86X53 443 aa24.77■■□□□ 1.56
TMEM260-202ENST00000538838 PHF13Q86YI8 300 aaPredicted RBP24.77■■□□□ 1.56
TMEM260-202ENST00000538838 SCAMP5Q8TAC9 235 aa24.77■■□□□ 1.56
TMEM260-202ENST00000538838 HSFY1Q96LI6 401 aa24.77■■□□□ 1.56
TMEM260-202ENST00000538838 EIF3CQ99613 913 aaKnown RBP24.77■■□□□ 1.56
TMEM260-202ENST00000538838 LRRC4Q9HBW1 653 aa24.77■■□□□ 1.56
TMEM260-202ENST00000538838 LINC01565O15544 149 aa24.76■■□□□ 1.55
TMEM260-202ENST00000538838 RFPL2O75678 378 aa24.76■■□□□ 1.55
TMEM260-202ENST00000538838 LCA5LO95447 670 aa24.76■■□□□ 1.55
TMEM260-202ENST00000538838 GLP2RO95838 553 aa24.76■■□□□ 1.55
TMEM260-202ENST00000538838 LRG1P02750 347 aa24.76■■□□□ 1.55
TMEM260-202ENST00000538838 FTLP02792 175 aaPredicted RBP24.76■■□□□ 1.55
TMEM260-202ENST00000538838 MMP8P22894 467 aa24.76■■□□□ 1.55
TMEM260-202ENST00000538838 RPL34P49207 117 aaKnown RBP24.76■■□□□ 1.55
TMEM260-202ENST00000538838 RAB41Q5JT25 222 aa24.76■■□□□ 1.55
TMEM260-202ENST00000538838 PPM1LQ5SGD2 360 aa24.76■■□□□ 1.55
TMEM260-202ENST00000538838 TOGARAM2Q6ZUX3 1019 aa24.76■■□□□ 1.55
TMEM260-202ENST00000538838 MICALL1Q8N3F8 863 aa24.76■■□□□ 1.55
TMEM260-202ENST00000538838 ACRBPQ8NEB7 543 aa24.76■■□□□ 1.55
TMEM260-202ENST00000538838 IPO4Q8TEX9 1081 aaKnown RBP24.76■■□□□ 1.55
TMEM260-202ENST00000538838 MYLIPQ8WY64 445 aa24.76■■□□□ 1.55
TMEM260-202ENST00000538838 DESI2Q9BSY9 194 aa24.76■■□□□ 1.55
TMEM260-202ENST00000538838 ISCUQ9H1K1 167 aa24.76■■□□□ 1.55
TMEM260-202ENST00000538838 SYNCQ9H7C4 482 aa24.76■■□□□ 1.55
TMEM260-202ENST00000538838 SLC38A8A6NNN8 435 aa24.75■■□□□ 1.55
TMEM260-202ENST00000538838 ZMYND10O75800 440 aa24.75■■□□□ 1.55
TMEM260-202ENST00000538838 TKTL1P51854 596 aa24.75■■□□□ 1.55
TMEM260-202ENST00000538838 USP46P62068 366 aa24.75■■□□□ 1.55
TMEM260-202ENST00000538838 PTP4A2Q12974 167 aa24.75■■□□□ 1.55
TMEM260-202ENST00000538838 PLD1Q13393 1074 aa24.75■■□□□ 1.55
TMEM260-202ENST00000538838 DENND5BQ6ZUT9 1274 aa24.75■■□□□ 1.55
TMEM260-202ENST00000538838 TMEM110Q86TL2 294 aa24.75■■□□□ 1.55
TMEM260-202ENST00000538838 NUP93Q8N1F7 819 aa24.75■■□□□ 1.55
TMEM260-202ENST00000538838 EFHBQ8N7U6 833 aa24.75■■□□□ 1.55
TMEM260-202ENST00000538838 MSANTD4Q8NCY6 345 aa24.75■■□□□ 1.55
TMEM260-202ENST00000538838 HDAC7Q8WUI4 952 aa24.75■■□□□ 1.55
TMEM260-202ENST00000538838 CYLDQ9NQC7 956 aa24.75■■□□□ 1.55
TMEM260-202ENST00000538838 ADAM22Q9P0K1 906 aa24.75■■□□□ 1.55
TMEM260-202ENST00000538838 OBSL1O75147 1896 aa24.75■■□□□ 1.55
TMEM260-202ENST00000538838 C2orf16Q68DN1 1984 aa24.75■■□□□ 1.55
TMEM260-202ENST00000538838 SPDYE4A6NLX3 237 aa24.75■■□□□ 1.55
TMEM260-202ENST00000538838 CCL16O15467 120 aa24.75■■□□□ 1.55
TMEM260-202ENST00000538838 ACADSBP45954 432 aa24.75■■□□□ 1.55
TMEM260-202ENST00000538838 EPHB3P54753 998 aa24.75■■□□□ 1.55
TMEM260-202ENST00000538838 VEPH1Q14D04 833 aa24.75■■□□□ 1.55
TMEM260-202ENST00000538838 MCOLN2Q8IZK6 566 aa24.75■■□□□ 1.55
TMEM260-202ENST00000538838 SIX6OS1Q8N1H7 587 aa24.75■■□□□ 1.55
TMEM260-202ENST00000538838 DEFB123Q8N688 67 aa24.75■■□□□ 1.55
TMEM260-202ENST00000538838 PACSIN1Q9BY11 444 aa24.75■■□□□ 1.55
TMEM260-202ENST00000538838 MIS12Q9H081 205 aa24.75■■□□□ 1.55
TMEM260-202ENST00000538838 DPP7Q9UHL4 492 aa24.75■■□□□ 1.55
TMEM260-202ENST00000538838 REXO2Q9Y3B8 237 aaKnown RBP24.75■■□□□ 1.55
TMEM260-202ENST00000538838 ABCB4P21439 1286 aa24.74■■□□□ 1.55
TMEM260-202ENST00000538838 SPA17Q15506 151 aa24.74■■□□□ 1.55
TMEM260-202ENST00000538838 PPP1R2P3Q6NXS1 205 aa24.74■■□□□ 1.55
TMEM260-202ENST00000538838 PHLDB2Q86SQ0 1253 aa24.74■■□□□ 1.55
TMEM260-202ENST00000538838 CLEC4CQ8WTT0 213 aa24.74■■□□□ 1.55
TMEM260-202ENST00000538838 CASP10Q92851 521 aa24.74■■□□□ 1.55
TMEM260-202ENST00000538838 C18orf8Q96DM3 657 aa24.74■■□□□ 1.55
TMEM260-202ENST00000538838 CDX2Q99626 313 aaPredicted RBP24.74■■□□□ 1.55
TMEM260-202ENST00000538838 ULBP1Q9BZM6 244 aa24.74■■□□□ 1.55
TMEM260-202ENST00000538838 PAPSS1O43252 624 aaPredicted RBP24.73■■□□□ 1.55
TMEM260-202ENST00000538838 ATMINO43313 823 aaPredicted RBP24.73■■□□□ 1.55
TMEM260-202ENST00000538838 IPO7O95373 1038 aaKnown RBP24.73■■□□□ 1.55
TMEM260-202ENST00000538838 GABRB2P47870 512 aa24.73■■□□□ 1.55
TMEM260-202ENST00000538838 C1QBPQ07021 282 aaKnown RBP24.73■■□□□ 1.55
TMEM260-202ENST00000538838 ELMSAN1Q6PJG2 1045 aa24.73■■□□□ 1.55
TMEM260-202ENST00000538838 FAM183BPQ6ZVS7 135 aa24.73■■□□□ 1.55
TMEM260-202ENST00000538838 SCUBE3Q8IX30 993 aa24.73■■□□□ 1.55
TMEM260-202ENST00000538838 FEZF2Q8TBJ5 459 aa24.73■■□□□ 1.55
TMEM260-202ENST00000538838 NDRG1Q92597 394 aaKnown RBP24.73■■□□□ 1.55
TMEM260-202ENST00000538838 CEP295NLQ96MC4 621 aa24.73■■□□□ 1.55
TMEM260-202ENST00000538838 GUCD1Q96NT3 240 aa24.73■■□□□ 1.55
TMEM260-202ENST00000538838 MAGED2Q9UNF1 606 aaPredicted RBP24.73■■□□□ 1.55
TMEM260-202ENST00000538838 CALB1P05937 261 aa24.72■■□□□ 1.55
TMEM260-202ENST00000538838 USP17L7P0C7H9 530 aa24.72■■□□□ 1.55
TMEM260-202ENST00000538838 CSH1P0DML2 217 aa24.72■■□□□ 1.55
TMEM260-202ENST00000538838 CSH2P0DML3 217 aa24.72■■□□□ 1.55
TMEM260-202ENST00000538838 HOXA9P31269 272 aa24.72■■□□□ 1.55
TMEM260-202ENST00000538838 GALCP54803 685 aa24.72■■□□□ 1.55
TMEM260-202ENST00000538838 RTL10Q7L3V2 364 aa24.72■■□□□ 1.55
TMEM260-202ENST00000538838 XYLT1Q86Y38 959 aa24.72■■□□□ 1.55
TMEM260-202ENST00000538838 C12orf76Q8N812 135 aaPredicted RBP24.72■■□□□ 1.55
TMEM260-202ENST00000538838 PSMG2Q969U7 264 aa24.72■■□□□ 1.55
TMEM260-202ENST00000538838 PIWIL1Q96J94 861 aaKnown RBP24.72■■□□□ 1.55
TMEM260-202ENST00000538838 THAP2Q9H0W7 228 aa24.72■■□□□ 1.55
TMEM260-202ENST00000538838 ZDHHC7Q9NXF8 308 aa24.72■■□□□ 1.55
TMEM260-202ENST00000538838 USP3Q9Y6I4 520 aa24.72■■□□□ 1.55
TMEM260-202ENST00000538838 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.72■■□□□ 1.55
TMEM260-202ENST00000538838 DOCK6Q96HP0 2047 aa24.72■■□□□ 1.55
TMEM260-202ENST00000538838 RTN3O95197 1032 aaPredicted RBP24.72■■□□□ 1.55
TMEM260-202ENST00000538838 HMGA1P17096 107 aaKnown RBP24.72■■□□□ 1.55
TMEM260-202ENST00000538838 OR6B2Q6IFH4 312 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms