RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 DLL1O00548 723 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 EREGO14944 169 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 TBX3O15119 743 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 TP73O15350 636 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 HNRNPRO43390 633 aaKnown RBP7.01□□□□□ -1.29
USP28-207ENST00000538475 NDUFB5O43674 189 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 BUD23O43709 281 aaKnown RBP7.01□□□□□ -1.29
USP28-207ENST00000538475 OPHN1O60890 802 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 STK10O94804 968 aaKnown RBP7.01□□□□□ -1.29
USP28-207ENST00000538475 CAMTA2O94983 1202 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 TNFAIP8O95379 198 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 STARD3NLO95772 234 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 GH1P01241 217 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 CYP1A2P05177 515 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 UBTFL6P0CB48 400 aaPredicted RBP7.01□□□□□ -1.29
USP28-207ENST00000538475 CDK4P11802 303 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 HARSP12081 509 aaKnown RBP7.01□□□□□ -1.29
USP28-207ENST00000538475 MYL4P12829 197 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 ZNF12P17014 697 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 CA4P22748 312 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 EIF4BP23588 611 aaKnown RBP7.01□□□□□ -1.29
USP28-207ENST00000538475 ACAT1P24752 427 aaKnown RBP7.01□□□□□ -1.29
USP28-207ENST00000538475 GTF2H1P32780 548 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 PHBP35232 272 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 MAGEA4P43358 317 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 IREB2P48200 963 aaKnown RBP7.01□□□□□ -1.29
USP28-207ENST00000538475 ITGA8P53708 1063 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 OXCT1P55809 520 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 NUP107P57740 925 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 NOP14P78316 857 aaKnown RBP7.01□□□□□ -1.29
USP28-207ENST00000538475 ZBTB16Q05516 673 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 CETN1Q12798 172 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 DNAJC3Q13217 504 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 THOC5Q13769 683 aaKnown RBP7.01□□□□□ -1.29
USP28-207ENST00000538475 UBE4AQ14139 1066 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 SEPT7Q16181 437 aaKnown RBP7.01□□□□□ -1.29
USP28-207ENST00000538475 SGO2Q562F6 1265 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 HERC4Q5GLZ8 1057 aaPredicted RBP7.01□□□□□ -1.29
USP28-207ENST00000538475 TMEM63BQ5T3F8 832 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 SYDE2Q5VT97 1194 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 PACS1Q6VY07 963 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 FAM47EQ6ZV65 393 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 OTUD6AQ7L8S5 288 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 HEATR3Q7Z4Q2 680 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 PCGF5Q86SE9 256 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 DHDDSQ86SQ9 333 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 RASSF3Q86WH2 238 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 CCDC25Q86WR0 208 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 KIAA0825Q8IV33 1275 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 SLFN12Q8IYM2 578 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 SCYL3Q8IZE3 742 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 TBCKQ8TEA7 893 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 WFDC12Q8WWY7 111 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 TP53INP1Q96A56 240 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 EEF2KMTQ96G04 330 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 CRAMP1Q96RY5 1269 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 POP1Q99575 1024 aaKnown RBP7.01□□□□□ -1.29
USP28-207ENST00000538475 CGREF1Q99674 301 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 HNRNPABQ99729 332 aaKnown RBP7.01□□□□□ -1.29
USP28-207ENST00000538475 HAUS8Q9BT25 410 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 MRPL18Q9H0U6 180 aaKnown RBP7.01□□□□□ -1.29
USP28-207ENST00000538475 CHRDQ9H2X0 955 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 UNC45AQ9H3U1 944 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 GOLPH3Q9H4A6 298 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 DNAJC18Q9H819 358 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 S100A14Q9HCY8 104 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 OLFML3Q9NRN5 406 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 METTL5Q9NRN9 209 aaKnown RBP7.01□□□□□ -1.29
USP28-207ENST00000538475 ARL8BQ9NVJ2 186 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 SPATA7Q9P0W8 599 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 GCNT4Q9P109 453 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 PSMC3IPQ9P2W1 217 aaPredicted RBP7.01□□□□□ -1.29
USP28-207ENST00000538475 HEY2Q9UBP5 337 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 SEL1LQ9UBV2 794 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 APEX2Q9UBZ4 518 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 ASIC3Q9UHC3 531 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 TAGLN3Q9UI15 199 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 FOXD3Q9UJU5 478 aaPredicted RBP7.01□□□□□ -1.29
USP28-207ENST00000538475 GTF3C4Q9UKN8 822 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 ASAP1Q9ULH1 1129 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 FADS3Q9Y5Q0 445 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7□□□□□ -1.29
USP28-207ENST00000538475 SPECC1L-ADORA2AF8WAN1 911 aa7□□□□□ -1.29
USP28-207ENST00000538475 ALOX15BO15296 676 aa7□□□□□ -1.29
USP28-207ENST00000538475 FAM189A1O60320 539 aa7□□□□□ -1.29
USP28-207ENST00000538475 CCNT2O60583 730 aaKnown RBP7□□□□□ -1.29
USP28-207ENST00000538475 CLPTM1O96005 669 aa7□□□□□ -1.29
USP28-207ENST00000538475 NR3C1P04150 777 aa7□□□□□ -1.29
USP28-207ENST00000538475 ALDH2P05091 517 aa7□□□□□ -1.29
USP28-207ENST00000538475 KRT18P05783 430 aaKnown RBP7□□□□□ -1.29
USP28-207ENST00000538475 PLA2G4BP0C869 781 aa7□□□□□ -1.29
USP28-207ENST00000538475 DHRS4L1P0CG22 281 aa7□□□□□ -1.29
USP28-207ENST00000538475 MYBL1P10243 752 aa7□□□□□ -1.29
USP28-207ENST00000538475 EDN3P14138 238 aa7□□□□□ -1.29
USP28-207ENST00000538475 ACPPP15309 386 aa7□□□□□ -1.29
USP28-207ENST00000538475 CREB1P16220 341 aa7□□□□□ -1.29
USP28-207ENST00000538475 ZNF24P17028 368 aa7□□□□□ -1.29
USP28-207ENST00000538475 KCNA6P17658 529 aa7□□□□□ -1.29
USP28-207ENST00000538475 VCLP18206 1134 aa7□□□□□ -1.29
USP28-207ENST00000538475 S100A1P23297 94 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms