RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 CDH6P55285 790 aa12.51□□□□□ -0.41
CPNE8-203ENST00000538596 KBTBD12Q3ZCT8 623 aa12.51□□□□□ -0.41
CPNE8-203ENST00000538596 MAP1SQ66K74 1059 aaPredicted RBP12.51□□□□□ -0.41
CPNE8-203ENST00000538596 EFCAB12Q6NXP0 572 aa12.51□□□□□ -0.41
CPNE8-203ENST00000538596 DARS2Q6PI48 645 aaKnown RBP12.51□□□□□ -0.41
CPNE8-203ENST00000538596 FBXO16Q8IX29 292 aaPredicted RBP12.51□□□□□ -0.41
CPNE8-203ENST00000538596 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.51□□□□□ -0.41
CPNE8-203ENST00000538596 PRR11Q96HE9 360 aaPredicted RBP12.51□□□□□ -0.41
CPNE8-203ENST00000538596 TBC1D10AQ9BXI6 508 aa12.51□□□□□ -0.41
CPNE8-203ENST00000538596 BCO2Q9BYV7 579 aa12.51□□□□□ -0.41
CPNE8-203ENST00000538596 RPF1Q9H9Y2 349 aaKnown RBP12.51□□□□□ -0.41
CPNE8-203ENST00000538596 GPATCH2LQ9NWQ4 482 aa12.51□□□□□ -0.41
CPNE8-203ENST00000538596 IGKV6-21A0A0C4DH24 114 aa12.5□□□□□ -0.41
CPNE8-203ENST00000538596 A0A0G2JND7 137 aa12.5□□□□□ -0.41
CPNE8-203ENST00000538596 TCRBV9S1A1TA0A576 114 aa12.5□□□□□ -0.41
CPNE8-203ENST00000538596 APOC4-APOC2K7ER74 178 aa12.5□□□□□ -0.41
CPNE8-203ENST00000538596 SOCS7O14512 581 aa12.5□□□□□ -0.41
CPNE8-203ENST00000538596 MCF2LO15068 1137 aa12.5□□□□□ -0.41
CPNE8-203ENST00000538596 USP2O75604 605 aaPredicted RBP12.5□□□□□ -0.41
CPNE8-203ENST00000538596 ZWINTO95229 277 aa12.5□□□□□ -0.41
CPNE8-203ENST00000538596 APOC2P02655 101 aa12.5□□□□□ -0.41
CPNE8-203ENST00000538596 ALDH3A1P30838 453 aa12.5□□□□□ -0.41
CPNE8-203ENST00000538596 FAAP100Q0VG06 881 aa12.5□□□□□ -0.41
CPNE8-203ENST00000538596 GADL1Q6ZQY3 521 aa12.5□□□□□ -0.41
CPNE8-203ENST00000538596 CYP4V2Q6ZWL3 525 aaPredicted RBP12.5□□□□□ -0.41
CPNE8-203ENST00000538596 PRPF39Q86UA1 669 aaKnown RBP12.5□□□□□ -0.41
CPNE8-203ENST00000538596 LONP2Q86WA8 852 aa12.5□□□□□ -0.41
CPNE8-203ENST00000538596 APOBEC3FQ8IUX4 373 aaKnown RBP12.5□□□□□ -0.41
CPNE8-203ENST00000538596 TTC13Q8NBP0 860 aa12.5□□□□□ -0.41
CPNE8-203ENST00000538596 FAM13CQ8NE31 585 aa12.5□□□□□ -0.41
CPNE8-203ENST00000538596 CMASQ8NFW8 434 aaPredicted RBP12.5□□□□□ -0.41
CPNE8-203ENST00000538596 CPB2Q96IY4 423 aa12.5□□□□□ -0.41
CPNE8-203ENST00000538596 HEXIM2Q96MH2 286 aaKnown RBP12.5□□□□□ -0.41
CPNE8-203ENST00000538596 ADPGKQ9BRR6 497 aa12.5□□□□□ -0.41
CPNE8-203ENST00000538596 FZD8Q9H461 694 aa12.5□□□□□ -0.41
CPNE8-203ENST00000538596 EFR3BQ9Y2G0 817 aa12.5□□□□□ -0.41
CPNE8-203ENST00000538596 MED7O43513 233 aa12.5□□□□□ -0.41
CPNE8-203ENST00000538596 DCTN3O75935 186 aa12.5□□□□□ -0.41
CPNE8-203ENST00000538596 RNF8O76064 485 aa12.5□□□□□ -0.41
CPNE8-203ENST00000538596 CYP3A5P20815 502 aa12.5□□□□□ -0.41
CPNE8-203ENST00000538596 GPD2P43304 727 aa12.5□□□□□ -0.41
CPNE8-203ENST00000538596 YWHAGP61981 247 aaKnown RBP eCLIP12.5□□□□□ -0.41
CPNE8-203ENST00000538596 MBTD1Q05BQ5 628 aa12.5□□□□□ -0.41
CPNE8-203ENST00000538596 NAA25Q14CX7 972 aa12.5□□□□□ -0.41
CPNE8-203ENST00000538596 SURF1Q15526 300 aa12.5□□□□□ -0.41
CPNE8-203ENST00000538596 RIOX2Q8IUF8 465 aa12.5□□□□□ -0.41
CPNE8-203ENST00000538596 C12orf29Q8N999 325 aa12.5□□□□□ -0.41
CPNE8-203ENST00000538596 FNIP1Q8TF40 1166 aa12.5□□□□□ -0.41
CPNE8-203ENST00000538596 SPATA33Q96N06 139 aa12.5□□□□□ -0.41
CPNE8-203ENST00000538596 TRIM56Q9BRZ2 755 aaKnown RBP12.5□□□□□ -0.41
CPNE8-203ENST00000538596 ZFP69BQ9UJL9 534 aa12.5□□□□□ -0.41
CPNE8-203ENST00000538596 LOC285556D6RIA3 1793 aa12.49□□□□□ -0.41
CPNE8-203ENST00000538596 A0A1B0GUA9 196 aa12.49□□□□□ -0.41
CPNE8-203ENST00000538596 EIF4E1BA6NMX2 242 aaKnown RBP12.49□□□□□ -0.41
CPNE8-203ENST00000538596 STAG3L1P0CL83 205 aa12.49□□□□□ -0.41
CPNE8-203ENST00000538596 PTK7Q13308 1070 aa12.49□□□□□ -0.41
CPNE8-203ENST00000538596 RASA2Q15283 850 aa12.49□□□□□ -0.41
CPNE8-203ENST00000538596 KLHL38Q2WGJ6 581 aa12.49□□□□□ -0.41
CPNE8-203ENST00000538596 CCDC33Q8N5R6 958 aa12.49□□□□□ -0.41
CPNE8-203ENST00000538596 CFAP36Q96G28 342 aa12.49□□□□□ -0.41
CPNE8-203ENST00000538596 TMEM176AQ96HP8 235 aa12.49□□□□□ -0.41
CPNE8-203ENST00000538596 FAM167AQ96KS9 214 aa12.49□□□□□ -0.41
CPNE8-203ENST00000538596 FAM111AQ96PZ2 611 aa12.49□□□□□ -0.41
CPNE8-203ENST00000538596 RNPEPQ9H4A4 650 aa12.49□□□□□ -0.41
CPNE8-203ENST00000538596 MANSC1Q9H8J5 431 aa12.49□□□□□ -0.41
CPNE8-203ENST00000538596 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.49□□□□□ -0.41
CPNE8-203ENST00000538596 WDR90Q96KV7 1748 aa12.49□□□□□ -0.41
CPNE8-203ENST00000538596 CILPO75339 1184 aa12.49□□□□□ -0.41
CPNE8-203ENST00000538596 MT-ND3P03897 115 aa12.49□□□□□ -0.41
CPNE8-203ENST00000538596 ATP2A2P16615 1042 aaKnown RBP12.49□□□□□ -0.41
CPNE8-203ENST00000538596 RGS7P49802 495 aa12.49□□□□□ -0.41
CPNE8-203ENST00000538596 ROR1Q01973 937 aa12.49□□□□□ -0.41
CPNE8-203ENST00000538596 SH3D19Q5HYK7 790 aa12.49□□□□□ -0.41
CPNE8-203ENST00000538596 CELF3Q5SZQ8 465 aaKnown RBP12.49□□□□□ -0.41
CPNE8-203ENST00000538596 GJC2Q5T442 439 aaPredicted RBP12.49□□□□□ -0.41
CPNE8-203ENST00000538596 CXorf38Q8TB03 319 aa12.49□□□□□ -0.41
CPNE8-203ENST00000538596 RXFP2Q8WXD0 754 aa12.49□□□□□ -0.41
CPNE8-203ENST00000538596 TTC17Q96AE7 1141 aa12.49□□□□□ -0.41
CPNE8-203ENST00000538596 MCRS1Q96EZ8 462 aa12.49□□□□□ -0.41
CPNE8-203ENST00000538596 RSRC1Q96IZ7 334 aaKnown RBP12.49□□□□□ -0.41
CPNE8-203ENST00000538596 FGD4Q96M96 766 aa12.49□□□□□ -0.41
CPNE8-203ENST00000538596 RAB3IPQ96QF0 476 aaPredicted RBP12.49□□□□□ -0.41
CPNE8-203ENST00000538596 LBHD1Q9BQE6 289 aaPredicted RBP12.49□□□□□ -0.41
CPNE8-203ENST00000538596 PDGFCQ9NRA1 345 aa12.49□□□□□ -0.41
CPNE8-203ENST00000538596 HEY1Q9Y5J3 304 aa12.49□□□□□ -0.41
CPNE8-203ENST00000538596 E5RJQ4 531 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 H0Y3Z8 333 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 H7C0C1 242 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 LPXNO60711 386 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 ENTPD5O75356 428 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 TGFB3P10600 412 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 PYGBP11216 843 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 PDGFRAP16234 1089 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 ATP5OP48047 213 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 ZC3H12AQ5D1E8 599 aaKnown RBP12.48□□□□□ -0.41
CPNE8-203ENST00000538596 OR6B2Q6IFH4 312 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 SCYL2Q6P3W7 929 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 CLNKQ7Z7G1 428 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 TTC8Q8TAM2 541 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 C2orf40Q9H1Z8 148 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms