RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 PAQR9Q6ZVX9 377 aa15.9■□□□□ 0.14
RAB40B-202ENST00000538809 INTS8Q75QN2 995 aaKnown RBP15.9■□□□□ 0.14
RAB40B-202ENST00000538809 ZBTB44Q8NCP5 570 aa15.9■□□□□ 0.14
RAB40B-202ENST00000538809 TAS1R2Q8TE23 839 aa15.9■□□□□ 0.14
RAB40B-202ENST00000538809 ATRIPQ8WXE1 791 aa15.9■□□□□ 0.14
RAB40B-202ENST00000538809 TNIP3Q96KP6 325 aa15.9■□□□□ 0.14
RAB40B-202ENST00000538809 KCNK16Q96T55 309 aa15.9■□□□□ 0.14
RAB40B-202ENST00000538809 APOBEC3GQ9HC16 384 aaKnown RBP15.9■□□□□ 0.14
RAB40B-202ENST00000538809 KRT82Q9NSB4 513 aa15.9■□□□□ 0.14
RAB40B-202ENST00000538809 FAM49BQ9NUQ9 324 aa15.9■□□□□ 0.14
RAB40B-202ENST00000538809 RMND1Q9NWS8 449 aa15.9■□□□□ 0.14
RAB40B-202ENST00000538809 C2orf42Q9NWW7 574 aa15.9■□□□□ 0.14
RAB40B-202ENST00000538809 DUS2Q9NX74 493 aaKnown RBP15.9■□□□□ 0.14
RAB40B-202ENST00000538809 ZNF840PA6NDX5 716 aa15.89■□□□□ 0.13
RAB40B-202ENST00000538809 AP1G2O75843 785 aa15.89■□□□□ 0.13
RAB40B-202ENST00000538809 HOXC13P31276 330 aa15.89■□□□□ 0.13
RAB40B-202ENST00000538809 PSMC2P35998 433 aaKnown RBP15.89■□□□□ 0.13
RAB40B-202ENST00000538809 ZXDBP98169 803 aa15.89■□□□□ 0.13
RAB40B-202ENST00000538809 DMWDQ09019 674 aa15.89■□□□□ 0.13
RAB40B-202ENST00000538809 PDGFRLQ15198 375 aa15.89■□□□□ 0.13
RAB40B-202ENST00000538809 FSTL4Q6MZW2 842 aa15.89■□□□□ 0.13
RAB40B-202ENST00000538809 PKN3Q6P5Z2 889 aa15.89■□□□□ 0.13
RAB40B-202ENST00000538809 FUKQ8N0W3 1084 aa15.89■□□□□ 0.13
RAB40B-202ENST00000538809 SPEM1Q8N4L4 309 aa15.89■□□□□ 0.13
RAB40B-202ENST00000538809 CPA6Q8N4T0 437 aa15.89■□□□□ 0.13
RAB40B-202ENST00000538809 SUMF1Q8NBK3 374 aa15.89■□□□□ 0.13
RAB40B-202ENST00000538809 OSCP1Q8WVF1 389 aa15.89■□□□□ 0.13
RAB40B-202ENST00000538809 TAF4BQ92750 862 aa15.89■□□□□ 0.13
RAB40B-202ENST00000538809 NELL1Q92832 810 aa15.89■□□□□ 0.13
RAB40B-202ENST00000538809 SMARCE1Q969G3 411 aa15.89■□□□□ 0.13
RAB40B-202ENST00000538809 FBXO32Q969P5 355 aa15.89■□□□□ 0.13
RAB40B-202ENST00000538809 SMARCD1Q96GM5 515 aa15.89■□□□□ 0.13
RAB40B-202ENST00000538809 SLITRK1Q96PX8 696 aa15.89■□□□□ 0.13
RAB40B-202ENST00000538809 IMPG2Q9BZV3 1241 aa15.89■□□□□ 0.13
RAB40B-202ENST00000538809 DMAP1Q9NPF5 467 aaPredicted RBP15.89■□□□□ 0.13
RAB40B-202ENST00000538809 EHD2Q9NZN4 543 aa15.89■□□□□ 0.13
RAB40B-202ENST00000538809 ARHGAP26Q9UNA1 814 aa15.89■□□□□ 0.13
RAB40B-202ENST00000538809 MYO18AQ92614 2054 aaKnown RBP15.89■□□□□ 0.13
RAB40B-202ENST00000538809 LEFTY2O00292 366 aa15.88■□□□□ 0.13
RAB40B-202ENST00000538809 SCAMP3O14828 347 aaKnown RBP15.88■□□□□ 0.13
RAB40B-202ENST00000538809 LILRB5O75023 590 aa15.88■□□□□ 0.13
RAB40B-202ENST00000538809 SMC2O95347 1197 aa15.88■□□□□ 0.13
RAB40B-202ENST00000538809 YWHAQP27348 245 aa15.88■□□□□ 0.13
RAB40B-202ENST00000538809 CXCL12P48061 93 aa15.88■□□□□ 0.13
RAB40B-202ENST00000538809 PDE6CP51160 858 aa15.88■□□□□ 0.13
RAB40B-202ENST00000538809 SLC5A3P53794 718 aa15.88■□□□□ 0.13
RAB40B-202ENST00000538809 PMS1P54277 932 aaKnown RBP15.88■□□□□ 0.13
RAB40B-202ENST00000538809 PPP2R5DQ14738 602 aa15.88■□□□□ 0.13
RAB40B-202ENST00000538809 EML3Q32P44 896 aa15.88■□□□□ 0.13
RAB40B-202ENST00000538809 NUP93Q8N1F7 819 aa15.88■□□□□ 0.13
RAB40B-202ENST00000538809 DCLK2Q8N568 766 aa15.88■□□□□ 0.13
RAB40B-202ENST00000538809 C12orf29Q8N999 325 aa15.88■□□□□ 0.13
RAB40B-202ENST00000538809 ZMIZ2Q8NF64 920 aa15.88■□□□□ 0.13
RAB40B-202ENST00000538809 SCAMP5Q8TAC9 235 aa15.88■□□□□ 0.13
RAB40B-202ENST00000538809 SLC2A14Q8TDB8 520 aa15.88■□□□□ 0.13
RAB40B-202ENST00000538809 ATP2A3Q93084 1043 aa15.88■□□□□ 0.13
RAB40B-202ENST00000538809 TWNKQ96RR1 684 aa15.88■□□□□ 0.13
RAB40B-202ENST00000538809 RNF38Q9H0F5 515 aa15.88■□□□□ 0.13
RAB40B-202ENST00000538809 ECT2Q9H8V3 914 aa15.88■□□□□ 0.13
RAB40B-202ENST00000538809 TMEM8AQ9HCN3 771 aa15.88■□□□□ 0.13
RAB40B-202ENST00000538809 SMPD4Q9NXE4 827 aa15.88■□□□□ 0.13
RAB40B-202ENST00000538809 SMG5Q9UPR3 1016 aaKnown RBP15.88■□□□□ 0.13
RAB40B-202ENST00000538809 CPQQ9Y646 472 aa15.88■□□□□ 0.13
RAB40B-202ENST00000538809 DMXL1Q9Y485 3027 aa15.87■□□□□ 0.13
RAB40B-202ENST00000538809 BEST1O76090 585 aa15.87■□□□□ 0.13
RAB40B-202ENST00000538809 RTN3O95197 1032 aaPredicted RBP15.87■□□□□ 0.13
RAB40B-202ENST00000538809 OAS1P00973 400 aaKnown RBP15.87■□□□□ 0.13
RAB40B-202ENST00000538809 EGFP01133 1207 aa15.87■□□□□ 0.13
RAB40B-202ENST00000538809 TCF3P15923 654 aa15.87■□□□□ 0.13
RAB40B-202ENST00000538809 CD58P19256 250 aa15.87■□□□□ 0.13
RAB40B-202ENST00000538809 ADORA2BP29275 332 aa15.87■□□□□ 0.13
RAB40B-202ENST00000538809 GJA4P35212 333 aa15.87■□□□□ 0.13
RAB40B-202ENST00000538809 GRSF1Q12849 480 aaKnown RBP eCLIP15.87■□□□□ 0.13
RAB40B-202ENST00000538809 TMEM196Q5HYL7 178 aa15.87■□□□□ 0.13
RAB40B-202ENST00000538809 HEATR6Q6AI08 1181 aaKnown RBP15.87■□□□□ 0.13
RAB40B-202ENST00000538809 MAMSTRQ6ZN01 415 aa15.87■□□□□ 0.13
RAB40B-202ENST00000538809 JAKMIP2Q96AA8 810 aa15.87■□□□□ 0.13
RAB40B-202ENST00000538809 SMOQ99835 787 aa15.87■□□□□ 0.13
RAB40B-202ENST00000538809 FAM126AQ9BYI3 521 aaPredicted RBP15.87■□□□□ 0.13
RAB40B-202ENST00000538809 GTPBP4Q9BZE4 634 aaKnown RBP15.87■□□□□ 0.13
RAB40B-202ENST00000538809 NIF3L1Q9GZT8 377 aa15.87■□□□□ 0.13
RAB40B-202ENST00000538809 LINC00597Q9H2U6 94 aa15.87■□□□□ 0.13
RAB40B-202ENST00000538809 FBRSL1Q9HCM7 1045 aaKnown RBP15.87■□□□□ 0.13
RAB40B-202ENST00000538809 MAN1B1Q9UKM7 699 aa15.87■□□□□ 0.13
RAB40B-202ENST00000538809 TRIM49BA6NDI0 452 aa15.86■□□□□ 0.13
RAB40B-202ENST00000538809 CHURC1-FNTBB4DL54 471 aa15.86■□□□□ 0.13
RAB40B-202ENST00000538809 K7ESF4 209 aa15.86■□□□□ 0.13
RAB40B-202ENST00000538809 TRDMT1O14717 391 aaKnown RBP15.86■□□□□ 0.13
RAB40B-202ENST00000538809 TNFRSF10BO14763 440 aa15.86■□□□□ 0.13
RAB40B-202ENST00000538809 OLFM2O95897 454 aa15.86■□□□□ 0.13
RAB40B-202ENST00000538809 EPB41P11171 864 aaKnown RBP15.86■□□□□ 0.13
RAB40B-202ENST00000538809 MBL2P11226 248 aaPredicted RBP15.86■□□□□ 0.13
RAB40B-202ENST00000538809 CD44P16070 742 aaKnown RBP15.86■□□□□ 0.13
RAB40B-202ENST00000538809 PFKLP17858 780 aa15.86■□□□□ 0.13
RAB40B-202ENST00000538809 BMP6P22004 513 aa15.86■□□□□ 0.13
RAB40B-202ENST00000538809 GTF2H1P32780 548 aa15.86■□□□□ 0.13
RAB40B-202ENST00000538809 PPP3CCP48454 512 aa15.86■□□□□ 0.13
RAB40B-202ENST00000538809 FNTBP49356 437 aa15.86■□□□□ 0.13
RAB40B-202ENST00000538809 MXI1P50539 228 aa15.86■□□□□ 0.13
RAB40B-202ENST00000538809 MAP3K7CLP57077 242 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms