RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 KRT77Q7Z794 578 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 RNF168Q8IYW5 571 aaPredicted RBP9.41□□□□□ -0.9
SNHG1-209ENST00000538654 LILRB2Q8N423 598 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 NMD3Q96D46 503 aaKnown RBP9.41□□□□□ -0.9
SNHG1-209ENST00000538654 ZFRQ96KR1 1074 aaKnown RBP9.41□□□□□ -0.9
SNHG1-209ENST00000538654 C7orf26Q96N11 449 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 Q9H521 79 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 ZNF408Q9H9D4 720 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 CDHR5Q9HBB8 845 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 RAB20Q9NX57 234 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 SNTG2Q9NY99 539 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 PLK2Q9NYY3 685 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 CNTN3Q9P232 1028 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 PPARGC1AQ9UBK2 798 aaKnown RBP9.41□□□□□ -0.9
SNHG1-209ENST00000538654 PPM1HQ9ULR3 514 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 ARHGAP10A1A4S6 786 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 C6orf229H3BNL8 230 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 EEF2P13639 858 aaKnown RBP9.41□□□□□ -0.9
SNHG1-209ENST00000538654 NSFP46459 744 aaKnown RBP9.41□□□□□ -0.9
SNHG1-209ENST00000538654 GPX6P59796 221 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 BPIFB4P59827 614 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 PDK3Q15120 406 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 TAF1CQ15572 869 aaPredicted RBP9.41□□□□□ -0.9
SNHG1-209ENST00000538654 HP1BP3Q5SSJ5 553 aaPredicted RBP9.41□□□□□ -0.9
SNHG1-209ENST00000538654 C1orf220Q5T0J3 134 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 KRT39Q6A163 491 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 BRINP3Q76B58 766 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 TTC7BQ86TV6 843 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 SATL1Q86VE3 508 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 TEX19Q8NA77 164 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 IQCGQ9H095 443 aaKnown RBP9.41□□□□□ -0.9
SNHG1-209ENST00000538654 ARMCX1Q9P291 453 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 SOX13Q9UN79 622 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 FAM50BQ9Y247 325 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 GAKO14976 1311 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 ARHGEF35A5YM69 484 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 ITGAVP06756 1048 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 BGNP21810 368 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 GLRA2P23416 452 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 HOXC13P31276 330 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 STIP1P31948 543 aaKnown RBP9.41□□□□□ -0.9
SNHG1-209ENST00000538654 ETV4P43268 484 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 CPA2P48052 419 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 PSMC1P62191 440 aaKnown RBP9.41□□□□□ -0.9
SNHG1-209ENST00000538654 NOP14P78316 857 aaKnown RBP9.41□□□□□ -0.9
SNHG1-209ENST00000538654 SLC18A2Q05940 514 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 ITPK1Q13572 414 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 TFDP1Q14186 410 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 C3orf62Q6ZUJ4 267 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 OTOP1Q7RTM1 612 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 USP37Q86T82 979 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 PALM2Q8IXS6 379 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 PPIL6Q8IXY8 311 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 ARL10Q8N8L6 244 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 ICA1LQ8NDH6 482 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 DCAKDQ8WVC6 231 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 TTC17Q96AE7 1141 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 CDHR1Q96JP9 859 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 FAM118BQ9BPY3 351 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 FHDC1Q9C0D6 1143 aaPredicted RBP9.41□□□□□ -0.9
SNHG1-209ENST00000538654 PCIF1Q9H4Z3 704 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 ACP6Q9NPH0 428 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 HSPBP1Q9NZL4 362 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 HSFX1Q9UBD0 423 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 SERPINB13Q9UIV8 391 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 DNPEPQ9ULA0 475 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 CHMP2BQ9UQN3 213 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 COQ4Q9Y3A0 265 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 IPPQ9Y573 584 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 FAM237BA0A1B0GVD1 139 aa9.4□□□□□ -0.9
SNHG1-209ENST00000538654 DENND3A2RUS2 1198 aa9.4□□□□□ -0.9
SNHG1-209ENST00000538654 ZNF862O60290 1169 aa9.4□□□□□ -0.9
SNHG1-209ENST00000538654 SPATA31D3P0C874 917 aa9.4□□□□□ -0.9
SNHG1-209ENST00000538654 CPA3P15088 417 aa9.4□□□□□ -0.9
SNHG1-209ENST00000538654 PRELPP51888 382 aa9.4□□□□□ -0.9
SNHG1-209ENST00000538654 VCPP55072 806 aaKnown RBP9.4□□□□□ -0.9
SNHG1-209ENST00000538654 C1orf228Q6PIY5 440 aa9.4□□□□□ -0.9
SNHG1-209ENST00000538654 SPATA31D4Q6ZUB0 917 aa9.4□□□□□ -0.9
SNHG1-209ENST00000538654 PRPF39Q86UA1 669 aaKnown RBP9.4□□□□□ -0.9
SNHG1-209ENST00000538654 ALYREFQ86V81 257 aaKnown RBP9.4□□□□□ -0.9
SNHG1-209ENST00000538654 ANKMY2Q8IV38 441 aa9.4□□□□□ -0.9
SNHG1-209ENST00000538654 PASD1Q8IV76 773 aa9.4□□□□□ -0.9
SNHG1-209ENST00000538654 MARCH10Q8NA82 808 aaPredicted RBP9.4□□□□□ -0.9
SNHG1-209ENST00000538654 RAB3IL1Q8TBN0 382 aa9.4□□□□□ -0.9
SNHG1-209ENST00000538654 NKD2Q969F2 451 aaPredicted RBP9.4□□□□□ -0.9
SNHG1-209ENST00000538654 VCPIP1Q96JH7 1222 aa9.4□□□□□ -0.9
SNHG1-209ENST00000538654 PRICKLE1Q96MT3 831 aaPredicted RBP9.4□□□□□ -0.9
SNHG1-209ENST00000538654 SIKE1Q9BRV8 207 aa9.4□□□□□ -0.9
SNHG1-209ENST00000538654 TMEM8AQ9HCN3 771 aa9.4□□□□□ -0.9
SNHG1-209ENST00000538654 RHBDL2Q9NX52 303 aa9.4□□□□□ -0.9
SNHG1-209ENST00000538654 CLUHO75153 1309 aa9.4□□□□□ -0.9
SNHG1-209ENST00000538654 GREB1LQ9C091 1923 aaPredicted RBP9.4□□□□□ -0.91
SNHG1-209ENST00000538654 GOLGA8RI6L899 631 aa9.4□□□□□ -0.91
SNHG1-209ENST00000538654 ATP6V1G1O75348 118 aa9.4□□□□□ -0.91
SNHG1-209ENST00000538654 USP1O94782 785 aa9.4□□□□□ -0.91
SNHG1-209ENST00000538654 CLPTM1O96005 669 aa9.4□□□□□ -0.91
SNHG1-209ENST00000538654 SERPINA6P08185 405 aa9.4□□□□□ -0.91
SNHG1-209ENST00000538654 KRT5P13647 590 aa9.4□□□□□ -0.91
SNHG1-209ENST00000538654 CD58P19256 250 aa9.4□□□□□ -0.91
SNHG1-209ENST00000538654 GTF2H1P32780 548 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms