RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 TMEM30AQ9NV96 361 aa12.98□□□□□ -0.33
DDB1-209ENST00000537877 ABI2Q9NYB9 513 aaPredicted RBP12.98□□□□□ -0.33
DDB1-209ENST00000537877 CDC23Q9UJX2 597 aa12.98□□□□□ -0.33
DDB1-209ENST00000537877 MRFAP1Q9Y605 127 aa12.98□□□□□ -0.33
DDB1-209ENST00000537877 MTMR11A4FU01 709 aa12.97□□□□□ -0.33
DDB1-209ENST00000537877 CES2O00748 559 aa12.97□□□□□ -0.33
DDB1-209ENST00000537877 TRIM66O15016 1216 aa12.97□□□□□ -0.33
DDB1-209ENST00000537877 NCK2O43639 380 aa12.97□□□□□ -0.33
DDB1-209ENST00000537877 FGF18O76093 207 aa12.97□□□□□ -0.33
DDB1-209ENST00000537877 GJB6O95452 261 aa12.97□□□□□ -0.33
DDB1-209ENST00000537877 GLI1P08151 1106 aa12.97□□□□□ -0.33
DDB1-209ENST00000537877 LCP1P13796 627 aa12.97□□□□□ -0.33
DDB1-209ENST00000537877 DESP17661 470 aa12.97□□□□□ -0.33
DDB1-209ENST00000537877 COMTP21964 271 aa12.97□□□□□ -0.33
DDB1-209ENST00000537877 CTNNA2P26232 953 aa12.97□□□□□ -0.33
DDB1-209ENST00000537877 RFC1P35251 1148 aaPredicted RBP12.97□□□□□ -0.33
DDB1-209ENST00000537877 MAGEA10P43363 369 aaPredicted RBP12.97□□□□□ -0.33
DDB1-209ENST00000537877 TKTL1P51854 596 aa12.97□□□□□ -0.33
DDB1-209ENST00000537877 CACNA2D1P54289 1103 aa12.97□□□□□ -0.33
DDB1-209ENST00000537877 ACAP1Q15027 740 aa12.97□□□□□ -0.33
DDB1-209ENST00000537877 WHAMMP3Q1A5X7 153 aa12.97□□□□□ -0.33
DDB1-209ENST00000537877 EFHC1Q5JVL4 640 aa12.97□□□□□ -0.33
DDB1-209ENST00000537877 UBL4BQ8N7F7 174 aa12.97□□□□□ -0.33
DDB1-209ENST00000537877 JOSD2Q8TAC2 188 aa12.97□□□□□ -0.33
DDB1-209ENST00000537877 CD101Q93033 1021 aa12.97□□□□□ -0.33
DDB1-209ENST00000537877 C8orf48Q96LL4 319 aa12.97□□□□□ -0.33
DDB1-209ENST00000537877 RNPC3Q96LT9 517 aaKnown RBP12.97□□□□□ -0.33
DDB1-209ENST00000537877 OSBPL9Q96SU4 736 aa12.97□□□□□ -0.33
DDB1-209ENST00000537877 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.97□□□□□ -0.33
DDB1-209ENST00000537877 ASNSD1Q9NWL6 643 aa12.97□□□□□ -0.33
DDB1-209ENST00000537877 TMEM59LQ9UK28 342 aa12.97□□□□□ -0.33
DDB1-209ENST00000537877 SSX2IPQ9Y2D8 614 aa12.97□□□□□ -0.33
DDB1-209ENST00000537877 CDY1Q9Y6F8 540 aa12.97□□□□□ -0.33
DDB1-209ENST00000537877 CCDC66A2RUB6 948 aa12.96□□□□□ -0.33
DDB1-209ENST00000537877 C2CD4BA6NLJ0 364 aa12.96□□□□□ -0.33
DDB1-209ENST00000537877 F8VP50 259 aa12.96□□□□□ -0.33
DDB1-209ENST00000537877 PIK3R2O00459 728 aa12.96□□□□□ -0.33
DDB1-209ENST00000537877 DPYSL4O14531 572 aa12.96□□□□□ -0.33
DDB1-209ENST00000537877 HSF2BPO75031 334 aa12.96□□□□□ -0.33
DDB1-209ENST00000537877 GPD1P21695 349 aa12.96□□□□□ -0.33
DDB1-209ENST00000537877 CYP2F1P24903 491 aa12.96□□□□□ -0.33
DDB1-209ENST00000537877 CTNNA1P35221 906 aaKnown RBP12.96□□□□□ -0.33
DDB1-209ENST00000537877 GRIK1P39086 918 aa12.96□□□□□ -0.33
DDB1-209ENST00000537877 MRPS5P82675 430 aaKnown RBP12.96□□□□□ -0.33
DDB1-209ENST00000537877 ROR1Q01973 937 aa12.96□□□□□ -0.33
DDB1-209ENST00000537877 ADCY1Q08828 1119 aa12.96□□□□□ -0.33
DDB1-209ENST00000537877 ZNF252P-AS1Q0IIN9 211 aa12.96□□□□□ -0.33
DDB1-209ENST00000537877 RSPO2Q6UXX9 243 aaPredicted RBP12.96□□□□□ -0.33
DDB1-209ENST00000537877 SCUBE3Q8IX30 993 aa12.96□□□□□ -0.33
DDB1-209ENST00000537877 VPS52Q8N1B4 723 aa12.96□□□□□ -0.33
DDB1-209ENST00000537877 IRGQQ8WZA9 623 aa12.96□□□□□ -0.33
DDB1-209ENST00000537877 PIWIL1Q96J94 861 aaKnown RBP12.96□□□□□ -0.33
DDB1-209ENST00000537877 CEP295NLQ96MC4 621 aa12.96□□□□□ -0.33
DDB1-209ENST00000537877 KCNK16Q96T55 309 aa12.96□□□□□ -0.33
DDB1-209ENST00000537877 PLVAPQ9BX97 442 aa12.96□□□□□ -0.33
DDB1-209ENST00000537877 ULBP1Q9BZM6 244 aa12.96□□□□□ -0.33
DDB1-209ENST00000537877 ZBP1Q9H171 429 aa12.96□□□□□ -0.33
DDB1-209ENST00000537877 HSFX1Q9UBD0 423 aa12.96□□□□□ -0.33
DDB1-209ENST00000537877 PACSIN2Q9UNF0 486 aaPredicted RBP12.96□□□□□ -0.33
DDB1-209ENST00000537877 LZTS1Q9Y250 596 aa12.96□□□□□ -0.33
DDB1-209ENST00000537877 PLXNA4Q9HCM2 1894 aa12.96□□□□□ -0.34
DDB1-209ENST00000537877 LCHNA4D1U4 455 aa12.95□□□□□ -0.34
DDB1-209ENST00000537877 DDX3YO15523 660 aaKnown RBP12.95□□□□□ -0.34
DDB1-209ENST00000537877 PSTPIP1O43586 416 aa12.95□□□□□ -0.34
DDB1-209ENST00000537877 DAB1O75553 588 aa12.95□□□□□ -0.34
DDB1-209ENST00000537877 CTSAP10619 480 aa12.95□□□□□ -0.34
DDB1-209ENST00000537877 PSMA2P25787 234 aa12.95□□□□□ -0.34
DDB1-209ENST00000537877 CTNNB1P35222 781 aa12.95□□□□□ -0.34
DDB1-209ENST00000537877 BMPR1AP36894 532 aa12.95□□□□□ -0.34
DDB1-209ENST00000537877 ZNF143P52747 638 aaPredicted RBP12.95□□□□□ -0.34
DDB1-209ENST00000537877 ARPP19P56211 112 aa12.95□□□□□ -0.34
DDB1-209ENST00000537877 DAOAP59103 153 aa12.95□□□□□ -0.34
DDB1-209ENST00000537877 OGDHQ02218 1023 aa12.95□□□□□ -0.34
DDB1-209ENST00000537877 C9orf50Q5SZB4 431 aa12.95□□□□□ -0.34
DDB1-209ENST00000537877 TPGS2Q68CL5 300 aa12.95□□□□□ -0.34
DDB1-209ENST00000537877 RNF19BQ6ZMZ0 732 aa12.95□□□□□ -0.34
DDB1-209ENST00000537877 GPRIN1Q7Z2K8 1008 aa12.95□□□□□ -0.34
DDB1-209ENST00000537877 SCN4BQ8IWT1 228 aa12.95□□□□□ -0.34
DDB1-209ENST00000537877 TNS4Q8IZW8 715 aa12.95□□□□□ -0.34
DDB1-209ENST00000537877 EMC1Q8N766 993 aa12.95□□□□□ -0.34
DDB1-209ENST00000537877 PBKQ96KB5 322 aa12.95□□□□□ -0.34
DDB1-209ENST00000537877 SAMD11Q96NU1 681 aa12.95□□□□□ -0.34
DDB1-209ENST00000537877 NCAPGQ9BPX3 1015 aa12.95□□□□□ -0.34
DDB1-209ENST00000537877 CNPY3Q9BT09 278 aa12.95□□□□□ -0.34
DDB1-209ENST00000537877 TRIM62Q9BVG3 475 aa12.95□□□□□ -0.34
DDB1-209ENST00000537877 CARD9Q9H257 536 aa12.95□□□□□ -0.34
DDB1-209ENST00000537877 MRPL17Q9NRX2 175 aaKnown RBP12.95□□□□□ -0.34
DDB1-209ENST00000537877 FNIP2Q9P278 1114 aa12.95□□□□□ -0.34
DDB1-209ENST00000537877 RNF14Q9UBS8 474 aa12.95□□□□□ -0.34
DDB1-209ENST00000537877 AFF4Q9UHB7 1163 aaKnown RBP12.95□□□□□ -0.34
DDB1-209ENST00000537877 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.95□□□□□ -0.34
DDB1-209ENST00000537877 COL4A4P53420 1690 aaPredicted RBP12.95□□□□□ -0.34
DDB1-209ENST00000537877 PLXNA3P51805 1871 aa12.95□□□□□ -0.34
DDB1-209ENST00000537877 WDR27A2RRH5 827 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 LINC01553A4QN01 128 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 C2CD2LO14523 706 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 KCNK3O14649 394 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 RNF8O76064 485 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 ZBED1O96006 694 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 HAPLN1P10915 354 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms