RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 DSCR3O14972 297 aa6.37□□□□□ -1.39
CCDC7-208ENST00000537047 GCATO75600 419 aa6.37□□□□□ -1.39
CCDC7-208ENST00000537047 CYP2C9P11712 490 aa6.37□□□□□ -1.39
CCDC7-208ENST00000537047 WNT3P56703 355 aa6.37□□□□□ -1.39
CCDC7-208ENST00000537047 RAPGEF1Q13905 1077 aa6.37□□□□□ -1.39
CCDC7-208ENST00000537047 FGL2Q14314 439 aa6.37□□□□□ -1.39
CCDC7-208ENST00000537047 MLC1Q15049 377 aa6.37□□□□□ -1.39
CCDC7-208ENST00000537047 SEC23BQ15437 767 aa6.37□□□□□ -1.39
CCDC7-208ENST00000537047 KRTAP5-11Q6L8G4 156 aa6.37□□□□□ -1.39
CCDC7-208ENST00000537047 MTHFD1LQ6UB35 978 aa6.37□□□□□ -1.39
CCDC7-208ENST00000537047 GAS2L3Q86XJ1 694 aa6.37□□□□□ -1.39
CCDC7-208ENST00000537047 PPP1R35Q8TAP8 253 aa6.37□□□□□ -1.39
CCDC7-208ENST00000537047 ADAMTS18Q8TE60 1221 aa6.37□□□□□ -1.39
CCDC7-208ENST00000537047 PNISRQ8TF01 805 aaKnown RBP6.37□□□□□ -1.39
CCDC7-208ENST00000537047 DIS3LQ8TF46 1054 aaKnown RBP6.37□□□□□ -1.39
CCDC7-208ENST00000537047 HOOK2Q96ED9 719 aa6.37□□□□□ -1.39
CCDC7-208ENST00000537047 TRIM54Q9BYV2 358 aa6.37□□□□□ -1.39
CCDC7-208ENST00000537047 MS4A7Q9GZW8 240 aaPredicted RBP6.37□□□□□ -1.39
CCDC7-208ENST00000537047 TFCP2L1Q9NZI6 479 aa6.37□□□□□ -1.39
CCDC7-208ENST00000537047 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.37□□□□□ -1.39
CCDC7-208ENST00000537047 LY6G6EA0A0G2JKS1 128 aa6.36□□□□□ -1.39
CCDC7-208ENST00000537047 TMEM232C9JQI7 657 aa6.36□□□□□ -1.39
CCDC7-208ENST00000537047 H3BNC9 293 aa6.36□□□□□ -1.39
CCDC7-208ENST00000537047 BTN3A1O00481 513 aa6.36□□□□□ -1.39
CCDC7-208ENST00000537047 AP1G1O43747 822 aa6.36□□□□□ -1.39
CCDC7-208ENST00000537047 PMPCBO75439 489 aa6.36□□□□□ -1.39
CCDC7-208ENST00000537047 A1BGP04217 495 aa6.36□□□□□ -1.39
CCDC7-208ENST00000537047 THP07101 528 aa6.36□□□□□ -1.39
CCDC7-208ENST00000537047 KITP10721 976 aa6.36□□□□□ -1.39
CCDC7-208ENST00000537047 MYCLP12524 364 aaPredicted RBP6.36□□□□□ -1.39
CCDC7-208ENST00000537047 NCLP19338 710 aaKnown RBP6.36□□□□□ -1.39
CCDC7-208ENST00000537047 GKP32189 559 aa6.36□□□□□ -1.39
CCDC7-208ENST00000537047 ARFIP2P53365 341 aa6.36□□□□□ -1.39
CCDC7-208ENST00000537047 COPB1P53618 953 aaKnown RBP6.36□□□□□ -1.39
CCDC7-208ENST00000537047 SATB1Q01826 763 aa6.36□□□□□ -1.39
CCDC7-208ENST00000537047 LMAN2Q12907 356 aa6.36□□□□□ -1.39
CCDC7-208ENST00000537047 IFIT1BQ5T764 474 aaKnown RBP6.36□□□□□ -1.39
CCDC7-208ENST00000537047 ZDHHC17Q8IUH5 632 aa6.36□□□□□ -1.39
CCDC7-208ENST00000537047 MPP5Q8N3R9 675 aa6.36□□□□□ -1.39
CCDC7-208ENST00000537047 SIRT6Q8N6T7 355 aa6.36□□□□□ -1.39
CCDC7-208ENST00000537047 C1GALT1C1Q96EU7 318 aa6.36□□□□□ -1.39
CCDC7-208ENST00000537047 TCF7L1Q9HCS4 588 aa6.36□□□□□ -1.39
CCDC7-208ENST00000537047 AASDHPPTQ9NRN7 309 aa6.36□□□□□ -1.39
CCDC7-208ENST00000537047 CNNM1Q9NRU3 951 aa6.36□□□□□ -1.39
CCDC7-208ENST00000537047 TMEM184CQ9NVA4 438 aa6.36□□□□□ -1.39
CCDC7-208ENST00000537047 PIH1D1Q9NWS0 290 aaKnown RBP6.36□□□□□ -1.39
CCDC7-208ENST00000537047 GABBR1Q9UBS5 961 aa6.36□□□□□ -1.39
CCDC7-208ENST00000537047 LRP12Q9Y561 859 aa6.36□□□□□ -1.39
CCDC7-208ENST00000537047 CCDC187A0A096LP49 1063 aa6.35□□□□□ -1.39
CCDC7-208ENST00000537047 HTR1BP28222 390 aa6.35□□□□□ -1.39
CCDC7-208ENST00000537047 NEK2P51955 445 aa6.35□□□□□ -1.39
CCDC7-208ENST00000537047 C10orf25Q5T742 122 aa6.35□□□□□ -1.39
CCDC7-208ENST00000537047 LMBRD2Q68DH5 695 aaPredicted RBP6.35□□□□□ -1.39
CCDC7-208ENST00000537047 ZDHHC24Q6UX98 284 aa6.35□□□□□ -1.39
CCDC7-208ENST00000537047 MRPL10Q7Z7H8 261 aaKnown RBP6.35□□□□□ -1.39
CCDC7-208ENST00000537047 ZNF398Q8TD17 642 aa6.35□□□□□ -1.39
CCDC7-208ENST00000537047 ADAMTS15Q8TE58 950 aa6.35□□□□□ -1.39
CCDC7-208ENST00000537047 PIGOQ8TEQ8 1089 aa6.35□□□□□ -1.39
CCDC7-208ENST00000537047 MAP4K1Q92918 833 aa6.35□□□□□ -1.39
CCDC7-208ENST00000537047 VCPIP1Q96JH7 1222 aa6.35□□□□□ -1.39
CCDC7-208ENST00000537047 NUP88Q99567 741 aaPredicted RBP6.35□□□□□ -1.39
CCDC7-208ENST00000537047 ZMAT3Q9HA38 289 aaKnown RBP6.35□□□□□ -1.39
CCDC7-208ENST00000537047 OFD1O75665 1012 aa6.34□□□□□ -1.39
CCDC7-208ENST00000537047 MYBP10242 640 aa6.34□□□□□ -1.39
CCDC7-208ENST00000537047 APEHP13798 732 aaKnown RBP6.34□□□□□ -1.39
CCDC7-208ENST00000537047 GHRHRQ02643 423 aa6.34□□□□□ -1.39
CCDC7-208ENST00000537047 KCTD20Q7Z5Y7 419 aa6.34□□□□□ -1.39
CCDC7-208ENST00000537047 SFTPA1Q8IWL2 248 aa6.34□□□□□ -1.39
CCDC7-208ENST00000537047 OSR1Q8TAX0 266 aaPredicted RBP6.34□□□□□ -1.39
CCDC7-208ENST00000537047 DNAJB14Q8TBM8 379 aa6.34□□□□□ -1.39
CCDC7-208ENST00000537047 CCDC17Q96LX7 622 aa6.34□□□□□ -1.39
CCDC7-208ENST00000537047 FYTTD1Q96QD9 318 aaKnown RBP6.34□□□□□ -1.39
CCDC7-208ENST00000537047 FOXP1Q9H334 677 aaPredicted RBP6.34□□□□□ -1.39
CCDC7-208ENST00000537047 SMURF2Q9HAU4 748 aa6.34□□□□□ -1.39
CCDC7-208ENST00000537047 DRG1Q9Y295 367 aaKnown RBP6.34□□□□□ -1.39
CCDC7-208ENST00000537047 ANKRD6Q9Y2G4 727 aa6.34□□□□□ -1.39
CCDC7-208ENST00000537047 MYMKA6NI61 221 aa6.33□□□□□ -1.4
CCDC7-208ENST00000537047 MT-CO3P00414 261 aa6.33□□□□□ -1.4
CCDC7-208ENST00000537047 XRCC6P12956 609 aaKnown RBP eCLIP6.33□□□□□ -1.4
CCDC7-208ENST00000537047 DIO1P49895 249 aa6.33□□□□□ -1.4
CCDC7-208ENST00000537047 ZNF91Q05481 1191 aa6.33□□□□□ -1.4
CCDC7-208ENST00000537047 ZNF783Q6ZMS7 281 aa6.33□□□□□ -1.4
CCDC7-208ENST00000537047 PIP4P1Q86T03 277 aa6.33□□□□□ -1.4
CCDC7-208ENST00000537047 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.33□□□□□ -1.4
CCDC7-208ENST00000537047 CTHRC1Q96CG8 243 aa6.33□□□□□ -1.4
CCDC7-208ENST00000537047 RSPRY1Q96DX4 576 aa6.33□□□□□ -1.4
CCDC7-208ENST00000537047 ADGRE3Q9BY15 652 aa6.33□□□□□ -1.4
CCDC7-208ENST00000537047 SPRY2O43597 315 aa6.32□□□□□ -1.4
CCDC7-208ENST00000537047 UBXN7O94888 489 aa6.32□□□□□ -1.4
CCDC7-208ENST00000537047 DCAF12L1Q5VU92 463 aa6.32□□□□□ -1.4
CCDC7-208ENST00000537047 DENND1CQ8IV53 801 aa6.32□□□□□ -1.4
CCDC7-208ENST00000537047 KBTBD7Q8WVZ9 684 aa6.32□□□□□ -1.4
CCDC7-208ENST00000537047 IGFBPL1Q8WX77 278 aa6.32□□□□□ -1.4
CCDC7-208ENST00000537047 MAML1Q92585 1016 aa6.32□□□□□ -1.4
CCDC7-208ENST00000537047 ZBTB45Q96K62 511 aaPredicted RBP6.32□□□□□ -1.4
CCDC7-208ENST00000537047 LRGUKQ96M69 825 aa6.32□□□□□ -1.4
CCDC7-208ENST00000537047 SIGLEC11Q96RL6 698 aa6.32□□□□□ -1.4
CCDC7-208ENST00000537047 BTBD19C9JJ37 291 aa6.31□□□□□ -1.4
CCDC7-208ENST00000537047 ABLIM3O94929 683 aa6.31□□□□□ -1.4
CCDC7-208ENST00000537047 CCKARP32238 428 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms