RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	BEAN1	Q3B7T3	259 aa		6.27	□□□□□ -1.41
PRKDC-208	ENST00000536710	ANKRD45	Q5TZF3	282 aa		6.27	□□□□□ -1.41
PRKDC-208	ENST00000536710	ERICH6B	Q5W0A0	696 aa		6.27	□□□□□ -1.41
PRKDC-208	ENST00000536710	SP5	Q6BEB4	398 aa	Predicted RBP	6.27	□□□□□ -1.41
PRKDC-208	ENST00000536710	ARMC6	Q6NXE6	501 aa		6.27	□□□□□ -1.41
PRKDC-208	ENST00000536710	C1orf210	Q8IVY1	113 aa		6.27	□□□□□ -1.41
PRKDC-208	ENST00000536710	SUGP1	Q8IWZ8	645 aa	Known RBP	6.27	□□□□□ -1.41
PRKDC-208	ENST00000536710	B3GALNT2	Q8NCR0	500 aa		6.27	□□□□□ -1.41
PRKDC-208	ENST00000536710	ABHD5	Q8WTS1	349 aa		6.27	□□□□□ -1.41
PRKDC-208	ENST00000536710	KLC2	Q9H0B6	622 aa		6.27	□□□□□ -1.41
PRKDC-208	ENST00000536710	ZCWPW1	Q9H0M4	648 aa		6.27	□□□□□ -1.41
PRKDC-208	ENST00000536710	UNKL	Q9H9P5	680 aa	Known RBP	6.27	□□□□□ -1.41
PRKDC-208	ENST00000536710	HELLS	Q9NRZ9	838 aa		6.27	□□□□□ -1.41
PRKDC-208	ENST00000536710	PARPBP	Q9NWS1	579 aa		6.27	□□□□□ -1.41
PRKDC-208	ENST00000536710	C9orf78	Q9NZ63	289 aa	Predicted RBP	6.27	□□□□□ -1.41
PRKDC-208	ENST00000536710	CA14	Q9ULX7	337 aa		6.27	□□□□□ -1.41
PRKDC-208	ENST00000536710	DTNA	Q9Y4J8	743 aa		6.27	□□□□□ -1.41
PRKDC-208	ENST00000536710	SNX14	Q9Y5W7	946 aa		6.27	□□□□□ -1.41
PRKDC-208	ENST00000536710	MARCH11	A6NNE9	402 aa		6.26	□□□□□ -1.41
PRKDC-208	ENST00000536710	DNPH1	O43598	174 aa		6.26	□□□□□ -1.41
PRKDC-208	ENST00000536710	PDHA1	P08559	390 aa		6.26	□□□□□ -1.41
PRKDC-208	ENST00000536710	AR	P10275	920 aa		6.26	□□□□□ -1.41
PRKDC-208	ENST00000536710	PPP3CB	P16298	524 aa		6.26	□□□□□ -1.41
PRKDC-208	ENST00000536710	LAG3	P18627	525 aa		6.26	□□□□□ -1.41
PRKDC-208	ENST00000536710	EPHA3	P29320	983 aa		6.26	□□□□□ -1.41
PRKDC-208	ENST00000536710	SLC5A2	P31639	672 aa		6.26	□□□□□ -1.41
PRKDC-208	ENST00000536710	UQCRC1	P31930	480 aa		6.26	□□□□□ -1.41
PRKDC-208	ENST00000536710	GATM	P50440	423 aa		6.26	□□□□□ -1.41
PRKDC-208	ENST00000536710	BCAT1	P54687	386 aa		6.26	□□□□□ -1.41
PRKDC-208	ENST00000536710	POLE2	P56282	527 aa		6.26	□□□□□ -1.41
PRKDC-208	ENST00000536710	ATPAF1	Q5TC12	328 aa	Predicted RBP	6.26	□□□□□ -1.41
PRKDC-208	ENST00000536710	ABLIM2	Q6H8Q1	611 aa		6.26	□□□□□ -1.41
PRKDC-208	ENST00000536710	CCDC70	Q6NSX1	233 aa		6.26	□□□□□ -1.41
PRKDC-208	ENST00000536710	CLEC9A	Q6UXN8	241 aa		6.26	□□□□□ -1.41
PRKDC-208	ENST00000536710	TTC30A	Q86WT1	665 aa		6.26	□□□□□ -1.41
PRKDC-208	ENST00000536710	ABRA	Q8N0Z2	381 aa		6.26	□□□□□ -1.41
PRKDC-208	ENST00000536710	FSTL5	Q8N475	847 aa	Predicted RBP	6.26	□□□□□ -1.41
PRKDC-208	ENST00000536710	SLC30A5	Q8TAD4	765 aa		6.26	□□□□□ -1.41
PRKDC-208	ENST00000536710	STT3B	Q8TCJ2	826 aa		6.26	□□□□□ -1.41
PRKDC-208	ENST00000536710	PNISR	Q8TF01	805 aa	Known RBP	6.26	□□□□□ -1.41
PRKDC-208	ENST00000536710	ATG4A	Q8WYN0	398 aa		6.26	□□□□□ -1.41
PRKDC-208	ENST00000536710	EID2B	Q96D98	161 aa		6.26	□□□□□ -1.41
PRKDC-208	ENST00000536710	C8orf49	Q96NF6	230 aa		6.26	□□□□□ -1.41
PRKDC-208	ENST00000536710	C17orf80	Q9BSJ5	609 aa		6.26	□□□□□ -1.41
PRKDC-208	ENST00000536710	AMBRA1	Q9C0C7	1298 aa		6.26	□□□□□ -1.41
PRKDC-208	ENST00000536710	MLXIP	Q9HAP2	919 aa		6.26	□□□□□ -1.41
PRKDC-208	ENST00000536710	TES	Q9UGI8	421 aa	Known RBP	6.26	□□□□□ -1.41
PRKDC-208	ENST00000536710	USP22	Q9UPT9	525 aa		6.26	□□□□□ -1.41
PRKDC-208	ENST00000536710		J3KTA2	159 aa		6.25	□□□□□ -1.41
PRKDC-208	ENST00000536710	PCDH17	O14917	1159 aa		6.25	□□□□□ -1.41
PRKDC-208	ENST00000536710	ACTL6B	O94805	426 aa		6.25	□□□□□ -1.41
PRKDC-208	ENST00000536710	SP2	Q02086	613 aa		6.25	□□□□□ -1.41
PRKDC-208	ENST00000536710	ATP1A4	Q13733	1029 aa		6.25	□□□□□ -1.41
PRKDC-208	ENST00000536710	LY6K	Q17RY6	165 aa		6.25	□□□□□ -1.41
PRKDC-208	ENST00000536710	P3H1	Q32P28	736 aa		6.25	□□□□□ -1.41
PRKDC-208	ENST00000536710	USP39	Q53GS9	565 aa	Known RBP	6.25	□□□□□ -1.41
PRKDC-208	ENST00000536710	RINT1	Q6NUQ1	792 aa		6.25	□□□□□ -1.41
PRKDC-208	ENST00000536710	IZUMO1	Q8IYV9	350 aa		6.25	□□□□□ -1.41
PRKDC-208	ENST00000536710	C11orf44	Q8N8P7	122 aa		6.25	□□□□□ -1.41
PRKDC-208	ENST00000536710	TOR1AIP2	Q8NFQ8	470 aa		6.25	□□□□□ -1.41
PRKDC-208	ENST00000536710	SLC25A43	Q8WUT9	341 aa	Predicted RBP	6.25	□□□□□ -1.41
PRKDC-208	ENST00000536710	EXTL1	Q92935	676 aa		6.25	□□□□□ -1.41
PRKDC-208	ENST00000536710	PTCD3	Q96EY7	689 aa	Known RBP	6.25	□□□□□ -1.41
PRKDC-208	ENST00000536710	INO80B	Q9C086	356 aa	Predicted RBP	6.25	□□□□□ -1.41
PRKDC-208	ENST00000536710	UBA5	Q9GZZ9	404 aa		6.25	□□□□□ -1.41
PRKDC-208	ENST00000536710	CASS4	Q9NQ75	786 aa		6.25	□□□□□ -1.41
PRKDC-208	ENST00000536710	TMEM74B	Q9NUR3	256 aa		6.25	□□□□□ -1.41
PRKDC-208	ENST00000536710	LZTS1	Q9Y250	596 aa		6.25	□□□□□ -1.41
PRKDC-208	ENST00000536710	PNMA6E	A0A0J9YXQ4	647 aa		6.24	□□□□□ -1.41
PRKDC-208	ENST00000536710	BTBD11	A6QL63	1104 aa		6.24	□□□□□ -1.41
PRKDC-208	ENST00000536710	AGPS	O00116	658 aa		6.24	□□□□□ -1.41
PRKDC-208	ENST00000536710	EIF3F	O00303	357 aa	Predicted RBP	6.24	□□□□□ -1.41
PRKDC-208	ENST00000536710	NTSR2	O95665	410 aa		6.24	□□□□□ -1.41
PRKDC-208	ENST00000536710	KLRK1	P26718	216 aa		6.24	□□□□□ -1.41
PRKDC-208	ENST00000536710	RBL1	P28749	1068 aa		6.24	□□□□□ -1.41
PRKDC-208	ENST00000536710	AP2B1	P63010	937 aa		6.24	□□□□□ -1.41
PRKDC-208	ENST00000536710	GUCY1B3	Q02153	619 aa		6.24	□□□□□ -1.41
PRKDC-208	ENST00000536710	TRIM71	Q2Q1W2	868 aa	Known RBP	6.24	□□□□□ -1.41
PRKDC-208	ENST00000536710	ADCK5	Q3MIX3	580 aa		6.24	□□□□□ -1.41
PRKDC-208	ENST00000536710	NRN1L	Q496H8	165 aa		6.24	□□□□□ -1.41
PRKDC-208	ENST00000536710	TIGD2	Q4W5G0	525 aa		6.24	□□□□□ -1.41
PRKDC-208	ENST00000536710	SLC9A4	Q6AI14	798 aa		6.24	□□□□□ -1.41
PRKDC-208	ENST00000536710	TANGO2	Q6ICL3	276 aa		6.24	□□□□□ -1.41
PRKDC-208	ENST00000536710	MMS22L	Q6ZRQ5	1243 aa		6.24	□□□□□ -1.41
PRKDC-208	ENST00000536710	NRSN1	Q8IZ57	195 aa		6.24	□□□□□ -1.41
PRKDC-208	ENST00000536710	SYNE4	Q8N205	404 aa		6.24	□□□□□ -1.41
PRKDC-208	ENST00000536710	FAM109A	Q8N4B1	249 aa		6.24	□□□□□ -1.41
PRKDC-208	ENST00000536710	OR1N1	Q8NGS0	311 aa		6.24	□□□□□ -1.41
PRKDC-208	ENST00000536710	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	6.24	□□□□□ -1.41
PRKDC-208	ENST00000536710	IL17D	Q8TAD2	202 aa		6.24	□□□□□ -1.41
PRKDC-208	ENST00000536710	OTUD7A	Q8TE49	926 aa	Predicted RBP	6.24	□□□□□ -1.41
PRKDC-208	ENST00000536710	ADAM2	Q99965	735 aa		6.24	□□□□□ -1.41
PRKDC-208	ENST00000536710	RTKN	Q9BST9	563 aa		6.24	□□□□□ -1.41
PRKDC-208	ENST00000536710	BRD8	Q9H0E9	1235 aa		6.24	□□□□□ -1.41
PRKDC-208	ENST00000536710	GLOD4	Q9HC38	313 aa		6.24	□□□□□ -1.41
PRKDC-208	ENST00000536710	SAYSD1	Q9NPB0	183 aa		6.24	□□□□□ -1.41
PRKDC-208	ENST00000536710	TBCCD1	Q9NVR7	557 aa		6.24	□□□□□ -1.41
PRKDC-208	ENST00000536710	SMPD4	Q9NXE4	827 aa		6.24	□□□□□ -1.41
PRKDC-208	ENST00000536710	KIF17	Q9P2E2	1029 aa		6.24	□□□□□ -1.41
PRKDC-208	ENST00000536710	LPAR3	Q9UBY5	353 aa		6.24	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms