RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 TTLL3Q9Y4R7 772 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 ZNFX1Q9P2E3 1918 aaKnown RBP9.11□□□□□ -0.95
UBE3B-208ENST00000538070 CCDC195A0A1B0GUA6 201 aa9.1□□□□□ -0.95
UBE3B-208ENST00000538070 CCDC78A2IDD5 438 aa9.1□□□□□ -0.95
UBE3B-208ENST00000538070 SMPD1P17405 629 aa9.1□□□□□ -0.95
UBE3B-208ENST00000538070 ELK3P41970 407 aa9.1□□□□□ -0.95
UBE3B-208ENST00000538070 NME3Q13232 169 aa9.1□□□□□ -0.95
UBE3B-208ENST00000538070 SPATA21Q7Z572 469 aa9.1□□□□□ -0.95
UBE3B-208ENST00000538070 FAM131BQ86XD5 332 aa9.1□□□□□ -0.95
UBE3B-208ENST00000538070 NME8Q8N427 588 aa9.1□□□□□ -0.95
UBE3B-208ENST00000538070 CCNYQ8ND76 341 aa9.1□□□□□ -0.95
UBE3B-208ENST00000538070 MED10Q9BTT4 135 aa9.1□□□□□ -0.95
UBE3B-208ENST00000538070 RNF39Q9H2S5 420 aa9.1□□□□□ -0.95
UBE3B-208ENST00000538070 KLHL14Q9P2G3 628 aa9.1□□□□□ -0.95
UBE3B-208ENST00000538070 USP15Q9Y4E8 981 aaPredicted RBP9.1□□□□□ -0.95
UBE3B-208ENST00000538070 FAM47DPA6NHR8 397 aa9.1□□□□□ -0.95
UBE3B-208ENST00000538070 EIF4E1BA6NMX2 242 aaKnown RBP9.1□□□□□ -0.95
UBE3B-208ENST00000538070 CREB3O43889 395 aa9.1□□□□□ -0.95
UBE3B-208ENST00000538070 CILPO75339 1184 aa9.1□□□□□ -0.95
UBE3B-208ENST00000538070 TMEM63AO94886 807 aa9.1□□□□□ -0.95
UBE3B-208ENST00000538070 CYP3A5P20815 502 aa9.1□□□□□ -0.95
UBE3B-208ENST00000538070 FOXN2P32314 431 aa9.1□□□□□ -0.95
UBE3B-208ENST00000538070 CRADDP78560 199 aa9.1□□□□□ -0.95
UBE3B-208ENST00000538070 TNFAIP2Q03169 654 aa9.1□□□□□ -0.95
UBE3B-208ENST00000538070 LVRNQ6Q4G3 990 aa9.1□□□□□ -0.95
UBE3B-208ENST00000538070 GPATCH11Q8N954 259 aa9.1□□□□□ -0.95
UBE3B-208ENST00000538070 ZMAT2Q96NC0 199 aaKnown RBP9.1□□□□□ -0.95
UBE3B-208ENST00000538070 ECT2Q9H8V3 914 aa9.1□□□□□ -0.95
UBE3B-208ENST00000538070 TMPRSS4Q9NRS4 437 aa9.1□□□□□ -0.95
UBE3B-208ENST00000538070 MYO18AQ92614 2054 aaKnown RBP9.1□□□□□ -0.95
UBE3B-208ENST00000538070 CLDN5O00501 218 aa9.1□□□□□ -0.95
UBE3B-208ENST00000538070 TSPAN1O60635 241 aa9.1□□□□□ -0.95
UBE3B-208ENST00000538070 F7P08709 466 aaPredicted RBP9.1□□□□□ -0.95
UBE3B-208ENST00000538070 LMO2P25791 158 aa9.1□□□□□ -0.95
UBE3B-208ENST00000538070 RBL1P28749 1068 aa9.1□□□□□ -0.95
UBE3B-208ENST00000538070 BMPR2Q13873 1038 aa9.1□□□□□ -0.95
UBE3B-208ENST00000538070 TWF2Q6IBS0 349 aaKnown RBP9.1□□□□□ -0.95
UBE3B-208ENST00000538070 CTU1Q7Z7A3 348 aaKnown RBP9.1□□□□□ -0.95
UBE3B-208ENST00000538070 CPT1BQ92523 772 aa9.1□□□□□ -0.95
UBE3B-208ENST00000538070 KLHL29Q96CT2 875 aa9.1□□□□□ -0.95
UBE3B-208ENST00000538070 SYT17Q9BSW7 474 aa9.1□□□□□ -0.95
UBE3B-208ENST00000538070 IQCGQ9H095 443 aaKnown RBP9.1□□□□□ -0.95
UBE3B-208ENST00000538070 PTPRHQ9HD43 1115 aa9.1□□□□□ -0.95
UBE3B-208ENST00000538070 BARX2Q9UMQ3 279 aaPredicted RBP9.1□□□□□ -0.95
UBE3B-208ENST00000538070 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.1□□□□□ -0.95
UBE3B-208ENST00000538070 A0A0G2JND7 137 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 A6NJR5 290 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 LGR5O75473 907 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 RECQL4O94761 1208 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 TRUB2O95900 331 aaKnown RBP9.09□□□□□ -0.95
UBE3B-208ENST00000538070 RPSAP08865 295 aaKnown RBP9.09□□□□□ -0.95
UBE3B-208ENST00000538070 GPD2P43304 727 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 SLC1A5Q15758 541 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 ZNF484Q5JVG2 852 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 EXOC8Q8IYI6 725 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 RMDN2Q96LZ7 410 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 ZNF518BQ9C0D4 1074 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 SNX25Q9H3E2 840 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 NPHS2Q9NP85 383 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 GAS2O43903 313 aaKnown RBP9.09□□□□□ -0.95
UBE3B-208ENST00000538070 MT-ND3P03897 115 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 INHBAP08476 426 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 VDRP11473 427 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 ADRA1DP25100 572 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 WDR4P57081 412 aaKnown RBP9.09□□□□□ -0.95
UBE3B-208ENST00000538070 KCNJ2P63252 427 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 SLC25A11Q02978 314 aaKnown RBP9.09□□□□□ -0.95
UBE3B-208ENST00000538070 ZBTB16Q05516 673 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 TAPT1Q6NXT6 567 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 PPIL6Q8IXY8 311 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 PYROXD2Q8N2H3 581 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 PRCCQ92733 491 aaPredicted RBP9.09□□□□□ -0.95
UBE3B-208ENST00000538070 PAFAH2Q99487 392 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 SGIP1Q9BQI5 828 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 MFHAS1Q9Y4C4 1052 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 IGKV6-21A0A0C4DH24 114 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 KBTBD13C9JR72 458 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 MAGEB2O15479 319 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 SNX3O60493 162 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 KITP10721 976 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 MCF2P10911 925 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 TAP1Q03518 808 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 RNASEH2BQ5TBB1 312 aaKnown RBP9.09□□□□□ -0.95
UBE3B-208ENST00000538070 TRNP1Q6NT89 227 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 C6orf89Q6UWU4 347 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.09□□□□□ -0.95
UBE3B-208ENST00000538070 IGDCC3Q8IVU1 814 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 ATXN7L3BQ96GX2 97 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 PCDH9Q9HC56 1237 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 IL1RAPL1Q9NZN1 696 aa9.09□□□□□ -0.95
UBE3B-208ENST00000538070 DESP17661 470 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 IGFBP6P24592 240 aaPredicted RBP9.08□□□□□ -0.96
UBE3B-208ENST00000538070 PHBP35232 272 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 SESN2P58004 480 aaPredicted RBP9.08□□□□□ -0.96
UBE3B-208ENST00000538070 ACVR2BQ13705 512 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 DPYSL3Q14195 570 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 MORF4L2Q15014 288 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 OASLQ15646 514 aaKnown RBP9.08□□□□□ -0.96
UBE3B-208ENST00000538070 DCAF6Q58WW2 860 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 GPR142Q7Z601 462 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms